RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 CYP7A1P22680 504 aa13.68□□□□□ -0.22
RAPGEF3-204ENST00000405493 RBM26Q5T8P6 1007 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-204ENST00000405493 PHAXQ9H814 394 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-204ENST00000405493 SLC12A7Q9Y666 1083 aa13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 PDE8AO60658 829 aa13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 MPNDQ8N594 471 aa13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 TMEM87AQ8NBN3 555 aa13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 ACBD3Q9H3P7 528 aa13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 SYCP1Q15431 976 aa13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 PIBF1Q8WXW3 757 aa13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 DENND2AQ9ULE3 1009 aa13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 GNAT2P19087 354 aa13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 DDX11Q96FC9 970 aa13.67□□□□□ -0.22
RAPGEF3-204ENST00000405493 METP08581 1390 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 LDHBP07195 334 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 UFL1O94874 794 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 RDXP35241 583 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 MFSD6Q6ZSS7 791 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 DACH1Q9UI36 760 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 CLASP1Q7Z460 1538 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 F8W031 263 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 IFIT3O14879 490 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 CCP110O43303 1012 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 RTL1A6NKG5 1358 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 RIMBP2O15034 1052 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 SEPT12Q8IYM1 358 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 ZHX3Q9H4I2 956 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 JCADQ9P266 1359 aa13.66□□□□□ -0.22
RAPGEF3-204ENST00000405493 IL13P35225 146 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 CLCN1P35523 988 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 ERCC6L2Q5T890 1561 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 KIAA0232Q92628 1395 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 TRIM27P14373 513 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 TTC6Q86TZ1 520 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 ERBB4Q15303 1308 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 WDR17Q8IZU2 1322 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 H7C1D1 291 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 CCDC83Q8IWF9 413 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 ANKARQ7Z5J8 1434 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 SBNO2Q9Y2G9 1366 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 GNAQP50148 359 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 TMEM266Q2M3C6 531 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 TMTC2Q8N394 836 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 BCS1LQ9Y276 419 aa13.65□□□□□ -0.22
RAPGEF3-204ENST00000405493 INSRP06213 1382 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 DESP17661 470 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 DNAJC10Q8IXB1 793 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 TNPO1Q92973 898 aaKnown RBP13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 KRT23Q9C075 422 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 CNNM2Q9H8M5 875 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 CFAP45Q9UL16 551 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 HSP90B2PQ58FF3 399 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 BRINP3Q76B58 766 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 PAF1Q8N7H5 531 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 CCDC112Q8NEF3 446 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 SNRKQ9NRH2 765 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 TCIRG1Q13488 830 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 NUP62CLQ9H1M0 184 aa13.64□□□□□ -0.23
RAPGEF3-204ENST00000405493 KIF24Q5T7B8 1368 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 TRIM37O94972 964 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 SSBP05455 408 aaKnown RBP eCLIP13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 TSPY3P0CV98 308 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 TSPY8P0CW00 308 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 MATR3P43243 847 aaKnown RBP eCLIP13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 TBC1D32Q96NH3 1257 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 SPATA31A6Q5VVP1 1343 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 PPFIBP1Q86W92 1011 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 RHPN1Q8TCX5 695 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 METTL22Q9BUU2 404 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 ABCC3O15438 1527 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 SYCE3A1L190 88 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 PHKG2P15735 406 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 CWC15Q9P013 229 aaKnown RBP13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 AFF2P51816 1311 aa13.63□□□□□ -0.23
RAPGEF3-204ENST00000405493 CDR1P51861 262 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 ESR2Q92731 530 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 TANGO6Q9C0B7 1094 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 PICK1Q9NRD5 415 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 CCDC194A0A1B0GVG4 234 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 PODXL2Q9NZ53 605 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 HMG20BQ9P0W2 317 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 WWC3Q9ULE0 1092 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 TBC1D22AQ8WUA7 517 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 UPF3BQ9BZI7 483 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 TMC4Q7Z404 712 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 ARHGEF25Q86VW2 580 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 WDR66Q8TBY9 1149 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 ZNHIT6Q9NWK9 470 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 KAT6BQ8WYB5 2073 aa13.62□□□□□ -0.23
RAPGEF3-204ENST00000405493 HIBADHP31937 336 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms