RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 CNNM3Q8NE01 707 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 MORC2Q9Y6X9 1032 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-202ENST00000405010 TULP1O00294 542 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-202ENST00000405010 ANXA1P04083 346 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 CSB-PGBD3P0DP91 1061 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 NAP1L1P55209 391 aaKnown RBP8.54□□□□□ -1.04
HDAC9-202ENST00000405010 PPP2R3AQ06190 1150 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 KCNG4Q8TDN1 519 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 KCNF1Q9H3M0 494 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 CENPHQ9H3R5 247 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 RNF216Q9NWF9 866 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-202ENST00000405010 IMPACTQ9P2X3 320 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 ELP1O95163 1332 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 A0A1B0GVL5 298 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 SYKP43405 635 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 ETF1P62495 437 aaKnown RBP8.54□□□□□ -1.04
HDAC9-202ENST00000405010 KARSQ15046 597 aaKnown RBP8.54□□□□□ -1.04
HDAC9-202ENST00000405010 CCDC148Q8NFR7 591 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 TM6SF1Q9BZW5 370 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 E9PCH4 1651 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 PTCH1Q13635 1447 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 PATL2C9JE40 543 aaKnown RBP8.53□□□□□ -1.04
HDAC9-202ENST00000405010 KMT5BQ4FZB7 885 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 GIMAP7Q8NHV1 300 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 HYPKQ9NX55 129 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 RAI14Q9P0K7 980 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 ORC3Q9UBD5 711 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-202ENST00000405010 ATP10AO60312 1499 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 IRX5P78411 483 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-202ENST00000405010 TTC5Q8N0Z6 440 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 MICALL1Q8N3F8 863 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 PUF60Q9UHX1 559 aaKnown RBP8.53□□□□□ -1.04
HDAC9-202ENST00000405010 FOXO3O43524 673 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 ZNF530Q6P9A1 599 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-202ENST00000405010 CERS3Q8IU89 383 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 XPO4Q9C0E2 1151 aaKnown RBP8.53□□□□□ -1.04
HDAC9-202ENST00000405010 PA2G4Q9UQ80 394 aaKnown RBP8.53□□□□□ -1.04
HDAC9-202ENST00000405010 CD109Q6YHK3 1445 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 IBSPP21815 317 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-202ENST00000405010 RPS6KB1P23443 525 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 PIP4K2AP48426 406 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-202ENST00000405010 ZNHIT6Q9NWK9 470 aaKnown RBP8.53□□□□□ -1.04
HDAC9-202ENST00000405010 EID1Q9Y6B2 187 aa8.53□□□□□ -1.04
HDAC9-202ENST00000405010 CTAGE15A4D2H0 777 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 SLC27A2O14975 620 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 CTIFO43310 598 aaKnown RBP8.52□□□□□ -1.05
HDAC9-202ENST00000405010 JAK2O60674 1132 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 CDKL5O76039 1030 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 CTAGE8P0CG41 777 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 CALRP27797 417 aaKnown RBP8.52□□□□□ -1.05
HDAC9-202ENST00000405010 CCDC102BQ68D86 513 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 CTAGE6Q86UF2 777 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 CTAGE4Q8IX94 777 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 KLHL34Q8N239 644 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 ERICH2A1L162 156 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 PTPDC1A2A3K4 754 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 BTBD11A6QL63 1104 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 GOLGA8BA8MQT2 603 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 SPTLC2O15270 562 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 MCM3P25205 808 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 CLCN6P51797 869 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 HDXQ7Z353 690 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 STAP2Q9UGK3 403 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 TPCN1Q9ULQ1 816 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 PBRM1Q86U86 1689 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 TTC21BQ7Z4L5 1316 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 RAPGEF3O95398 923 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 CCDC175P0C221 793 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 RHOXF2BP0C7M4 288 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 GTF2E1P29083 439 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-202ENST00000405010 FANCCQ00597 558 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 PTH1RQ03431 593 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 ARID5BQ14865 1188 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 NBPF11Q86T75 865 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 CEP112Q8N8E3 955 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 RHOXF2Q9BQY4 288 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 LZTFL1Q9NQ48 299 aa8.52□□□□□ -1.05
HDAC9-202ENST00000405010 LARGE1O95461 756 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 PNMA6AP0CW24 399 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-202ENST00000405010 MARCKSP29966 332 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-202ENST00000405010 FKBP4Q02790 459 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC9-202ENST00000405010 MTHFSDQ2M296 383 aaKnown RBP8.51□□□□□ -1.05
HDAC9-202ENST00000405010 IQCEQ6IPM2 695 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 KIAA1328Q86T90 577 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 CCDC47Q96A33 483 aaKnown RBP8.51□□□□□ -1.05
HDAC9-202ENST00000405010 FAM227BQ96M60 508 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 DRC1Q96MC2 740 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 MPHOSPH8Q99549 860 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 CDC25BP30305 580 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 IMMTQ16891 758 aaKnown RBP8.51□□□□□ -1.05
HDAC9-202ENST00000405010 ADCK5Q3MIX3 580 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 PLEKHO1Q53GL0 409 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-202ENST00000405010 CCDC181Q5TID7 509 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 RAB11FIP4Q86YS3 637 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 ABTB2Q8N961 1025 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 BAG1Q99933 345 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-202ENST00000405010 LSG1Q9H089 658 aaKnown RBP8.51□□□□□ -1.05
HDAC9-202ENST00000405010 ZSWIM6Q9HCJ5 1215 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 ZNF853P0CG23 659 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 MYL6BP14649 208 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms