RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CCDC24Q8N4L8 307 aa20.9■□□□□ 0.94
SSB-202ENST00000409333 PDGFDQ9GZP0 370 aaPredicted RBP20.9■□□□□ 0.94
SSB-202ENST00000409333 NUCB1Q02818 461 aa20.9■□□□□ 0.94
SSB-202ENST00000409333 ANKRD45Q5TZF3 282 aa20.9■□□□□ 0.94
SSB-202ENST00000409333 MSL1Q68DK7 614 aa20.9■□□□□ 0.94
SSB-202ENST00000409333 ILDR2Q71H61 639 aa20.9■□□□□ 0.94
SSB-202ENST00000409333 NLGN1Q8N2Q7 840 aa20.9■□□□□ 0.94
SSB-202ENST00000409333 POLRMTO00411 1230 aaKnown RBP20.89■□□□□ 0.93
SSB-202ENST00000409333 GREM2Q9H772 168 aa20.89■□□□□ 0.93
SSB-202ENST00000409333 COL4A1P02462 1669 aa20.89■□□□□ 0.93
SSB-202ENST00000409333 PTPN12Q05209 780 aaKnown RBP20.88■□□□□ 0.93
SSB-202ENST00000409333 C3orf67Q6ZVT6 689 aa20.88■□□□□ 0.93
SSB-202ENST00000409333 CNBD1Q8NA66 436 aa20.88■□□□□ 0.93
SSB-202ENST00000409333 LNPKQ9C0E8 428 aa20.88■□□□□ 0.93
SSB-202ENST00000409333 NOP58Q9Y2X3 529 aaKnown RBP20.88■□□□□ 0.93
SSB-202ENST00000409333 SMARCA5O60264 1052 aaPredicted RBP20.87■□□□□ 0.93
SSB-202ENST00000409333 SERPINB2P05120 415 aa20.87■□□□□ 0.93
SSB-202ENST00000409333 SLC10A5Q5PT55 438 aa20.87■□□□□ 0.93
SSB-202ENST00000409333 PRR5LQ6MZQ0 368 aa20.87■□□□□ 0.93
SSB-202ENST00000409333 CHD1LQ86WJ1 897 aa20.87■□□□□ 0.93
SSB-202ENST00000409333 SIL1Q9H173 461 aa20.87■□□□□ 0.93
SSB-202ENST00000409333 COPRSQ9NQ92 184 aa20.87■□□□□ 0.93
SSB-202ENST00000409333 NPHP1O15259 732 aa20.87■□□□□ 0.93
SSB-202ENST00000409333 HSP90B1P14625 803 aaKnown RBP20.87■□□□□ 0.93
SSB-202ENST00000409333 ZNF594Q96JF6 807 aaPredicted RBP20.87■□□□□ 0.93
SSB-202ENST00000409333 LRP5O75197 1615 aa20.86■□□□□ 0.93
SSB-202ENST00000409333 A0A1B0GUL6 1792 aa20.86■□□□□ 0.93
SSB-202ENST00000409333 CCDC57Q2TAC2 916 aa20.86■□□□□ 0.93
SSB-202ENST00000409333 ITGA6P23229 1130 aa20.85■□□□□ 0.93
SSB-202ENST00000409333 BCL11AQ9H165 835 aa20.85■□□□□ 0.93
SSB-202ENST00000409333 MMP10P09238 476 aa20.85■□□□□ 0.93
SSB-202ENST00000409333 PDE4AP27815 886 aa20.85■□□□□ 0.93
SSB-202ENST00000409333 RGS3P49796 1198 aa20.85■□□□□ 0.93
SSB-202ENST00000409333 IFIT5Q13325 482 aaKnown RBP20.85■□□□□ 0.93
SSB-202ENST00000409333 OS9Q13438 667 aaPredicted RBP20.85■□□□□ 0.93
SSB-202ENST00000409333 LRRCC1Q9C099 1032 aa20.85■□□□□ 0.93
SSB-202ENST00000409333 RIC1Q4ADV7 1423 aa20.84■□□□□ 0.93
SSB-202ENST00000409333 RAB11FIP3O75154 756 aa20.84■□□□□ 0.93
SSB-202ENST00000409333 CCDC152Q4G0S7 254 aa20.84■□□□□ 0.93
SSB-202ENST00000409333 HSP90AB4PQ58FF6 505 aa20.84■□□□□ 0.93
SSB-202ENST00000409333 G3BP1Q13283 466 aaKnown RBP eCLIP20.83■□□□□ 0.931e-6■□□□□ 10
SSB-202ENST00000409333 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
SSB-202ENST00000409333 COL11A2P13942 1736 aaPredicted RBP20.83■□□□□ 0.92
SSB-202ENST00000409333 RTL9Q8NET4 1388 aa20.83■□□□□ 0.92
SSB-202ENST00000409333 CACNA1SQ13698 1873 aa20.83■□□□□ 0.92
SSB-202ENST00000409333 ANKRD18BA2A2Z9 1011 aa20.82■□□□□ 0.92
SSB-202ENST00000409333 ST5P78524 1137 aa20.82■□□□□ 0.92
SSB-202ENST00000409333 SF3B3Q15393 1217 aaKnown RBP20.82■□□□□ 0.92
SSB-202ENST00000409333 SEC31BQ9NQW1 1179 aa20.82■□□□□ 0.92
SSB-202ENST00000409333 SASH1O94885 1247 aa20.82■□□□□ 0.92
SSB-202ENST00000409333 KIF1BPQ96EK5 621 aa20.82■□□□□ 0.92
SSB-202ENST00000409333 NLRP3Q96P20 1036 aa20.82■□□□□ 0.92
SSB-202ENST00000409333 PARP3Q9Y6F1 533 aa20.82■□□□□ 0.92
SSB-202ENST00000409333 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.82■□□□□ 0.92
SSB-202ENST00000409333 TAF7LQ5H9L4 462 aa20.81■□□□□ 0.92
SSB-202ENST00000409333 ERC1Q8IUD2 1116 aa20.81■□□□□ 0.92
SSB-202ENST00000409333 PUS3Q9BZE2 481 aaKnown RBP20.81■□□□□ 0.92
SSB-202ENST00000409333 IL1RAPL2Q9NP60 686 aa20.81■□□□□ 0.92
SSB-202ENST00000409333 ZBTB47Q9UFB7 747 aaPredicted RBP20.81■□□□□ 0.92
SSB-202ENST00000409333 LRRC24Q50LG9 513 aa20.8■□□□□ 0.92
SSB-202ENST00000409333 ATG9AQ7Z3C6 839 aa20.8■□□□□ 0.92
SSB-202ENST00000409333 C16orf71Q8IYS4 520 aaPredicted RBP20.8■□□□□ 0.92
SSB-202ENST00000409333 EYA2O00167 538 aa20.8■□□□□ 0.92
SSB-202ENST00000409333 R3HDM1Q15032 1099 aaKnown RBP20.79■□□□□ 0.92
SSB-202ENST00000409333 OTUD7AQ8TE49 926 aaPredicted RBP20.79■□□□□ 0.92
SSB-202ENST00000409333 CIAO1O76071 339 aa20.77■□□□□ 0.92
SSB-202ENST00000409333 SLC16A10Q8TF71 515 aa20.77■□□□□ 0.92
SSB-202ENST00000409333 IL15P40933 162 aaPredicted RBP20.77■□□□□ 0.91
SSB-202ENST00000409333 TFCP2Q12800 502 aa20.77■□□□□ 0.91
SSB-202ENST00000409333 LDHAL6AQ6ZMR3 332 aa20.77■□□□□ 0.91
SSB-202ENST00000409333 FBXO3Q9UK99 471 aa20.76■□□□□ 0.91
SSB-202ENST00000409333 AK9Q5TCS8 1911 aa20.76■□□□□ 0.91
SSB-202ENST00000409333 KIF13BQ9NQT8 1826 aa20.76■□□□□ 0.91
SSB-202ENST00000409333 ARAP2Q8WZ64 1704 aa20.75■□□□□ 0.91
SSB-202ENST00000409333 CRY2Q49AN0 593 aa20.74■□□□□ 0.91
SSB-202ENST00000409333 PLEKHM2Q8IWE5 1019 aa20.74■□□□□ 0.91
SSB-202ENST00000409333 CELF1Q92879 486 aaKnown RBP20.74■□□□□ 0.91
SSB-202ENST00000409333 CDC5LQ99459 802 aaKnown RBP20.74■□□□□ 0.91
SSB-202ENST00000409333 CNNM1Q9NRU3 951 aa20.74■□□□□ 0.91
SSB-202ENST00000409333 RIPOR2Q9Y4F9 1068 aa20.74■□□□□ 0.91
SSB-202ENST00000409333 SALL3Q9BXA9 1300 aa20.74■□□□□ 0.91
SSB-202ENST00000409333 PSDA5PKW4 1024 aaPredicted RBP20.74■□□□□ 0.91
SSB-202ENST00000409333 ZBTB7AO95365 584 aa20.74■□□□□ 0.91
SSB-202ENST00000409333 IGHMBP2P38935 993 aaKnown RBP20.74■□□□□ 0.91
SSB-202ENST00000409333 CLASRPQ8N2M8 674 aaKnown RBP20.74■□□□□ 0.91
SSB-202ENST00000409333 DLEC1Q9Y238 1755 aa20.74■□□□□ 0.91
SSB-202ENST00000409333 EAF2Q96CJ1 260 aaPredicted RBP20.73■□□□□ 0.91
SSB-202ENST00000409333 MPHOSPH8Q99549 860 aa20.73■□□□□ 0.91
SSB-202ENST00000409333 BRIP1Q9BX63 1249 aa20.73■□□□□ 0.91
SSB-202ENST00000409333 KLRG2A4D1S0 409 aaPredicted RBP20.72■□□□□ 0.91
SSB-202ENST00000409333 DDX46Q7L014 1031 aaKnown RBP20.72■□□□□ 0.91
SSB-202ENST00000409333 ANKRD18AQ8IVF6 992 aa20.72■□□□□ 0.91
SSB-202ENST00000409333 ZNF609O15014 1411 aa20.72■□□□□ 0.91
SSB-202ENST00000409333 AACSQ86V21 672 aa20.72■□□□□ 0.91
SSB-202ENST00000409333 RPGRQ92834 1020 aaKnown RBP20.72■□□□□ 0.91
SSB-202ENST00000409333 TNNI3KQ59H18 835 aa20.71■□□□□ 0.91
SSB-202ENST00000409333 METTL24Q5JXM2 366 aa20.71■□□□□ 0.91
SSB-202ENST00000409333 FPGT-TNNI3KV9GXZ4 949 aa20.71■□□□□ 0.91
SSB-202ENST00000409333 LRRC37AA6NMS7 1700 aa20.71■□□□□ 0.91
SSB-202ENST00000409333 MX1P20591 662 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms