RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SLC15A2Q16348 729 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 ERO1AQ96HE7 468 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 TMX3Q96JJ7 454 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 DCTPP1Q9H773 170 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 BRMS1Q9HCU9 246 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 FAM177BA6PVY3 158 aa12.63□□□□□ -0.39
NIF3L1-204ENST00000409357 KIF2AO00139 706 aaPredicted RBP12.63□□□□□ -0.39
NIF3L1-204ENST00000409357 NEMFO60524 1076 aa12.63□□□□□ -0.39
NIF3L1-204ENST00000409357 PHKG2P15735 406 aa12.63□□□□□ -0.39
NIF3L1-204ENST00000409357 SPG7Q9UQ90 795 aa12.63□□□□□ -0.39
NIF3L1-204ENST00000409357 CCDC171Q6TFL3 1326 aa12.63□□□□□ -0.39
NIF3L1-204ENST00000409357 KDRP35968 1356 aa12.63□□□□□ -0.39
NIF3L1-204ENST00000409357 RPAP1Q9BWH6 1393 aaPredicted RBP12.63□□□□□ -0.39
NIF3L1-204ENST00000409357 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 CLGNO14967 610 aa12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 ZBTB7AO95365 584 aa12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 TUBB4AP04350 444 aa12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 C17orf53Q8N3J3 647 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 TXLNBQ8N3L3 684 aa12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 STK32BQ9NY57 414 aa12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 RRP7AQ9Y3A4 280 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
NIF3L1-204ENST00000409357 KDM6AO15550 1401 aaPredicted RBP12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 ABCC4O15439 1325 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 SULT6B1Q6IMI4 303 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 USP48Q86UV5 1035 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 PIGBQ92521 554 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 PALLDQ8WX93 1383 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 ERC2O15083 957 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 TNNT1P13805 278 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 BRD2P25440 801 aaKnown RBP12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 CDC25BP30305 580 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 NOP2P46087 812 aaKnown RBP12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 HNRNPH2P55795 449 aaKnown RBP12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 NEUROD2Q15784 382 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 NOL10Q9BSC4 688 aaKnown RBP12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 ATP6V1DQ9Y5K8 247 aa12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 V9GYY5 206 aaPredicted RBP12.61□□□□□ -0.39
NIF3L1-204ENST00000409357 HTATSF1O43719 755 aaKnown RBP12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 HMOX1P09601 288 aa12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 TMPOP42166 694 aaKnown RBP12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 KMT5BQ4FZB7 885 aa12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 TEX35Q5T0J7 233 aa12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 SIRT2Q8IXJ6 389 aa12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 RASSF4Q9H2L5 321 aa12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 OSBPL3Q9H4L5 887 aa12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
NIF3L1-204ENST00000409357 CAVIN2O95810 425 aa12.59□□□□□ -0.39
NIF3L1-204ENST00000409357 H2AFXP16104 143 aaPredicted RBP12.59□□□□□ -0.39
NIF3L1-204ENST00000409357 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
NIF3L1-204ENST00000409357 SCN11AQ9UI33 1791 aa12.59□□□□□ -0.39
NIF3L1-204ENST00000409357 ELP1O95163 1332 aa12.58□□□□□ -0.39
NIF3L1-204ENST00000409357 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
NIF3L1-204ENST00000409357 PTGER2P43116 358 aa12.58□□□□□ -0.4
NIF3L1-204ENST00000409357 RAD51AP2Q09MP3 1159 aa12.58□□□□□ -0.4
NIF3L1-204ENST00000409357 ZNF530Q6P9A1 599 aaPredicted RBP12.58□□□□□ -0.4
NIF3L1-204ENST00000409357 FAM200AQ8TCP9 573 aa12.58□□□□□ -0.4
NIF3L1-204ENST00000409357 SSUH2Q9Y2M2 353 aa12.58□□□□□ -0.4
NIF3L1-204ENST00000409357 PLEKHG2Q9H7P9 1386 aa12.58□□□□□ -0.4
NIF3L1-204ENST00000409357 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
NIF3L1-204ENST00000409357 GADD45BO75293 160 aaPredicted RBP12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 CCDC192P0DO97 292 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 TPM4P67936 248 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 IQUBQ8NA54 791 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 SECISBP2LQ93073 1101 aaKnown RBP12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 SPON1Q9HCB6 807 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 PSD3Q9NYI0 1048 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 AP5Z1O43299 807 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 MCCP23508 829 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 PSEN1P49768 467 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 NYAP1Q6ZVC0 841 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 AMIGO3Q86WK7 504 aa12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 ZNF622Q969S3 477 aaKnown RBP eCLIP12.57□□□□□ -0.4
NIF3L1-204ENST00000409357 UBR3Q6ZT12 1888 aa12.56□□□□□ -0.4
NIF3L1-204ENST00000409357 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
NIF3L1-204ENST00000409357 PLEKHO1Q53GL0 409 aaPredicted RBP12.56□□□□□ -0.4
NIF3L1-204ENST00000409357 CEP135Q66GS9 1140 aa12.56□□□□□ -0.4
NIF3L1-204ENST00000409357 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
NIF3L1-204ENST00000409357 RPAP2Q8IXW5 612 aaPredicted RBP12.56□□□□□ -0.4
NIF3L1-204ENST00000409357 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
NIF3L1-204ENST00000409357 UBXN6Q9BZV1 441 aa12.56□□□□□ -0.4
NIF3L1-204ENST00000409357 TMOD3Q9NYL9 352 aa12.56□□□□□ -0.4
NIF3L1-204ENST00000409357 CWC15Q9P013 229 aaKnown RBP12.56□□□□□ -0.4
NIF3L1-204ENST00000409357 SDSP20132 328 aa12.55□□□□□ -0.4
NIF3L1-204ENST00000409357 GPS2Q13227 327 aa12.55□□□□□ -0.4
NIF3L1-204ENST00000409357 COL24A1Q17RW2 1714 aa12.55□□□□□ -0.4
NIF3L1-204ENST00000409357 ZSCAN25Q6NSZ9 544 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms