RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 LRRFIP2Q9Y608 721 aaKnown RBP16.28■□□□□ 0.2
LIMS2-203ENST00000409254 TAF1P21675 1872 aa16.28■□□□□ 0.2
LIMS2-203ENST00000409254 NUTM1Q86Y26 1132 aa16.27■□□□□ 0.2
LIMS2-203ENST00000409254 ANKRD44Q8N8A2 993 aa16.27■□□□□ 0.2
LIMS2-203ENST00000409254 EXOC6Q8TAG9 804 aa16.27■□□□□ 0.2
LIMS2-203ENST00000409254 BICC1Q9H694 974 aaKnown RBP16.27■□□□□ 0.2
LIMS2-203ENST00000409254 HOXA10P31260 410 aaPredicted RBP16.26■□□□□ 0.19
LIMS2-203ENST00000409254 CEP85Q6P2H3 762 aa16.26■□□□□ 0.19
LIMS2-203ENST00000409254 TTLL11Q8NHH1 800 aa16.26■□□□□ 0.19
LIMS2-203ENST00000409254 CD2APQ9Y5K6 639 aa16.26■□□□□ 0.19
LIMS2-203ENST00000409254 HDAC1Q13547 482 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-203ENST00000409254 TMC4Q7Z404 712 aa16.25■□□□□ 0.19
LIMS2-203ENST00000409254 SSH3Q8TE77 659 aa16.25■□□□□ 0.19
LIMS2-203ENST00000409254 TGFB2P61812 414 aa16.24■□□□□ 0.19
LIMS2-203ENST00000409254 ATP8B2P98198 1209 aa16.24■□□□□ 0.19
LIMS2-203ENST00000409254 POLA2Q14181 598 aa16.24■□□□□ 0.19
LIMS2-203ENST00000409254 CDC5LQ99459 802 aaKnown RBP16.24■□□□□ 0.19
LIMS2-203ENST00000409254 ARAP2Q8WZ64 1704 aa16.24■□□□□ 0.19
LIMS2-203ENST00000409254 LTBP1Q14766 1721 aa16.23■□□□□ 0.19
LIMS2-203ENST00000409254 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
LIMS2-203ENST00000409254 HCLS1P14317 486 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-203ENST00000409254 NPR1P16066 1061 aa16.23■□□□□ 0.19
LIMS2-203ENST00000409254 IFIT5Q13325 482 aaKnown RBP16.23■□□□□ 0.19
LIMS2-203ENST00000409254 CCDC57Q2TAC2 916 aa16.23■□□□□ 0.19
LIMS2-203ENST00000409254 LMBR1LQ6UX01 489 aa16.23■□□□□ 0.19
LIMS2-203ENST00000409254 CRAMP1Q96RY5 1269 aa16.23■□□□□ 0.19
LIMS2-203ENST00000409254 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-203ENST00000409254 SLX4Q8IY92 1834 aa16.22■□□□□ 0.19
LIMS2-203ENST00000409254 SRGNP10124 158 aa16.22■□□□□ 0.19
LIMS2-203ENST00000409254 HSP90AB4PQ58FF6 505 aa16.22■□□□□ 0.19
LIMS2-203ENST00000409254 RTL5Q5HYW3 569 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-203ENST00000409254 EPHA10Q5JZY3 1008 aa16.22■□□□□ 0.19
LIMS2-203ENST00000409254 STYK1Q6J9G0 422 aa16.22■□□□□ 0.19
LIMS2-203ENST00000409254 SYNE4Q8N205 404 aa16.22■□□□□ 0.19
LIMS2-203ENST00000409254 COPRSQ9NQ92 184 aa16.22■□□□□ 0.19
LIMS2-203ENST00000409254 ANKRD18BA2A2Z9 1011 aa16.21■□□□□ 0.19
LIMS2-203ENST00000409254 SRGAP3O43295 1099 aa16.21■□□□□ 0.19
LIMS2-203ENST00000409254 RPGRQ92834 1020 aaKnown RBP16.21■□□□□ 0.19
LIMS2-203ENST00000409254 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
LIMS2-203ENST00000409254 H0YIN7 160 aa16.2■□□□□ 0.18
LIMS2-203ENST00000409254 CIAO1O76071 339 aa16.2■□□□□ 0.18
LIMS2-203ENST00000409254 ITGA6P23229 1130 aa16.2■□□□□ 0.18
LIMS2-203ENST00000409254 ALDH1B1P30837 517 aa16.2■□□□□ 0.18
LIMS2-203ENST00000409254 IRX6P78412 446 aaPredicted RBP16.2■□□□□ 0.18
LIMS2-203ENST00000409254 FAM161AQ3B820 660 aa16.2■□□□□ 0.18
LIMS2-203ENST00000409254 DDX46Q7L014 1031 aaKnown RBP16.2■□□□□ 0.18
LIMS2-203ENST00000409254 RBM17Q96I25 401 aaKnown RBP16.2■□□□□ 0.18
LIMS2-203ENST00000409254 GREM2Q9H772 168 aa16.2■□□□□ 0.18
LIMS2-203ENST00000409254 NOP58Q9Y2X3 529 aaKnown RBP16.2■□□□□ 0.18
LIMS2-203ENST00000409254 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
LIMS2-203ENST00000409254 GOLGB1Q14789 3259 aaKnown RBP16.2■□□□□ 0.18
LIMS2-203ENST00000409254 FER1L6Q2WGJ9 1857 aa16.2■□□□□ 0.18
LIMS2-203ENST00000409254 RFX5P48382 616 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-203ENST00000409254 GRAPQ13588 217 aa16.19■□□□□ 0.18
LIMS2-203ENST00000409254 GRIPAP1Q4V328 841 aa16.19■□□□□ 0.18
LIMS2-203ENST00000409254 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-203ENST00000409254 CNKSR1Q969H4 720 aa16.19■□□□□ 0.18
LIMS2-203ENST00000409254 RWDD1Q9H446 243 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-203ENST00000409254 C1orf115Q9H7X2 142 aa16.19■□□□□ 0.18
LIMS2-203ENST00000409254 PPP4R2Q9NY27 417 aa16.19■□□□□ 0.18
LIMS2-203ENST00000409254 MYH13Q9UKX3 1938 aa16.18■□□□□ 0.18
LIMS2-203ENST00000409254 PNMA6EA0A0J9YXQ4 647 aa16.18■□□□□ 0.18
LIMS2-203ENST00000409254 BBOX1O75936 387 aa16.18■□□□□ 0.18
LIMS2-203ENST00000409254 PTPN12Q05209 780 aaKnown RBP16.18■□□□□ 0.18
LIMS2-203ENST00000409254 ERC1Q8IUD2 1116 aa16.18■□□□□ 0.18
LIMS2-203ENST00000409254 SIRT2Q8IXJ6 389 aa16.18■□□□□ 0.18
LIMS2-203ENST00000409254 JARID2Q92833 1246 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-203ENST00000409254 GCC1Q96CN9 775 aa16.18■□□□□ 0.18
LIMS2-203ENST00000409254 IGHMBP2P38935 993 aaKnown RBP16.17■□□□□ 0.18
LIMS2-203ENST00000409254 C3orf67Q6ZVT6 689 aa16.17■□□□□ 0.18
LIMS2-203ENST00000409254 ANKRD18AQ8IVF6 992 aa16.17■□□□□ 0.18
LIMS2-203ENST00000409254 BSDC1Q9NW68 430 aaPredicted RBP16.17■□□□□ 0.18
LIMS2-203ENST00000409254 COL4A1P02462 1669 aa16.16■□□□□ 0.18
LIMS2-203ENST00000409254 RAB11FIP3O75154 756 aa16.16■□□□□ 0.18
LIMS2-203ENST00000409254 RPS8P62241 208 aaKnown RBP16.16■□□□□ 0.18
LIMS2-203ENST00000409254 TAF7LQ5H9L4 462 aa16.16■□□□□ 0.18
LIMS2-203ENST00000409254 CC2D2BQ6DHV5 1058 aa16.16■□□□□ 0.18
LIMS2-203ENST00000409254 C2CD5Q86YS7 1000 aa16.16■□□□□ 0.18
LIMS2-203ENST00000409254 DCTPP1Q9H773 170 aa16.16■□□□□ 0.18
LIMS2-203ENST00000409254 CHMP3Q9Y3E7 222 aa16.16■□□□□ 0.18
LIMS2-203ENST00000409254 DICER1Q9UPY3 1922 aaKnown RBP16.15■□□□□ 0.18
LIMS2-203ENST00000409254 IL15P40933 162 aaPredicted RBP16.15■□□□□ 0.18
LIMS2-203ENST00000409254 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
LIMS2-203ENST00000409254 SMC5Q8IY18 1101 aa16.15■□□□□ 0.18
LIMS2-203ENST00000409254 MPHOSPH8Q99549 860 aa16.15■□□□□ 0.18
LIMS2-203ENST00000409254 MROH5Q6ZUA9 1318 aa16.15■□□□□ 0.18
LIMS2-203ENST00000409254 CHD4Q14839 1912 aa16.14■□□□□ 0.17
LIMS2-203ENST00000409254 EYA2O00167 538 aa16.14■□□□□ 0.17
LIMS2-203ENST00000409254 CENPQQ7L2Z9 268 aaPredicted RBP16.14■□□□□ 0.17
LIMS2-203ENST00000409254 SNED1Q8TER0 1413 aa16.13■□□□□ 0.17
LIMS2-203ENST00000409254 PSME4Q14997 1843 aa16.13■□□□□ 0.17
LIMS2-203ENST00000409254 LDHAL6AQ6ZMR3 332 aa16.13■□□□□ 0.17
LIMS2-203ENST00000409254 CCDC24Q8N4L8 307 aa16.13■□□□□ 0.17
LIMS2-203ENST00000409254 TTLL6Q8N841 843 aa16.13■□□□□ 0.17
LIMS2-203ENST00000409254 GPR108Q9NPR9 543 aa16.13■□□□□ 0.17
LIMS2-203ENST00000409254 PIM2Q9P1W9 311 aa16.13■□□□□ 0.17
LIMS2-203ENST00000409254 PPP1R1BQ9UD71 204 aaPredicted RBP16.13■□□□□ 0.17
LIMS2-203ENST00000409254 KDM2BQ8NHM5 1336 aa16.13■□□□□ 0.17
LIMS2-203ENST00000409254 KCNA3P22001 575 aa16.12■□□□□ 0.17
LIMS2-203ENST00000409254 G3BP1Q13283 466 aaKnown RBP eCLIP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms