RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
TUBA3D-202ENST00000409047 TRPM4Q8TD43 1214 aa17.3■□□□□ 0.36
TUBA3D-202ENST00000409047 DDX60Q8IY21 1712 aaKnown RBP17.3■□□□□ 0.36
TUBA3D-202ENST00000409047 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
TUBA3D-202ENST00000409047 NLRP10Q86W26 655 aa17.29■□□□□ 0.36
TUBA3D-202ENST00000409047 HHIPL1Q96JK4 782 aa17.29■□□□□ 0.36
TUBA3D-202ENST00000409047 CDHR2Q9BYE9 1310 aa17.28■□□□□ 0.36
TUBA3D-202ENST00000409047 BBOX1O75936 387 aa17.28■□□□□ 0.36
TUBA3D-202ENST00000409047 RAD17O75943 681 aa17.28■□□□□ 0.36
TUBA3D-202ENST00000409047 HCLS1P14317 486 aaPredicted RBP17.28■□□□□ 0.36
TUBA3D-202ENST00000409047 EIF2S2P20042 333 aaKnown RBP17.28■□□□□ 0.36
TUBA3D-202ENST00000409047 CIAPIN1Q6FI81 312 aa17.28■□□□□ 0.36
TUBA3D-202ENST00000409047 ZIC5Q96T25 663 aa17.28■□□□□ 0.36
TUBA3D-202ENST00000409047 TSPYL4Q9UJ04 414 aa17.28■□□□□ 0.36
TUBA3D-202ENST00000409047 DLK2Q6UY11 383 aa17.27■□□□□ 0.36
TUBA3D-202ENST00000409047 DPP8Q6V1X1 898 aaPredicted RBP17.27■□□□□ 0.36
TUBA3D-202ENST00000409047 MPNDQ8N594 471 aa17.27■□□□□ 0.36
TUBA3D-202ENST00000409047 SUPT20HQ8NEM7 779 aa17.27■□□□□ 0.36
TUBA3D-202ENST00000409047 ZC3H15Q8WU90 426 aaKnown RBP17.27■□□□□ 0.36
TUBA3D-202ENST00000409047 BEGAINQ9BUH8 593 aa17.27■□□□□ 0.36
TUBA3D-202ENST00000409047 CCDC85CA6NKD9 419 aa17.26■□□□□ 0.35
TUBA3D-202ENST00000409047 NEFMP07197 916 aa17.26■□□□□ 0.35
TUBA3D-202ENST00000409047 COPS6Q7L5N1 327 aa17.26■□□□□ 0.35
TUBA3D-202ENST00000409047 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
TUBA3D-202ENST00000409047 TCIRG1Q13488 830 aa17.25■□□□□ 0.35
TUBA3D-202ENST00000409047 GRAPQ13588 217 aa17.25■□□□□ 0.35
TUBA3D-202ENST00000409047 GRAPLQ8TC17 118 aaPredicted RBP17.25■□□□□ 0.35
TUBA3D-202ENST00000409047 XAGE3Q8WTP9 111 aa17.25■□□□□ 0.35
TUBA3D-202ENST00000409047 MCOLN1Q9GZU1 580 aa17.25■□□□□ 0.35
TUBA3D-202ENST00000409047 EGFRP00533 1210 aa17.24■□□□□ 0.35
TUBA3D-202ENST00000409047 KRT24Q2M2I5 525 aa17.24■□□□□ 0.35
TUBA3D-202ENST00000409047 BABAM1Q9NWV8 329 aa17.24■□□□□ 0.35
TUBA3D-202ENST00000409047 CNOT7Q9UIV1 285 aaKnown RBP17.24■□□□□ 0.35
TUBA3D-202ENST00000409047 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
TUBA3D-202ENST00000409047 CA12O43570 354 aa17.23■□□□□ 0.35
TUBA3D-202ENST00000409047 MLLT1Q03111 559 aaPredicted RBP17.23■□□□□ 0.35
TUBA3D-202ENST00000409047 TNIP1Q15025 636 aa17.23■□□□□ 0.35
TUBA3D-202ENST00000409047 CDC37L1Q7L3B6 337 aa17.23■□□□□ 0.35
TUBA3D-202ENST00000409047 NECTIN2Q92692 538 aa17.23■□□□□ 0.35
TUBA3D-202ENST00000409047 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
TUBA3D-202ENST00000409047 SH3TC1Q8TE82 1336 aa17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 MAPK8IP3Q9UPT6 1336 aa17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 RIPK4P57078 832 aa17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 AIMP1Q12904 312 aaKnown RBP17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 HSP90AB3PQ58FF7 597 aa17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 DDX46Q7L014 1031 aaKnown RBP17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 MICALL2Q8IY33 904 aa17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 ZNF428Q96B54 188 aa17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 BCL2L13Q9BXK5 485 aa17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 ZNF408Q9H9D4 720 aa17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 TRMT112Q9UI30 125 aaKnown RBP17.22■□□□□ 0.35
TUBA3D-202ENST00000409047 FAM155AB1AL88 458 aaPredicted RBP17.21■□□□□ 0.35
TUBA3D-202ENST00000409047 PSMD14O00487 310 aa17.21■□□□□ 0.35
TUBA3D-202ENST00000409047 TMPOP42166 694 aaKnown RBP17.21■□□□□ 0.35
TUBA3D-202ENST00000409047 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
TUBA3D-202ENST00000409047 USP48Q86UV5 1035 aa17.21■□□□□ 0.35
TUBA3D-202ENST00000409047 CELF1Q92879 486 aaKnown RBP17.21■□□□□ 0.35
TUBA3D-202ENST00000409047 RTL9Q8NET4 1388 aa17.2■□□□□ 0.34
TUBA3D-202ENST00000409047 DPF2Q92785 391 aa17.2■□□□□ 0.34
TUBA3D-202ENST00000409047 KCNQ5Q9NR82 932 aa17.2■□□□□ 0.34
TUBA3D-202ENST00000409047 POLLQ9UGP5 575 aa17.2■□□□□ 0.34
TUBA3D-202ENST00000409047 CHL1O00533 1208 aa17.19■□□□□ 0.34
TUBA3D-202ENST00000409047 SF3B3Q15393 1217 aaKnown RBP17.19■□□□□ 0.34
TUBA3D-202ENST00000409047 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
TUBA3D-202ENST00000409047 PNNQ9H307 717 aaKnown RBP17.19■□□□□ 0.34
TUBA3D-202ENST00000409047 DBNDD1Q9H9R9 158 aa17.19■□□□□ 0.34
TUBA3D-202ENST00000409047 HUNKP57058 714 aa17.18■□□□□ 0.34
TUBA3D-202ENST00000409047 NOGQ13253 232 aa17.18■□□□□ 0.34
TUBA3D-202ENST00000409047 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
TUBA3D-202ENST00000409047 CHPF2Q9P2E5 772 aa17.18■□□□□ 0.34
TUBA3D-202ENST00000409047 H7C1D1 291 aa17.17■□□□□ 0.34
TUBA3D-202ENST00000409047 GPSM2P81274 684 aa17.17■□□□□ 0.34
TUBA3D-202ENST00000409047 WASHC4Q2M389 1173 aa17.17■□□□□ 0.34
TUBA3D-202ENST00000409047 TBC1D10BQ4KMP7 808 aaPredicted RBP17.17■□□□□ 0.34
TUBA3D-202ENST00000409047 PDE4DIPQ5VU43 2346 aa17.16■□□□□ 0.34
TUBA3D-202ENST00000409047 ADM5C9JUS6 153 aa17.16■□□□□ 0.34
TUBA3D-202ENST00000409047 DGKZQ13574 1117 aa17.16■□□□□ 0.34
TUBA3D-202ENST00000409047 PLBD2Q8NHP8 589 aa17.16■□□□□ 0.34
TUBA3D-202ENST00000409047 FAM89AQ96GI7 184 aa17.16■□□□□ 0.34
TUBA3D-202ENST00000409047 NSFL1CQ9UNZ2 370 aaKnown RBP17.16■□□□□ 0.34
TUBA3D-202ENST00000409047 TRIM35Q9UPQ4 493 aa17.16■□□□□ 0.34
TUBA3D-202ENST00000409047 PSME4Q14997 1843 aa17.16■□□□□ 0.34
TUBA3D-202ENST00000409047 RIMBP2O15034 1052 aa17.15■□□□□ 0.34
TUBA3D-202ENST00000409047 RGMBQ6NW40 437 aa17.15■□□□□ 0.34
TUBA3D-202ENST00000409047 KRT26Q7Z3Y9 468 aa17.15■□□□□ 0.34
TUBA3D-202ENST00000409047 GBA2Q9HCG7 927 aaPredicted RBP17.15■□□□□ 0.34
TUBA3D-202ENST00000409047 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
TUBA3D-202ENST00000409047 ASTN2O75129 1339 aaPredicted RBP17.15■□□□□ 0.34
TUBA3D-202ENST00000409047 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
TUBA3D-202ENST00000409047 ECE2O60344 883 aa17.14■□□□□ 0.33
TUBA3D-202ENST00000409047 TBC1D16Q8TBP0 767 aa17.14■□□□□ 0.33
TUBA3D-202ENST00000409047 RPS12P25398 132 aaKnown RBP17.13■□□□□ 0.33
TUBA3D-202ENST00000409047 LMOD3Q0VAK6 560 aa17.13■□□□□ 0.33
TUBA3D-202ENST00000409047 DOK7Q18PE1 504 aa17.13■□□□□ 0.33
TUBA3D-202ENST00000409047 ANKRD13DQ6ZTN6 518 aa17.13■□□□□ 0.33
TUBA3D-202ENST00000409047 C6orf229H3BNL8 230 aa17.12■□□□□ 0.33
TUBA3D-202ENST00000409047 VIL1P09327 827 aaKnown RBP17.12■□□□□ 0.33
TUBA3D-202ENST00000409047 KIF23Q02241 960 aaPredicted RBP17.12■□□□□ 0.33
TUBA3D-202ENST00000409047 TRIM28Q13263 835 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms