RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 ADRA2BP18089 450 aa10.11□□□□□ -0.79
SH3D19-202ENST00000409252 ERVV-1B6SEH8 477 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 ROBO1Q9Y6N7 1651 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 MARCH6O60337 910 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 TSHZ3Q63HK5 1081 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 LARGE2Q8N3Y3 721 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 KLHDC4Q8TBB5 520 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 SLKQ9H2G2 1235 aaPredicted RBP10.1□□□□□ -0.79
SH3D19-202ENST00000409252 CTNNA3Q9UI47 895 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 H3BQV1 296 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 GSTO1P78417 241 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 HDAC1Q13547 482 aaPredicted RBP10.1□□□□□ -0.79
SH3D19-202ENST00000409252 IFFO2Q5TF58 517 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 SUPT20HQ8NEM7 779 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 PCDHB15Q9Y5E8 787 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 CNKSR1Q969H4 720 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 ZBTB40Q9NUA8 1239 aa10.1□□□□□ -0.79
SH3D19-202ENST00000409252 BAG3O95817 575 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 C22orf23Q9BZE7 217 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 NARFQ9UHQ1 456 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 GJA3Q9Y6H8 435 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 TRIM29Q14134 588 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 BEND3Q5T5X7 828 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 MED1Q15648 1581 aaPredicted RBP10.09□□□□□ -0.79
SH3D19-202ENST00000409252 ZBTB7BO15156 539 aaPredicted RBP10.09□□□□□ -0.79
SH3D19-202ENST00000409252 SSFA2P28290 1259 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 LMOD1P29536 600 aaPredicted RBP10.09□□□□□ -0.79
SH3D19-202ENST00000409252 RPS8P62241 208 aaKnown RBP10.09□□□□□ -0.79
SH3D19-202ENST00000409252 MPNDQ8N594 471 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 JAG2Q9Y219 1238 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 TNS2Q63HR2 1409 aa10.09□□□□□ -0.79
SH3D19-202ENST00000409252 MINDY4BA8MYZ0 360 aa10.08□□□□□ -0.8
SH3D19-202ENST00000409252 R3HDM1Q15032 1099 aaKnown RBP10.08□□□□□ -0.8
SH3D19-202ENST00000409252 PUM3Q15397 648 aaKnown RBP10.08□□□□□ -0.8
SH3D19-202ENST00000409252 ERFEQ4G0M1 354 aa10.08□□□□□ -0.8
SH3D19-202ENST00000409252 PAXIP1Q6ZW49 1069 aaPredicted RBP10.08□□□□□ -0.8
SH3D19-202ENST00000409252 ARHGEF1Q92888 912 aaKnown RBP10.08□□□□□ -0.8
SH3D19-202ENST00000409252 EVI5LQ96CN4 794 aa10.08□□□□□ -0.8
SH3D19-202ENST00000409252 NAPBQ9H115 298 aa10.08□□□□□ -0.8
SH3D19-202ENST00000409252 MPHOSPH10O00566 681 aaKnown RBP10.08□□□□□ -0.8
SH3D19-202ENST00000409252 EZH2Q15910 746 aaKnown RBP10.08□□□□□ -0.8
SH3D19-202ENST00000409252 DEFB132Q7Z7B7 95 aa10.08□□□□□ -0.8
SH3D19-202ENST00000409252 TAF5LO75529 589 aa10.08□□□□□ -0.8
SH3D19-202ENST00000409252 CCAR1Q8IX12 1150 aaKnown RBP10.08□□□□□ -0.8
SH3D19-202ENST00000409252 ZNF521Q96K83 1311 aa10.08□□□□□ -0.8
SH3D19-202ENST00000409252 IGHDP01880 384 aa10.08□□□□□ -0.8
SH3D19-202ENST00000409252 ABCC4O15439 1325 aa10.08□□□□□ -0.8
SH3D19-202ENST00000409252 IMMTQ16891 758 aaKnown RBP10.07□□□□□ -0.8
SH3D19-202ENST00000409252 RBM26Q5T8P6 1007 aaKnown RBP10.07□□□□□ -0.8
SH3D19-202ENST00000409252 NLRP10Q86W26 655 aa10.07□□□□□ -0.8
SH3D19-202ENST00000409252 C16orf71Q8IYS4 520 aaPredicted RBP10.07□□□□□ -0.8
SH3D19-202ENST00000409252 EIF6P56537 245 aaKnown RBP10.07□□□□□ -0.8
SH3D19-202ENST00000409252 NKX1-1Q15270 411 aaPredicted RBP10.07□□□□□ -0.8
SH3D19-202ENST00000409252 CLEC4GQ6UXB4 293 aa10.07□□□□□ -0.8
SH3D19-202ENST00000409252 ZNF287Q9HBT7 754 aa10.07□□□□□ -0.8
SH3D19-202ENST00000409252 PPIP5K2O43314 1243 aa10.07□□□□□ -0.8
SH3D19-202ENST00000409252 HIBADHP31937 336 aaKnown RBP10.07□□□□□ -0.8
SH3D19-202ENST00000409252 SLC4A3P48751 1232 aa10.07□□□□□ -0.8
SH3D19-202ENST00000409252 ARHGAP27Q6ZUM4 889 aa10.07□□□□□ -0.8
SH3D19-202ENST00000409252 NIM1KQ8IY84 436 aa10.07□□□□□ -0.8
SH3D19-202ENST00000409252 MAP2P11137 1827 aaKnown RBP10.07□□□□□ -0.8
SH3D19-202ENST00000409252 CYP7A1P22680 504 aa10.07□□□□□ -0.8
SH3D19-202ENST00000409252 RASSF8Q8NHQ8 419 aa10.07□□□□□ -0.8
SH3D19-202ENST00000409252 MROH5Q6ZUA9 1318 aa10.06□□□□□ -0.8
SH3D19-202ENST00000409252 NAA16Q6N069 864 aaPredicted RBP10.06□□□□□ -0.8
SH3D19-202ENST00000409252 LINC00116Q8NCU8 138 aa10.06□□□□□ -0.8
SH3D19-202ENST00000409252 A0A1B0GUL7 405 aa10.06□□□□□ -0.8
SH3D19-202ENST00000409252 HLFQ16534 295 aa10.06□□□□□ -0.8
SH3D19-202ENST00000409252 UBAC1Q9BSL1 405 aa10.06□□□□□ -0.8
SH3D19-202ENST00000409252 MKNK2Q9HBH9 465 aa10.06□□□□□ -0.8
SH3D19-202ENST00000409252 RBM19Q9Y4C8 960 aaKnown RBP10.06□□□□□ -0.8
SH3D19-202ENST00000409252 PPEF1O14829 653 aaPredicted RBP10.06□□□□□ -0.8
SH3D19-202ENST00000409252 MCTP1Q6DN14 999 aa10.06□□□□□ -0.8
SH3D19-202ENST00000409252 NOP58Q9Y2X3 529 aaKnown RBP10.06□□□□□ -0.8
SH3D19-202ENST00000409252 FOXD4L5Q5VV16 416 aaPredicted RBP10.06□□□□□ -0.8
SH3D19-202ENST00000409252 FOXD4L4Q8WXT5 416 aaPredicted RBP10.06□□□□□ -0.8
SH3D19-202ENST00000409252 USP44Q9H0E7 712 aa10.06□□□□□ -0.8
SH3D19-202ENST00000409252 NUCB1Q02818 461 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 CRNKL1Q9BZJ0 848 aaKnown RBP10.05□□□□□ -0.8
SH3D19-202ENST00000409252 VEZTQ9HBM0 779 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 DENND2AQ9ULE3 1009 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 LDHBP07195 334 aaKnown RBP10.05□□□□□ -0.8
SH3D19-202ENST00000409252 SUSD4Q5VX71 490 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 SMIM5Q71RC9 77 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 ILDR1Q86SU0 546 aaPredicted RBP10.05□□□□□ -0.8
SH3D19-202ENST00000409252 CCDC125Q86Z20 511 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 TRMT2AQ8IZ69 625 aaKnown RBP10.05□□□□□ -0.8
SH3D19-202ENST00000409252 GREM2Q9H772 168 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 DCTPP1Q9H773 170 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 TCEAL9Q9UHQ7 104 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 CARMIL3Q8ND23 1372 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 MYOM1P52179 1685 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 HLA-DOAP06340 250 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 PNMA6EA0A0J9YXQ4 647 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 TIMM10P62072 90 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 ITPK1Q13572 414 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 SLC4A8Q2Y0W8 1093 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 TNNI3KQ59H18 835 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms