RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
PDE4D-206ENST00000405053 SIRT2Q8IXJ6 389 aa13.51□□□□□ -0.25
PDE4D-206ENST00000405053 SSH3Q8TE77 659 aa13.51□□□□□ -0.25
PDE4D-206ENST00000405053 SPON1Q9HCB6 807 aa13.51□□□□□ -0.25
PDE4D-206ENST00000405053 ANKRD31Q8N7Z5 1873 aa13.5□□□□□ -0.25
PDE4D-206ENST00000405053 PDE6BP35913 854 aa13.5□□□□□ -0.25
PDE4D-206ENST00000405053 POLA2Q14181 598 aa13.5□□□□□ -0.25
PDE4D-206ENST00000405053 CCDC152Q4G0S7 254 aa13.5□□□□□ -0.25
PDE4D-206ENST00000405053 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
PDE4D-206ENST00000405053 PDZRN3Q9UPQ7 1066 aa13.5□□□□□ -0.25
PDE4D-206ENST00000405053 KIF13BQ9NQT8 1826 aa13.49□□□□□ -0.25
PDE4D-206ENST00000405053 PNMA6EA0A0J9YXQ4 647 aa13.49□□□□□ -0.25
PDE4D-206ENST00000405053 SRGAP3O43295 1099 aa13.49□□□□□ -0.25
PDE4D-206ENST00000405053 HDAC1Q13547 482 aaPredicted RBP13.49□□□□□ -0.25
PDE4D-206ENST00000405053 HMMRO75330 724 aa13.48□□□□□ -0.25
PDE4D-206ENST00000405053 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
PDE4D-206ENST00000405053 RFX5P48382 616 aaPredicted RBP13.48□□□□□ -0.25
PDE4D-206ENST00000405053 FAM161AQ3B820 660 aa13.48□□□□□ -0.25
PDE4D-206ENST00000405053 GREM2Q9H772 168 aa13.48□□□□□ -0.25
PDE4D-206ENST00000405053 SRGNP10124 158 aa13.47□□□□□ -0.25
PDE4D-206ENST00000405053 ITGA6P23229 1130 aa13.47□□□□□ -0.25
PDE4D-206ENST00000405053 COPRSQ9NQ92 184 aa13.47□□□□□ -0.25
PDE4D-206ENST00000405053 CD2APQ9Y5K6 639 aa13.47□□□□□ -0.25
PDE4D-206ENST00000405053 TGFB2P61812 414 aa13.46□□□□□ -0.25
PDE4D-206ENST00000405053 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.25
PDE4D-206ENST00000405053 IFIT5Q13325 482 aaKnown RBP13.46□□□□□ -0.25
PDE4D-206ENST00000405053 CCDC57Q2TAC2 916 aa13.46□□□□□ -0.25
PDE4D-206ENST00000405053 CRAMP1Q96RY5 1269 aa13.46□□□□□ -0.25
PDE4D-206ENST00000405053 PPP4R2Q9NY27 417 aa13.46□□□□□ -0.25
PDE4D-206ENST00000405053 ANKRD18BA2A2Z9 1011 aa13.45□□□□□ -0.26
PDE4D-206ENST00000405053 NPR1P16066 1061 aa13.45□□□□□ -0.26
PDE4D-206ENST00000405053 DDX46Q7L014 1031 aaKnown RBP13.45□□□□□ -0.26
PDE4D-206ENST00000405053 RPGRQ92834 1020 aaKnown RBP13.45□□□□□ -0.26
PDE4D-206ENST00000405053 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
PDE4D-206ENST00000405053 CCDC85AQ96PX6 553 aaPredicted RBP13.45□□□□□ -0.26
PDE4D-206ENST00000405053 CDC5LQ99459 802 aaKnown RBP13.45□□□□□ -0.26
PDE4D-206ENST00000405053 RWDD1Q9H446 243 aaPredicted RBP13.45□□□□□ -0.26
PDE4D-206ENST00000405053 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
PDE4D-206ENST00000405053 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
PDE4D-206ENST00000405053 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
PDE4D-206ENST00000405053 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
PDE4D-206ENST00000405053 LRP5O75197 1615 aa13.45□□□□□ -0.26
PDE4D-206ENST00000405053 SRCAPQ6ZRS2 3230 aa13.45□□□□□ -0.26
PDE4D-206ENST00000405053 COL11A2P13942 1736 aaPredicted RBP13.44□□□□□ -0.26
PDE4D-206ENST00000405053 H0YIN7 160 aa13.44□□□□□ -0.26
PDE4D-206ENST00000405053 IGHDP01880 384 aa13.44□□□□□ -0.26
PDE4D-206ENST00000405053 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
PDE4D-206ENST00000405053 C2CD5Q86YS7 1000 aa13.44□□□□□ -0.26
PDE4D-206ENST00000405053 RBM17Q96I25 401 aaKnown RBP13.44□□□□□ -0.26
PDE4D-206ENST00000405053 DCTPP1Q9H773 170 aa13.44□□□□□ -0.26
PDE4D-206ENST00000405053 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
PDE4D-206ENST00000405053 CIAO1O76071 339 aa13.43□□□□□ -0.26
PDE4D-206ENST00000405053 KCNA3P22001 575 aa13.43□□□□□ -0.26
PDE4D-206ENST00000405053 ALDH1B1P30837 517 aa13.43□□□□□ -0.26
PDE4D-206ENST00000405053 RPS8P62241 208 aaKnown RBP13.43□□□□□ -0.26
PDE4D-206ENST00000405053 GRAPQ13588 217 aa13.43□□□□□ -0.26
PDE4D-206ENST00000405053 GRAPLQ8TC17 118 aaPredicted RBP13.43□□□□□ -0.26
PDE4D-206ENST00000405053 CELF1Q92879 486 aaKnown RBP13.43□□□□□ -0.26
PDE4D-206ENST00000405053 PA2G4Q9UQ80 394 aaKnown RBP13.43□□□□□ -0.26
PDE4D-206ENST00000405053 GTF3C3Q9Y5Q9 886 aa13.43□□□□□ -0.26
PDE4D-206ENST00000405053 COL4A1P02462 1669 aa13.43□□□□□ -0.26
PDE4D-206ENST00000405053 DLEC1Q9Y238 1755 aa13.43□□□□□ -0.26
PDE4D-206ENST00000405053 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
PDE4D-206ENST00000405053 BBOX1O75936 387 aa13.42□□□□□ -0.26
PDE4D-206ENST00000405053 CHRNA5P30532 468 aa13.42□□□□□ -0.26
PDE4D-206ENST00000405053 ANKRD18AQ8IVF6 992 aa13.42□□□□□ -0.26
PDE4D-206ENST00000405053 SMC5Q8IY18 1101 aa13.42□□□□□ -0.26
PDE4D-206ENST00000405053 KLHDC4Q8TBB5 520 aa13.42□□□□□ -0.26
PDE4D-206ENST00000405053 GCC1Q96CN9 775 aa13.42□□□□□ -0.26
PDE4D-206ENST00000405053 ZNF594Q96JF6 807 aaPredicted RBP13.42□□□□□ -0.26
PDE4D-206ENST00000405053 BSDC1Q9NW68 430 aaPredicted RBP13.42□□□□□ -0.26
PDE4D-206ENST00000405053 EYA2O00167 538 aa13.41□□□□□ -0.26
PDE4D-206ENST00000405053 SURF6O75683 361 aaKnown RBP13.41□□□□□ -0.26
PDE4D-206ENST00000405053 DPEP1P16444 411 aa13.41□□□□□ -0.26
PDE4D-206ENST00000405053 IGHMBP2P38935 993 aaKnown RBP13.41□□□□□ -0.26
PDE4D-206ENST00000405053 HSP90AB4PQ58FF6 505 aa13.41□□□□□ -0.26
PDE4D-206ENST00000405053 TAF7LQ5H9L4 462 aa13.41□□□□□ -0.26
PDE4D-206ENST00000405053 LDHAL6AQ6ZMR3 332 aa13.41□□□□□ -0.26
PDE4D-206ENST00000405053 ATG9AQ7Z3C6 839 aa13.41□□□□□ -0.26
PDE4D-206ENST00000405053 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
PDE4D-206ENST00000405053 CNKSR1Q969H4 720 aa13.41□□□□□ -0.26
PDE4D-206ENST00000405053 CCDC136Q96JN2 1154 aa13.41□□□□□ -0.26
PDE4D-206ENST00000405053 RIPOR2Q9Y4F9 1068 aa13.41□□□□□ -0.26
PDE4D-206ENST00000405053 A0A0G2JLW4 131 aa13.4□□□□□ -0.26
PDE4D-206ENST00000405053 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
PDE4D-206ENST00000405053 IL15P40933 162 aaPredicted RBP13.4□□□□□ -0.26
PDE4D-206ENST00000405053 MPHOSPH8Q99549 860 aa13.4□□□□□ -0.26
PDE4D-206ENST00000405053 PUS3Q9BZE2 481 aaKnown RBP13.4□□□□□ -0.26
PDE4D-206ENST00000405053 TAF1P21675 1872 aa13.4□□□□□ -0.26
PDE4D-206ENST00000405053 G3BP1Q13283 466 aaKnown RBP eCLIP13.39□□□□□ -0.27
PDE4D-206ENST00000405053 LRRC24Q50LG9 513 aa13.39□□□□□ -0.27
PDE4D-206ENST00000405053 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
PDE4D-206ENST00000405053 ERC1Q8IUD2 1116 aa13.39□□□□□ -0.27
PDE4D-206ENST00000405053 ZNF622Q969S3 477 aaKnown RBP eCLIP13.39□□□□□ -0.27
PDE4D-206ENST00000405053 FHDC1Q9C0D6 1143 aaPredicted RBP13.39□□□□□ -0.27
PDE4D-206ENST00000405053 SIL1Q9H173 461 aa13.39□□□□□ -0.27
PDE4D-206ENST00000405053 EXOC6BQ9Y2D4 811 aa13.39□□□□□ -0.27
PDE4D-206ENST00000405053 SASH1O94885 1247 aa13.38□□□□□ -0.27
PDE4D-206ENST00000405053 B4GALNT3Q6L9W6 998 aa13.38□□□□□ -0.27
PDE4D-206ENST00000405053 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms