RNA–Protein interactions for RNA: ENST00000406848.1

GAPDHP42-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 42, humanhuman

BASIC

Gene GAPDHP42, Length 981 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP42-201ENST00000406848 SLC19A1P41440 591 aa7.53□□□□□ -1.2
GAPDHP42-201ENST00000406848 DDX10Q13206 875 aaKnown RBP7.53□□□□□ -1.2
GAPDHP42-201ENST00000406848 MTMR2Q13614 643 aa7.53□□□□□ -1.2
GAPDHP42-201ENST00000406848 NBPF14Q5TI25 921 aa7.53□□□□□ -1.2
GAPDHP42-201ENST00000406848 DDX54Q8TDD1 881 aaKnown RBP7.53□□□□□ -1.2
GAPDHP42-201ENST00000406848 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.53□□□□□ -1.2
GAPDHP42-201ENST00000406848 COG6Q9Y2V7 657 aa7.53□□□□□ -1.2
GAPDHP42-201ENST00000406848 V9GY48 417 aaPredicted RBP7.53□□□□□ -1.2
GAPDHP42-201ENST00000406848 ERVV-2B6SEH9 535 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 NEFMP07197 916 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 JUNDP17535 347 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 CLK2P49760 499 aaKnown RBP7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 QPCTQ16769 361 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 C1orf141Q5JVX7 400 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 SLC27A3Q5K4L6 730 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 SULT6B1Q6IMI4 303 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 AEBP1Q8IUX7 1158 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 PRR7Q8TB68 274 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 SMARCC1Q92922 1105 aaPredicted RBP7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 DCAF5Q96JK2 942 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 CAMKK2Q96RR4 588 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 MEGF6O75095 1541 aa7.52□□□□□ -1.21
GAPDHP42-201ENST00000406848 RGPD3A6NKT7 1758 aaPredicted RBP7.51□□□□□ -1.21
GAPDHP42-201ENST00000406848 RGPD4Q7Z3J3 1758 aa7.51□□□□□ -1.21
GAPDHP42-201ENST00000406848 USHBP1Q8N6Y0 703 aa7.51□□□□□ -1.21
GAPDHP42-201ENST00000406848 GAS2L2Q8NHY3 880 aa7.51□□□□□ -1.21
GAPDHP42-201ENST00000406848 MYBBP1AQ9BQG0 1328 aaKnown RBP7.51□□□□□ -1.21
GAPDHP42-201ENST00000406848 PKD1L3Q7Z443 1732 aa7.5□□□□□ -1.21
GAPDHP42-201ENST00000406848 CFAP99D6REC4 459 aa7.5□□□□□ -1.21
GAPDHP42-201ENST00000406848 PHKG2P15735 406 aa7.5□□□□□ -1.21
GAPDHP42-201ENST00000406848 AKAP4Q5JQC9 854 aa7.5□□□□□ -1.21
GAPDHP42-201ENST00000406848 FAM182BQ5T319 152 aa7.5□□□□□ -1.21
GAPDHP42-201ENST00000406848 CCDC24Q8N4L8 307 aa7.5□□□□□ -1.21
GAPDHP42-201ENST00000406848 RETREG2Q8NC44 543 aa7.5□□□□□ -1.21
GAPDHP42-201ENST00000406848 ZBTB3Q9H5J0 574 aa7.5□□□□□ -1.21
GAPDHP42-201ENST00000406848 SBF2Q86WG5 1849 aa7.5□□□□□ -1.21
GAPDHP42-201ENST00000406848 RGPD2P0DJD1 1756 aa7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 NHSQ6T4R5 1651 aa7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 CYP27B1O15528 508 aa7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 HTATSF1O43719 755 aaKnown RBP7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 LILRB3O75022 631 aa7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 RTL5Q5HYW3 569 aaPredicted RBP7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 SPRYD7Q5W111 196 aa7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 ZNF530Q6P9A1 599 aaPredicted RBP7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 DEFB132Q7Z7B7 95 aa7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 BANK1Q8NDB2 785 aa7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 TNS1Q9HBL0 1735 aaKnown RBP7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 COL3A1P02461 1466 aaPredicted RBP7.49□□□□□ -1.21
GAPDHP42-201ENST00000406848 U2SURPO15042 1029 aaKnown RBP7.48□□□□□ -1.21
GAPDHP42-201ENST00000406848 U2AF1L5P0DN76 240 aaPredicted RBP7.48□□□□□ -1.21
GAPDHP42-201ENST00000406848 U2AF1Q01081 240 aaKnown RBP eCLIP7.48□□□□□ -1.21
GAPDHP42-201ENST00000406848 TXNRD1Q16881 649 aa7.48□□□□□ -1.21
GAPDHP42-201ENST00000406848 PRPF38BQ5VTL8 546 aaKnown RBP7.48□□□□□ -1.21
GAPDHP42-201ENST00000406848 PRKRIP1Q9H875 184 aaPredicted RBP7.48□□□□□ -1.21
GAPDHP42-201ENST00000406848 TMOD3Q9NYL9 352 aa7.48□□□□□ -1.21
GAPDHP42-201ENST00000406848 ZNF330Q9Y3S2 320 aaPredicted RBP7.48□□□□□ -1.21
GAPDHP42-201ENST00000406848 KCNQ2O43526 872 aa7.47□□□□□ -1.21
GAPDHP42-201ENST00000406848 EZH2Q15910 746 aaKnown RBP7.47□□□□□ -1.21
GAPDHP42-201ENST00000406848 TUSC1Q2TAM9 212 aa7.47□□□□□ -1.21
GAPDHP42-201ENST00000406848 RGS22Q8NE09 1264 aa7.47□□□□□ -1.21
GAPDHP42-201ENST00000406848 ACSBG1Q96GR2 724 aa7.47□□□□□ -1.21
GAPDHP42-201ENST00000406848 NUDT12Q9BQG2 462 aa7.47□□□□□ -1.21
GAPDHP42-201ENST00000406848 IRX2Q9BZI1 471 aaPredicted RBP7.47□□□□□ -1.21
GAPDHP42-201ENST00000406848 SNRKQ9NRH2 765 aa7.47□□□□□ -1.21
GAPDHP42-201ENST00000406848 GNAT3A8MTJ3 354 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 ANP32CO43423 234 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 HMOX1P09601 288 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 RFC5P40937 340 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 CABP4P57796 275 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 IRF5Q13568 498 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 ZNF697Q5TEC3 545 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 PTCRAQ6ISU1 281 aaPredicted RBP7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 TRIM67Q6ZTA4 783 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 ZNF598Q86UK7 904 aaKnown RBP7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 FLAD1Q8NFF5 587 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 TSC1Q92574 1164 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 SYTL4Q96C24 671 aaPredicted RBP7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 STK32BQ9NY57 414 aa7.46□□□□□ -1.22
GAPDHP42-201ENST00000406848 SHANK3Q9BYB0 1731 aa7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 ZBTB24O43167 697 aaPredicted RBP7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 PRKAR2BP31323 418 aa7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 RPIAP49247 311 aa7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 LMOD3Q0VAK6 560 aa7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 WDR43Q15061 677 aaKnown RBP eCLIP7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 MTHFSDQ2M296 383 aaKnown RBP7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 TMCO4Q5TGY1 634 aa7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 MPRIPQ6WCQ1 1025 aa7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 SLC16A10Q8TF71 515 aa7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 PIGBQ92521 554 aa7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 RTF1Q92541 710 aaKnown RBP7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 EP400Q96L91 3159 aa7.45□□□□□ -1.22
GAPDHP42-201ENST00000406848 RREB1Q92766 1687 aa7.44□□□□□ -1.22
GAPDHP42-201ENST00000406848 RNMTO43148 476 aaKnown RBP7.44□□□□□ -1.22
GAPDHP42-201ENST00000406848 GFRA3O60609 400 aa7.44□□□□□ -1.22
GAPDHP42-201ENST00000406848 CCNYL3P0C7X3 344 aa7.44□□□□□ -1.22
GAPDHP42-201ENST00000406848 TRIM32Q13049 653 aa7.44□□□□□ -1.22
GAPDHP42-201ENST00000406848 CNGB1Q14028 1251 aaPredicted RBP7.44□□□□□ -1.22
GAPDHP42-201ENST00000406848 SLC15A2Q16348 729 aa7.44□□□□□ -1.22
GAPDHP42-201ENST00000406848 PTPRNQ16849 979 aa7.44□□□□□ -1.22
GAPDHP42-201ENST00000406848 DESI1Q6ICB0 168 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms