RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 COL9A3Q14050 684 aaPredicted RBP16.23■□□□□ 0.19
PMS2-204ENST00000406569 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
PMS2-204ENST00000406569 ZNF589Q86UQ0 364 aaPredicted RBP16.23■□□□□ 0.19
PMS2-204ENST00000406569 DYNC1I1O14576 645 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
PMS2-204ENST00000406569 SLC39A6Q13433 755 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 TNNI3KQ59H18 835 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 ANKRD13DQ6ZTN6 518 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 CDC37L1Q7L3B6 337 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 ZNF496Q96IT1 587 aaPredicted RBP16.22■□□□□ 0.19
PMS2-204ENST00000406569 MYD88Q99836 296 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 SIL1Q9H173 461 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 DBNLQ9UJU6 430 aaKnown RBP16.22■□□□□ 0.19
PMS2-204ENST00000406569 TAF6LQ9Y6J9 622 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 FPGT-TNNI3KV9GXZ4 949 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 SNRPA1P09661 255 aaKnown RBP16.22■□□□□ 0.19
PMS2-204ENST00000406569 CASP7P55210 303 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 GIMAP6Q6P9H5 292 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 SPTLC3Q9NUV7 552 aa16.22■□□□□ 0.19
PMS2-204ENST00000406569 NUP188Q5SRE5 1749 aa16.21■□□□□ 0.19
PMS2-204ENST00000406569 ZNF609O15014 1411 aa16.21■□□□□ 0.19
PMS2-204ENST00000406569 RBM43Q6ZSC3 357 aaKnown RBP16.21■□□□□ 0.19
PMS2-204ENST00000406569 IFNL2Q8IZJ0 200 aa16.21■□□□□ 0.19
PMS2-204ENST00000406569 KLHDC4Q8TBB5 520 aa16.21■□□□□ 0.19
PMS2-204ENST00000406569 DDX54Q8TDD1 881 aaKnown RBP16.21■□□□□ 0.19
PMS2-204ENST00000406569 MAP7D2Q96T17 732 aa16.21■□□□□ 0.19
PMS2-204ENST00000406569 SCAND2PQ9GZW5 306 aaPredicted RBP16.21■□□□□ 0.19
PMS2-204ENST00000406569 U3KPZ7 1027 aaPredicted RBP16.21■□□□□ 0.19
PMS2-204ENST00000406569 SPEF2Q9C093 1822 aa16.2■□□□□ 0.18
PMS2-204ENST00000406569 TJP1Q07157 1748 aa16.2■□□□□ 0.18
PMS2-204ENST00000406569 UQCRHLA0A096LP55 91 aa16.2■□□□□ 0.18
PMS2-204ENST00000406569 UQCRHP07919 91 aa16.2■□□□□ 0.18
PMS2-204ENST00000406569 CCDC192P0DO97 292 aa16.2■□□□□ 0.18
PMS2-204ENST00000406569 GLIPR1L2Q4G1C9 344 aa16.2■□□□□ 0.18
PMS2-204ENST00000406569 NFATC2IPQ8NCF5 419 aa16.2■□□□□ 0.18
PMS2-204ENST00000406569 DCAF5Q96JK2 942 aa16.2■□□□□ 0.18
PMS2-204ENST00000406569 HAUS7Q99871 368 aa16.2■□□□□ 0.18
PMS2-204ENST00000406569 UBR2Q8IWV8 1755 aa16.2■□□□□ 0.18
PMS2-204ENST00000406569 TPM3P06753 285 aa16.19■□□□□ 0.18
PMS2-204ENST00000406569 MYL6BP14649 208 aa16.19■□□□□ 0.18
PMS2-204ENST00000406569 LMOD2Q6P5Q4 547 aa16.19■□□□□ 0.18
PMS2-204ENST00000406569 DCCP43146 1447 aa16.19■□□□□ 0.18
PMS2-204ENST00000406569 PALLDQ8WX93 1383 aa16.19■□□□□ 0.18
PMS2-204ENST00000406569 AP5Z1O43299 807 aa16.19■□□□□ 0.18
PMS2-204ENST00000406569 TFCP2Q12800 502 aa16.19■□□□□ 0.18
PMS2-204ENST00000406569 GTF3C6Q969F1 213 aa16.19■□□□□ 0.18
PMS2-204ENST00000406569 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
PMS2-204ENST00000406569 C19orf44Q9H6X5 657 aa16.19■□□□□ 0.18
PMS2-204ENST00000406569 SH3TC1Q8TE82 1336 aa16.18■□□□□ 0.18
PMS2-204ENST00000406569 MAP3K11Q16584 847 aa16.18■□□□□ 0.18
PMS2-204ENST00000406569 FAM200AQ8TCP9 573 aa16.18■□□□□ 0.18
PMS2-204ENST00000406569 NUP62CLQ9H1M0 184 aa16.18■□□□□ 0.18
PMS2-204ENST00000406569 GPR108Q9NPR9 543 aa16.18■□□□□ 0.18
PMS2-204ENST00000406569 DDX19AQ9NUU7 478 aaKnown RBP16.18■□□□□ 0.18
PMS2-204ENST00000406569 USP16Q9Y5T5 823 aa16.18■□□□□ 0.18
PMS2-204ENST00000406569 LIG1P18858 919 aa16.17■□□□□ 0.18
PMS2-204ENST00000406569 ZC3H6P61129 1189 aaKnown RBP16.17■□□□□ 0.18
PMS2-204ENST00000406569 RESTQ13127 1097 aa16.17■□□□□ 0.18
PMS2-204ENST00000406569 NOLC1Q14978 699 aaKnown RBP eCLIP16.17■□□□□ 0.18
PMS2-204ENST00000406569 PROSER2Q86WR7 435 aaPredicted RBP16.17■□□□□ 0.18
PMS2-204ENST00000406569 PLBD2Q8NHP8 589 aa16.17■□□□□ 0.18
PMS2-204ENST00000406569 LEO1Q8WVC0 666 aaPredicted RBP16.17■□□□□ 0.18
PMS2-204ENST00000406569 EDC3Q96F86 508 aaKnown RBP16.17■□□□□ 0.18
PMS2-204ENST00000406569 PRIMPOLQ96LW4 560 aa16.17■□□□□ 0.18
PMS2-204ENST00000406569 NEK1Q96PY6 1258 aa16.17■□□□□ 0.18
PMS2-204ENST00000406569 NLRP2Q9NX02 1062 aa16.17■□□□□ 0.18
PMS2-204ENST00000406569 CYP27B1O15528 508 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 MCMDC2Q4G0Z9 681 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 TCEANC2Q96MN5 208 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 H7C1W4 665 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 DTNBO60941 627 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 MTERF4Q7Z6M4 381 aaKnown RBP16.16■□□□□ 0.18
PMS2-204ENST00000406569 FERMT3Q86UX7 667 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 TTC5Q8N0Z6 440 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 KBTBD3Q8NAB2 608 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 MYRIPQ8NFW9 859 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 DBNDD2Q9BQY9 259 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 LLPHQ9BRT6 129 aaKnown RBP16.16■□□□□ 0.18
PMS2-204ENST00000406569 CLSTN2Q9H4D0 955 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 MRVI1Q9Y6F6 885 aa16.16■□□□□ 0.18
PMS2-204ENST00000406569 GTF2F1P35269 517 aaKnown RBP eCLIP16.15■□□□□ 0.18
PMS2-204ENST00000406569 TYRO3Q06418 890 aa16.15■□□□□ 0.18
PMS2-204ENST00000406569 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
PMS2-204ENST00000406569 TTC12Q9H892 705 aaPredicted RBP16.15■□□□□ 0.18
PMS2-204ENST00000406569 CYP21A2P08686 494 aa16.14■□□□□ 0.17
PMS2-204ENST00000406569 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
PMS2-204ENST00000406569 AGXT2Q9BYV1 514 aa16.14■□□□□ 0.17
PMS2-204ENST00000406569 ZSCAN16Q9H4T2 348 aaPredicted RBP16.14■□□□□ 0.17
PMS2-204ENST00000406569 CPDO75976 1380 aa16.14■□□□□ 0.17
PMS2-204ENST00000406569 A0A087WZG4 1122 aa16.14■□□□□ 0.17
PMS2-204ENST00000406569 PFKFB2O60825 505 aa16.14■□□□□ 0.17
PMS2-204ENST00000406569 HMGB1P09429 215 aaKnown RBP16.14■□□□□ 0.17
PMS2-204ENST00000406569 FOXO4P98177 505 aa16.14■□□□□ 0.17
PMS2-204ENST00000406569 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
PMS2-204ENST00000406569 KIAA1524Q8TCG1 905 aa16.14■□□□□ 0.17
PMS2-204ENST00000406569 ZNF830Q96NB3 372 aaPredicted RBP16.14■□□□□ 0.17
PMS2-204ENST00000406569 DSCC1Q9BVC3 393 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms