RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 CCDC93Q567U6 631 aa13.04□□□□□ -0.32
TSPAN9-202ENST00000407263 DDX46Q7L014 1031 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-202ENST00000407263 SRCIN1Q9C0H9 1055 aa13.04□□□□□ -0.32
TSPAN9-202ENST00000407263 NOB1Q9ULX3 412 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-202ENST00000407263 COL4A5P29400 1685 aa13.03□□□□□ -0.32
TSPAN9-202ENST00000407263 PDE8AO60658 829 aa13.03□□□□□ -0.32
TSPAN9-202ENST00000407263 ALDH1B1P30837 517 aa13.03□□□□□ -0.32
TSPAN9-202ENST00000407263 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
TSPAN9-202ENST00000407263 CTSWP56202 376 aa13.03□□□□□ -0.32
TSPAN9-202ENST00000407263 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
TSPAN9-202ENST00000407263 RNF181Q9P0P0 153 aa13.03□□□□□ -0.32
TSPAN9-202ENST00000407263 TNNQ9UQP3 1299 aa13.03□□□□□ -0.32
TSPAN9-202ENST00000407263 PRELPP51888 382 aa13.02□□□□□ -0.33
TSPAN9-202ENST00000407263 CASP7P55210 303 aa13.02□□□□□ -0.33
TSPAN9-202ENST00000407263 GRAPQ13588 217 aa13.02□□□□□ -0.33
TSPAN9-202ENST00000407263 SF3B3Q15393 1217 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-202ENST00000407263 C9orf131Q5VYM1 1079 aa13.02□□□□□ -0.33
TSPAN9-202ENST00000407263 GRAPLQ8TC17 118 aaPredicted RBP13.02□□□□□ -0.33
TSPAN9-202ENST00000407263 FRAT1Q92837 279 aaPredicted RBP13.02□□□□□ -0.33
TSPAN9-202ENST00000407263 CELF1Q92879 486 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-202ENST00000407263 TAOK3Q9H2K8 898 aa13.02□□□□□ -0.33
TSPAN9-202ENST00000407263 SEC31BQ9NQW1 1179 aa13.02□□□□□ -0.33
TSPAN9-202ENST00000407263 H7C1W4 665 aa13.01□□□□□ -0.33
TSPAN9-202ENST00000407263 GRM8O00222 908 aa13.01□□□□□ -0.33
TSPAN9-202ENST00000407263 ALDH1L1O75891 902 aa13.01□□□□□ -0.33
TSPAN9-202ENST00000407263 FAM161AQ3B820 660 aa13.01□□□□□ -0.33
TSPAN9-202ENST00000407263 CCDC152Q4G0S7 254 aa13.01□□□□□ -0.33
TSPAN9-202ENST00000407263 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
TSPAN9-202ENST00000407263 ZNF526Q8TF50 670 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-202ENST00000407263 C7orf43Q8WVR3 580 aa13.01□□□□□ -0.33
TSPAN9-202ENST00000407263 C9orf78Q9NZ63 289 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-202ENST00000407263 PSME4Q14997 1843 aa13.01□□□□□ -0.33
TSPAN9-202ENST00000407263 HSP90B1P14625 803 aaKnown RBP13□□□□□ -0.33
TSPAN9-202ENST00000407263 API5Q9BZZ5 524 aaKnown RBP13□□□□□ -0.33
TSPAN9-202ENST00000407263 GREM2Q9H772 168 aa13□□□□□ -0.33
TSPAN9-202ENST00000407263 CHMP3Q9Y3E7 222 aa13□□□□□ -0.33
TSPAN9-202ENST00000407263 LTBP3Q9NS15 1303 aa12.99□□□□□ -0.33
TSPAN9-202ENST00000407263 BRPF1P55201 1214 aaPredicted RBP12.99□□□□□ -0.33
TSPAN9-202ENST00000407263 FKBP4Q02790 459 aaKnown RBP eCLIP12.99□□□□□ -0.33
TSPAN9-202ENST00000407263 CLUAP1Q96AJ1 413 aa12.99□□□□□ -0.33
TSPAN9-202ENST00000407263 ZNF277Q9NRM2 450 aaPredicted RBP12.99□□□□□ -0.33
TSPAN9-202ENST00000407263 MYH13Q9UKX3 1938 aa12.99□□□□□ -0.33
TSPAN9-202ENST00000407263 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 ZNF646O15015 1829 aaPredicted RBP12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 NBPF7P0C2Y1 421 aaPredicted RBP12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 TRIM27P14373 513 aa12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 LMNB1P20700 586 aa12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 TTLL11Q8NHH1 800 aa12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 SUCLG2Q96I99 432 aa12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 PLA2G12BQ9BX93 195 aa12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 ATP6V0A2Q9Y487 856 aa12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 SCN9AQ15858 1988 aa12.98□□□□□ -0.33
TSPAN9-202ENST00000407263 CCT4P50991 539 aaKnown RBP12.97□□□□□ -0.33
TSPAN9-202ENST00000407263 ATF7IPQ6VMQ6 1270 aa12.97□□□□□ -0.33
TSPAN9-202ENST00000407263 RTKN2Q8IZC4 609 aa12.97□□□□□ -0.33
TSPAN9-202ENST00000407263 TMX4Q9H1E5 349 aaPredicted RBP12.97□□□□□ -0.33
TSPAN9-202ENST00000407263 WDR90Q96KV7 1748 aa12.96□□□□□ -0.33
TSPAN9-202ENST00000407263 ITGA6P23229 1130 aa12.96□□□□□ -0.33
TSPAN9-202ENST00000407263 FOXO4P98177 505 aa12.96□□□□□ -0.33
TSPAN9-202ENST00000407263 ZKSCAN2Q63HK3 967 aa12.96□□□□□ -0.33
TSPAN9-202ENST00000407263 DPP8Q6V1X1 898 aaPredicted RBP12.96□□□□□ -0.33
TSPAN9-202ENST00000407263 ANKRD18AQ8IVF6 992 aa12.96□□□□□ -0.33
TSPAN9-202ENST00000407263 ZNF784Q8NCA9 323 aaPredicted RBP12.96□□□□□ -0.33
TSPAN9-202ENST00000407263 CDC5LQ99459 802 aaKnown RBP12.96□□□□□ -0.33
TSPAN9-202ENST00000407263 UTYO14607 1347 aa12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 IPO8O15397 1037 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 BBOX1O75936 387 aa12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 IARSP41252 1262 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 RPS8P62241 208 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 LMBR1LQ6UX01 489 aa12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 TMC4Q7Z404 712 aa12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 SP8Q8IXZ3 490 aa12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 FTSJ3Q8IY81 847 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 MPNDQ8N594 471 aa12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 ARHGAP45Q92619 1136 aa12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 GPR101Q96P66 508 aaPredicted RBP12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 BICC1Q9H694 974 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 SCN4AP35499 1836 aa12.95□□□□□ -0.34
TSPAN9-202ENST00000407263 ARAP2Q8WZ64 1704 aa12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 GPSM2P81274 684 aa12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 AOC3Q16853 763 aa12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 KAZALD1Q96I82 304 aa12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 PSMD1Q99460 953 aa12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 MEIS3Q99687 375 aa12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 USP44Q9H0E7 712 aa12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 RCAN3Q9UKA8 241 aa12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 NSFL1CQ9UNZ2 370 aaKnown RBP12.94□□□□□ -0.34
TSPAN9-202ENST00000407263 ZNF541Q9H0D2 1346 aa12.93□□□□□ -0.34
TSPAN9-202ENST00000407263 CSF1RP07333 972 aa12.93□□□□□ -0.34
TSPAN9-202ENST00000407263 UBTFL1P0CB47 393 aaPredicted RBP12.93□□□□□ -0.34
TSPAN9-202ENST00000407263 IGHMBP2P38935 993 aaKnown RBP12.93□□□□□ -0.34
TSPAN9-202ENST00000407263 TAF7LQ5H9L4 462 aa12.93□□□□□ -0.34
TSPAN9-202ENST00000407263 TMEM57Q8N5G2 664 aa12.93□□□□□ -0.34
TSPAN9-202ENST00000407263 ANKRD44Q8N8A2 993 aa12.93□□□□□ -0.34
TSPAN9-202ENST00000407263 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
TSPAN9-202ENST00000407263 ZC3H4Q9UPT8 1303 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms