RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 TRIM37O94972 964 aa35.18■■■■□ 3.22
CSNK1E-205ENST00000405675 CHMP5Q9NZZ3 219 aa35.18■■■■□ 3.22
CSNK1E-205ENST00000405675 NLRP10Q86W26 655 aa35.17■■■■□ 3.22
CSNK1E-205ENST00000405675 SYNE4Q8N205 404 aa35.17■■■■□ 3.22
CSNK1E-205ENST00000405675 ZBTB38Q8NAP3 1195 aaPredicted RBP35.17■■■■□ 3.22
CSNK1E-205ENST00000405675 LY75O60449 1722 aa35.16■■■■□ 3.22
CSNK1E-205ENST00000405675 CAMTA2O94983 1202 aa35.16■■■■□ 3.22
CSNK1E-205ENST00000405675 MCCP23508 829 aa35.16■■■■□ 3.22
CSNK1E-205ENST00000405675 DIAPH3Q9NSV4 1193 aa35.16■■■■□ 3.22
CSNK1E-205ENST00000405675 FOXD4L1Q9NU39 408 aa35.16■■■■□ 3.22
CSNK1E-205ENST00000405675 NUP98P52948 1817 aa35.16■■■■□ 3.22
CSNK1E-205ENST00000405675 SMIM5Q71RC9 77 aa35.15■■■■□ 3.22
CSNK1E-205ENST00000405675 LSG1Q9H089 658 aaKnown RBP35.15■■■■□ 3.22
CSNK1E-205ENST00000405675 LRRC24Q50LG9 513 aa35.15■■■■□ 3.22
CSNK1E-205ENST00000405675 DBNDD2Q9BQY9 259 aa35.15■■■■□ 3.22
CSNK1E-205ENST00000405675 RC3H1Q5TC82 1133 aaKnown RBP35.14■■■■□ 3.22
CSNK1E-205ENST00000405675 PLA2G12BQ9BX93 195 aa35.14■■■■□ 3.22
CSNK1E-205ENST00000405675 EPB41L2O43491 1005 aaKnown RBP35.13■■■■□ 3.21
CSNK1E-205ENST00000405675 ZNF34Q8IZ26 560 aa35.13■■■■□ 3.21
CSNK1E-205ENST00000405675 EYA2O00167 538 aa35.12■■■■□ 3.21
CSNK1E-205ENST00000405675 RAD50Q92878 1312 aa35.12■■■■□ 3.21
CSNK1E-205ENST00000405675 ANAPC15P60006 121 aa35.12■■■■□ 3.21
CSNK1E-205ENST00000405675 PUS3Q9BZE2 481 aaKnown RBP35.12■■■■□ 3.21
CSNK1E-205ENST00000405675 ANKRD36CQ5JPF3 1778 aa35.12■■■■□ 3.21
CSNK1E-205ENST00000405675 UBN2Q6ZU65 1347 aa35.11■■■■□ 3.21
CSNK1E-205ENST00000405675 ST18O60284 1047 aa35.11■■■■□ 3.21
CSNK1E-205ENST00000405675 ATP5JP18859 108 aa35.11■■■■□ 3.21
CSNK1E-205ENST00000405675 HSPA4P34932 840 aa35.11■■■■□ 3.21
CSNK1E-205ENST00000405675 IL15P40933 162 aaPredicted RBP35.11■■■■□ 3.21
CSNK1E-205ENST00000405675 IL17RAQ96F46 866 aa35.11■■■■□ 3.21
CSNK1E-205ENST00000405675 CCDC85AQ96PX6 553 aaPredicted RBP35.11■■■■□ 3.21
CSNK1E-205ENST00000405675 POTEAQ6S8J7 498 aa35.11■■■■□ 3.21
CSNK1E-205ENST00000405675 LRRC4BQ9NT99 713 aa35.11■■■■□ 3.21
CSNK1E-205ENST00000405675 HSP90AA1P07900 732 aaKnown RBP35.09■■■■□ 3.21
CSNK1E-205ENST00000405675 EDC3Q96F86 508 aaKnown RBP35.09■■■■□ 3.21
CSNK1E-205ENST00000405675 CDHR2Q9BYE9 1310 aa35.09■■■■□ 3.21
CSNK1E-205ENST00000405675 GNPATO15228 680 aa35.09■■■■□ 3.21
CSNK1E-205ENST00000405675 RPS6KA4O75676 772 aa35.09■■■■□ 3.21
CSNK1E-205ENST00000405675 CSF1RP07333 972 aa35.09■■■■□ 3.21
CSNK1E-205ENST00000405675 CIAO1O76071 339 aa35.08■■■■□ 3.21
CSNK1E-205ENST00000405675 RUFY2Q8WXA3 655 aa35.08■■■■□ 3.21
CSNK1E-205ENST00000405675 NEK4P51957 841 aa35.08■■■■□ 3.21
CSNK1E-205ENST00000405675 CCDC57Q2TAC2 916 aa35.08■■■■□ 3.21
CSNK1E-205ENST00000405675 FAM227BQ96M60 508 aa35.07■■■■□ 3.2
CSNK1E-205ENST00000405675 TRMT112Q9UI30 125 aaKnown RBP35.07■■■■□ 3.2
CSNK1E-205ENST00000405675 NMIQ13287 307 aaPredicted RBP35.06■■■■□ 3.2
CSNK1E-205ENST00000405675 FSD1Q9BTV5 496 aa35.06■■■■□ 3.2
CSNK1E-205ENST00000405675 GPR108Q9NPR9 543 aa35.06■■■■□ 3.2
CSNK1E-205ENST00000405675 NDUFB9Q9Y6M9 179 aa35.06■■■■□ 3.2
CSNK1E-205ENST00000405675 TAF1LQ8IZX4 1826 aa35.06■■■■□ 3.2
CSNK1E-205ENST00000405675 KIAA1211Q6ZU35 1233 aa35.06■■■■□ 3.2
CSNK1E-205ENST00000405675 AMIGO3Q86WK7 504 aa35.06■■■■□ 3.2
CSNK1E-205ENST00000405675 TIMM10P62072 90 aa35.05■■■■□ 3.2
CSNK1E-205ENST00000405675 PTH1RQ03431 593 aa35.05■■■■□ 3.2
CSNK1E-205ENST00000405675 NEUROD6Q96NK8 337 aa35.04■■■■□ 3.2
CSNK1E-205ENST00000405675 SUSD4Q5VX71 490 aa35.03■■■■□ 3.2
CSNK1E-205ENST00000405675 CIZ1Q9ULV3 898 aaPredicted RBP35.03■■■■□ 3.2
CSNK1E-205ENST00000405675 RTCBQ9Y3I0 505 aaKnown RBP35.03■■■■□ 3.2
CSNK1E-205ENST00000405675 ZNF609O15014 1411 aa35.02■■■■□ 3.2
CSNK1E-205ENST00000405675 HIP1O00291 1037 aa35.02■■■■□ 3.2
CSNK1E-205ENST00000405675 NIP7Q9Y221 180 aaKnown RBP eCLIP35.02■■■■□ 3.2
CSNK1E-205ENST00000405675 IRS4O14654 1257 aaPredicted RBP35.02■■■■□ 3.2
CSNK1E-205ENST00000405675 TTLL11Q8NHH1 800 aa35.02■■■■□ 3.2
CSNK1E-205ENST00000405675 ZNF652Q9Y2D9 606 aa35.02■■■■□ 3.2
CSNK1E-205ENST00000405675 C4BP0C0L5 1744 aa35.01■■■■□ 3.2
CSNK1E-205ENST00000405675 A0A0D9SFI3 127 aa35.01■■■■□ 3.2
CSNK1E-205ENST00000405675 FAM177BA6PVY3 158 aa35.01■■■■□ 3.2
CSNK1E-205ENST00000405675 SNX14Q9Y5W7 946 aa35.01■■■■□ 3.2
CSNK1E-205ENST00000405675 IFIT5Q13325 482 aaKnown RBP35■■■■□ 3.19
CSNK1E-205ENST00000405675 RASEFQ8IZ41 740 aa35■■■■□ 3.19
CSNK1E-205ENST00000405675 HAUS7Q99871 368 aa35■■■■□ 3.19
CSNK1E-205ENST00000405675 CLEC4GQ6UXB4 293 aa35■■■■□ 3.19
CSNK1E-205ENST00000405675 DNAJC2Q99543 621 aaKnown RBP35■■■■□ 3.19
CSNK1E-205ENST00000405675 UPF3BQ9BZI7 483 aaKnown RBP35■■■■□ 3.19
CSNK1E-205ENST00000405675 GREM2Q9H772 168 aa35■■■■□ 3.19
CSNK1E-205ENST00000405675 CTSWP56202 376 aa34.99■■■■□ 3.19
CSNK1E-205ENST00000405675 BCORQ6W2J9 1755 aa34.99■■■■□ 3.19
CSNK1E-205ENST00000405675 AK7Q96M32 723 aa34.99■■■■□ 3.19
CSNK1E-205ENST00000405675 SRP68Q9UHB9 627 aaKnown RBP34.99■■■■□ 3.19
CSNK1E-205ENST00000405675 SLC27A3Q5K4L6 730 aa34.98■■■■□ 3.19
CSNK1E-205ENST00000405675 USPL1Q5W0Q7 1092 aa34.98■■■■□ 3.19
CSNK1E-205ENST00000405675 SNRKQ9NRH2 765 aa34.98■■■■□ 3.19
CSNK1E-205ENST00000405675 NARFQ9UHQ1 456 aa34.98■■■■□ 3.19
CSNK1E-205ENST00000405675 A0A1B0GUL7 405 aa34.97■■■■□ 3.19
CSNK1E-205ENST00000405675 PARP10Q53GL7 1025 aa34.97■■■■□ 3.19
CSNK1E-205ENST00000405675 ARHGEF1Q92888 912 aaKnown RBP34.97■■■■□ 3.19
CSNK1E-205ENST00000405675 BCL2L12Q9HB09 334 aa34.97■■■■□ 3.19
CSNK1E-205ENST00000405675 CEP126Q9P2H0 1117 aa34.97■■■■□ 3.19
CSNK1E-205ENST00000405675 TAF7LQ5H9L4 462 aa34.97■■■■□ 3.19
CSNK1E-205ENST00000405675 UTP14AQ9BVJ6 771 aaKnown RBP34.97■■■■□ 3.19
CSNK1E-205ENST00000405675 FBXO3Q9UK99 471 aa34.97■■■■□ 3.19
CSNK1E-205ENST00000405675 PROM2Q8N271 834 aa34.96■■■■□ 3.19
CSNK1E-205ENST00000405675 CCDC171Q6TFL3 1326 aa34.96■■■■□ 3.19
CSNK1E-205ENST00000405675 PHF14O94880 888 aa34.96■■■■□ 3.19
CSNK1E-205ENST00000405675 ITGA6P23229 1130 aa34.96■■■■□ 3.19
CSNK1E-205ENST00000405675 DEKP35659 375 aaKnown RBP34.94■■■■□ 3.18
CSNK1E-205ENST00000405675 RAB3GAP1Q15042 981 aa34.94■■■■□ 3.18
CSNK1E-205ENST00000405675 MED23Q9ULK4 1368 aa34.94■■■■□ 3.18
CSNK1E-205ENST00000405675 CHGBP05060 677 aa34.94■■■■□ 3.18
CSNK1E-205ENST00000405675 TXNRD1Q16881 649 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms