RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 RIPK4P57078 832 aa27.59■■■□□ 2.01
RHBDD3-202ENST00000406335 FAM161AQ3B820 660 aa27.59■■■□□ 2.01
RHBDD3-202ENST00000406335 CFAP44Q96MT7 982 aa27.59■■■□□ 2.01
RHBDD3-202ENST00000406335 GLIS2Q9BZE0 524 aaPredicted RBP27.59■■■□□ 2.01
RHBDD3-202ENST00000406335 TRMT112Q9UI30 125 aaKnown RBP27.58■■■□□ 2.01
RHBDD3-202ENST00000406335 COPS6Q7L5N1 327 aa27.57■■■□□ 2
RHBDD3-202ENST00000406335 RTFDC1Q9BY42 306 aaPredicted RBP27.57■■■□□ 2
RHBDD3-202ENST00000406335 KDM3BQ7LBC6 1761 aa27.56■■■□□ 2
RHBDD3-202ENST00000406335 PDIA6Q15084 440 aa27.56■■■□□ 2
RHBDD3-202ENST00000406335 SAPCD2Q86UD0 394 aa27.56■■■□□ 2
RHBDD3-202ENST00000406335 LTBP1Q14766 1721 aa27.55■■■□□ 2
RHBDD3-202ENST00000406335 H7C1D1 291 aa27.55■■■□□ 2
RHBDD3-202ENST00000406335 PROSER3Q2NL68 480 aa27.55■■■□□ 2
RHBDD3-202ENST00000406335 PRKRIP1Q9H875 184 aaPredicted RBP27.55■■■□□ 2
RHBDD3-202ENST00000406335 NUP98P52948 1817 aa27.55■■■□□ 2
RHBDD3-202ENST00000406335 KIAA2012Q0VF49 1180 aa27.54■■■□□ 2
RHBDD3-202ENST00000406335 CDC37L1Q7L3B6 337 aa27.54■■■□□ 2
RHBDD3-202ENST00000406335 NLRP10Q86W26 655 aa27.54■■■□□ 2
RHBDD3-202ENST00000406335 XAGE3Q8WTP9 111 aa27.54■■■□□ 2
RHBDD3-202ENST00000406335 LMOD3Q0VAK6 560 aa27.53■■■□□ 2
RHBDD3-202ENST00000406335 GRAPQ13588 217 aa27.53■■■□□ 2
RHBDD3-202ENST00000406335 GRAPLQ8TC17 118 aaPredicted RBP27.53■■■□□ 2
RHBDD3-202ENST00000406335 ZC3H15Q8WU90 426 aaKnown RBP27.53■■■□□ 2
RHBDD3-202ENST00000406335 ZNF428Q96B54 188 aa27.53■■■□□ 2
RHBDD3-202ENST00000406335 CNOT7Q9UIV1 285 aaKnown RBP27.53■■■□□ 2
RHBDD3-202ENST00000406335 SH3TC1Q8TE82 1336 aa27.52■■■□□ 2
RHBDD3-202ENST00000406335 CA12O43570 354 aa27.52■■■□□ 2
RHBDD3-202ENST00000406335 TCIRG1Q13488 830 aa27.52■■■□□ 2
RHBDD3-202ENST00000406335 MLLT1Q03111 559 aaPredicted RBP27.51■■□□□ 1.99
RHBDD3-202ENST00000406335 LRP10Q7Z4F1 713 aa27.51■■□□□ 1.99
RHBDD3-202ENST00000406335 BABAM1Q9NWV8 329 aa27.51■■□□□ 1.99
RHBDD3-202ENST00000406335 LAS1LQ9Y4W2 734 aaKnown RBP27.51■■□□□ 1.99
RHBDD3-202ENST00000406335 CDHR2Q9BYE9 1310 aa27.5■■□□□ 1.99
RHBDD3-202ENST00000406335 HIRAP54198 1017 aaPredicted RBP27.49■■□□□ 1.99
RHBDD3-202ENST00000406335 NEUROD2Q15784 382 aa27.49■■□□□ 1.99
RHBDD3-202ENST00000406335 TMC4Q7Z404 712 aa27.49■■□□□ 1.99
RHBDD3-202ENST00000406335 USP48Q86UV5 1035 aa27.49■■□□□ 1.99
RHBDD3-202ENST00000406335 HHIPL1Q96JK4 782 aa27.49■■□□□ 1.99
RHBDD3-202ENST00000406335 PGAP2Q9UHJ9 254 aa27.49■■□□□ 1.99
RHBDD3-202ENST00000406335 WASHC4Q2M389 1173 aa27.48■■□□□ 1.99
RHBDD3-202ENST00000406335 MICALL2Q8IY33 904 aa27.48■■□□□ 1.99
RHBDD3-202ENST00000406335 TRPM4Q8TD43 1214 aa27.48■■□□□ 1.99
RHBDD3-202ENST00000406335 NSFL1CQ9UNZ2 370 aaKnown RBP27.48■■□□□ 1.99
RHBDD3-202ENST00000406335 RIMBP2O15034 1052 aa27.47■■□□□ 1.99
RHBDD3-202ENST00000406335 BRPF1P55201 1214 aaPredicted RBP27.47■■□□□ 1.99
RHBDD3-202ENST00000406335 ZBTB12Q9Y330 459 aaPredicted RBP27.47■■□□□ 1.99
RHBDD3-202ENST00000406335 C6orf229H3BNL8 230 aa27.46■■□□□ 1.99
RHBDD3-202ENST00000406335 CCDC146Q8IYE0 955 aa27.46■■□□□ 1.99
RHBDD3-202ENST00000406335 TMPOP42166 694 aaKnown RBP27.45■■□□□ 1.98
RHBDD3-202ENST00000406335 HUNKP57058 714 aa27.45■■□□□ 1.98
RHBDD3-202ENST00000406335 RBM26Q5T8P6 1007 aaKnown RBP27.45■■□□□ 1.98
RHBDD3-202ENST00000406335 SHTN1A0MZ66 631 aa27.44■■□□□ 1.98
RHBDD3-202ENST00000406335 YDJCA8MPS7 323 aa27.44■■□□□ 1.98
RHBDD3-202ENST00000406335 NOGQ13253 232 aa27.44■■□□□ 1.98
RHBDD3-202ENST00000406335 MCOLN1Q9GZU1 580 aa27.44■■□□□ 1.98
RHBDD3-202ENST00000406335 DBNDD1Q9H9R9 158 aa27.44■■□□□ 1.98
RHBDD3-202ENST00000406335 ZNF316A6NFI3 1004 aaPredicted RBP27.43■■□□□ 1.98
RHBDD3-202ENST00000406335 DGKZQ13574 1117 aa27.43■■□□□ 1.98
RHBDD3-202ENST00000406335 WDR43Q15061 677 aaKnown RBP eCLIP27.43■■□□□ 1.98
RHBDD3-202ENST00000406335 SAMD7Q7Z3H4 446 aa27.43■■□□□ 1.98
RHBDD3-202ENST00000406335 G3V3G9 751 aa27.42■■□□□ 1.98
RHBDD3-202ENST00000406335 PSMD14O00487 310 aa27.42■■□□□ 1.98
RHBDD3-202ENST00000406335 TBC1D10BQ4KMP7 808 aaPredicted RBP27.42■■□□□ 1.98
RHBDD3-202ENST00000406335 DCAF8Q5TAQ9 597 aa27.42■■□□□ 1.98
RHBDD3-202ENST00000406335 DPF2Q92785 391 aa27.42■■□□□ 1.98
RHBDD3-202ENST00000406335 DCPSQ96C86 337 aaKnown RBP27.42■■□□□ 1.98
RHBDD3-202ENST00000406335 FAM89AQ96GI7 184 aa27.42■■□□□ 1.98
RHBDD3-202ENST00000406335 RTL5Q5HYW3 569 aaPredicted RBP27.41■■□□□ 1.98
RHBDD3-202ENST00000406335 ANKRD13DQ6ZTN6 518 aa27.41■■□□□ 1.98
RHBDD3-202ENST00000406335 KRT26Q7Z3Y9 468 aa27.41■■□□□ 1.98
RHBDD3-202ENST00000406335 C2orf69Q8N8R5 385 aa27.41■■□□□ 1.98
RHBDD3-202ENST00000406335 EYA3Q99504 573 aa27.41■■□□□ 1.98
RHBDD3-202ENST00000406335 CHPF2Q9P2E5 772 aa27.41■■□□□ 1.98
RHBDD3-202ENST00000406335 ADAMTS8Q9UP79 889 aa27.41■■□□□ 1.98
RHBDD3-202ENST00000406335 ATP5J2-PTCD1G3V325 749 aa27.4■■□□□ 1.98
RHBDD3-202ENST00000406335 DOK7Q18PE1 504 aa27.4■■□□□ 1.98
RHBDD3-202ENST00000406335 KRT24Q2M2I5 525 aa27.4■■□□□ 1.98
RHBDD3-202ENST00000406335 HDGFL1Q5TGJ6 251 aa27.4■■□□□ 1.98
RHBDD3-202ENST00000406335 PLBD2Q8NHP8 589 aa27.4■■□□□ 1.98
RHBDD3-202ENST00000406335 DLK2Q6UY11 383 aa27.39■■□□□ 1.98
RHBDD3-202ENST00000406335 CELF1Q92879 486 aaKnown RBP27.39■■□□□ 1.98
RHBDD3-202ENST00000406335 TRPM7Q96QT4 1865 aa27.38■■□□□ 1.97
RHBDD3-202ENST00000406335 THSD7BQ9C0I4 1608 aa27.38■■□□□ 1.97
RHBDD3-202ENST00000406335 GPSM2P81274 684 aa27.37■■□□□ 1.97
RHBDD3-202ENST00000406335 RGMBQ6NW40 437 aa27.37■■□□□ 1.97
RHBDD3-202ENST00000406335 RUNDC1Q96C34 613 aa27.37■■□□□ 1.97
RHBDD3-202ENST00000406335 GBA2Q9HCG7 927 aaPredicted RBP27.37■■□□□ 1.97
RHBDD3-202ENST00000406335 CHL1O00533 1208 aa27.36■■□□□ 1.97
RHBDD3-202ENST00000406335 ECE2O60344 883 aa27.36■■□□□ 1.97
RHBDD3-202ENST00000406335 RPS12P25398 132 aaKnown RBP27.36■■□□□ 1.97
RHBDD3-202ENST00000406335 RGS19P49795 217 aa27.36■■□□□ 1.97
RHBDD3-202ENST00000406335 SF3B3Q15393 1217 aaKnown RBP27.36■■□□□ 1.97
RHBDD3-202ENST00000406335 ZIC5Q96T25 663 aa27.36■■□□□ 1.97
RHBDD3-202ENST00000406335 ZC3H12CQ9C0D7 883 aaKnown RBP27.36■■□□□ 1.97
RHBDD3-202ENST00000406335 DBF4Q9UBU7 674 aaPredicted RBP27.36■■□□□ 1.97
RHBDD3-202ENST00000406335 POLLQ9UGP5 575 aa27.36■■□□□ 1.97
RHBDD3-202ENST00000406335 ZNF157P51786 506 aaPredicted RBP27.35■■□□□ 1.97
RHBDD3-202ENST00000406335 CCDC102AQ96A19 550 aa27.35■■□□□ 1.97
RHBDD3-202ENST00000406335 IRS4O14654 1257 aaPredicted RBP27.34■■□□□ 1.97
RHBDD3-202ENST00000406335 ADM5C9JUS6 153 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms