RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 NPHP3Q7Z494 1330 aa18.35■□□□□ 0.53
ATG4B-205ENST00000404914 ADCY9O60503 1353 aa18.34■□□□□ 0.53
ATG4B-205ENST00000404914 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-205ENST00000404914 CEBPZQ03701 1054 aaKnown RBP18.34■□□□□ 0.53
ATG4B-205ENST00000404914 LRRC8AQ8IWT6 810 aa18.34■□□□□ 0.53
ATG4B-205ENST00000404914 DNAAF4Q8WXU2 420 aa18.34■□□□□ 0.53
ATG4B-205ENST00000404914 FTOQ9C0B1 505 aaKnown RBP eCLIP18.34■□□□□ 0.53
ATG4B-205ENST00000404914 DDX19AQ9NUU7 478 aaKnown RBP18.34■□□□□ 0.53
ATG4B-205ENST00000404914 TRMT1Q9NXH9 659 aaKnown RBP18.34■□□□□ 0.53
ATG4B-205ENST00000404914 MORC2Q9Y6X9 1032 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-205ENST00000404914 IQCB1Q15051 598 aa18.34■□□□□ 0.53
ATG4B-205ENST00000404914 CLASRPQ8N2M8 674 aaKnown RBP18.34■□□□□ 0.53
ATG4B-205ENST00000404914 USP16Q9Y5T5 823 aa18.34■□□□□ 0.53
ATG4B-205ENST00000404914 SCAND2PQ9GZW5 306 aaPredicted RBP18.33■□□□□ 0.53
ATG4B-205ENST00000404914 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-205ENST00000404914 ZNF589Q86UQ0 364 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-205ENST00000404914 AACSQ86V21 672 aa18.33■□□□□ 0.52
ATG4B-205ENST00000404914 ERCC4Q92889 916 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-205ENST00000404914 CCDC8Q9H0W5 538 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-205ENST00000404914 PAXBP1Q9Y5B6 917 aa18.33■□□□□ 0.52
ATG4B-205ENST00000404914 HTATSF1O43719 755 aaKnown RBP18.32■□□□□ 0.52
ATG4B-205ENST00000404914 CHGBP05060 677 aa18.32■□□□□ 0.52
ATG4B-205ENST00000404914 FBXO38Q6PIJ6 1188 aa18.32■□□□□ 0.52
ATG4B-205ENST00000404914 LTBP4Q8N2S1 1624 aa18.32■□□□□ 0.52
ATG4B-205ENST00000404914 NPHP1O15259 732 aa18.32■□□□□ 0.52
ATG4B-205ENST00000404914 IFIT2P09913 472 aaKnown RBP18.32■□□□□ 0.52
ATG4B-205ENST00000404914 FOSBP53539 338 aa18.32■□□□□ 0.52
ATG4B-205ENST00000404914 ELF2Q15723 593 aa18.32■□□□□ 0.52
ATG4B-205ENST00000404914 BLOC1S2Q6QNY1 142 aa18.32■□□□□ 0.52
ATG4B-205ENST00000404914 SYTL4Q96C24 671 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-205ENST00000404914 EDC3Q96F86 508 aaKnown RBP18.32■□□□□ 0.52
ATG4B-205ENST00000404914 C19orf44Q9H6X5 657 aa18.32■□□□□ 0.52
ATG4B-205ENST00000404914 RPS6KB1P23443 525 aa18.31■□□□□ 0.52
ATG4B-205ENST00000404914 EAF2Q96CJ1 260 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-205ENST00000404914 LGR6Q9HBX8 967 aa18.31■□□□□ 0.52
ATG4B-205ENST00000404914 GABPB1Q06547 395 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-205ENST00000404914 NYAP1Q6ZVC0 841 aa18.31■□□□□ 0.52
ATG4B-205ENST00000404914 FILIP1Q7Z7B0 1213 aa18.31■□□□□ 0.52
ATG4B-205ENST00000404914 EVI5LQ96CN4 794 aa18.31■□□□□ 0.52
ATG4B-205ENST00000404914 RBM6P78332 1123 aaKnown RBP18.3■□□□□ 0.52
ATG4B-205ENST00000404914 RESTQ13127 1097 aa18.3■□□□□ 0.52
ATG4B-205ENST00000404914 LRRN4CLQ8ND94 238 aa18.3■□□□□ 0.52
ATG4B-205ENST00000404914 BRF1Q92994 677 aa18.3■□□□□ 0.52
ATG4B-205ENST00000404914 SASH1O94885 1247 aa18.3■□□□□ 0.52
ATG4B-205ENST00000404914 CCZ1BP86790 482 aa18.3■□□□□ 0.52
ATG4B-205ENST00000404914 CCZ1P86791 482 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-205ENST00000404914 TERF2Q15554 542 aa18.3■□□□□ 0.52
ATG4B-205ENST00000404914 FBXW7Q969H0 707 aa18.3■□□□□ 0.52
ATG4B-205ENST00000404914 BOLA2Q9H3K6 86 aa18.3■□□□□ 0.52
ATG4B-205ENST00000404914 PPFIA3O75145 1194 aa18.29■□□□□ 0.52
ATG4B-205ENST00000404914 SKILP12757 684 aa18.29■□□□□ 0.52
ATG4B-205ENST00000404914 PDCP20941 246 aa18.29■□□□□ 0.52
ATG4B-205ENST00000404914 CWF19L2Q2TBE0 894 aaKnown RBP18.29■□□□□ 0.52
ATG4B-205ENST00000404914 ORAI2Q96SN7 254 aa18.29■□□□□ 0.52
ATG4B-205ENST00000404914 GOLPH3LQ9H4A5 285 aa18.29■□□□□ 0.52
ATG4B-205ENST00000404914 EIF4A1P60842 406 aaKnown RBP18.29■□□□□ 0.52
ATG4B-205ENST00000404914 HSP90AB4PQ58FF6 505 aa18.29■□□□□ 0.52
ATG4B-205ENST00000404914 ZNF446Q9NWS9 450 aa18.28■□□□□ 0.52
ATG4B-205ENST00000404914 CCDC69A6NI79 296 aa18.28■□□□□ 0.52
ATG4B-205ENST00000404914 PROSER3Q2NL68 480 aa18.28■□□□□ 0.52
ATG4B-205ENST00000404914 GTF2E1P29083 439 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-205ENST00000404914 HOXC9P31274 260 aa18.28■□□□□ 0.52
ATG4B-205ENST00000404914 PTPN14Q15678 1187 aa18.28■□□□□ 0.52
ATG4B-205ENST00000404914 ZNF397Q8NF99 534 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-205ENST00000404914 LRRC2Q9BYS8 371 aa18.28■□□□□ 0.52
ATG4B-205ENST00000404914 COL15A1P39059 1388 aa18.27■□□□□ 0.52
ATG4B-205ENST00000404914 CDC25BP30305 580 aa18.27■□□□□ 0.52
ATG4B-205ENST00000404914 KLHDC4Q8TBB5 520 aa18.27■□□□□ 0.52
ATG4B-205ENST00000404914 TMEM51Q9NW97 253 aa18.27■□□□□ 0.52
ATG4B-205ENST00000404914 NDUFB9Q9Y6M9 179 aa18.27■□□□□ 0.52
ATG4B-205ENST00000404914 SIL1Q9H173 461 aa18.27■□□□□ 0.51
ATG4B-205ENST00000404914 PSMA5P28066 241 aa18.26■□□□□ 0.51
ATG4B-205ENST00000404914 MTX1Q13505 466 aa18.26■□□□□ 0.51
ATG4B-205ENST00000404914 DHX40Q8IX18 779 aaKnown RBP18.26■□□□□ 0.51
ATG4B-205ENST00000404914 BBXQ8WY36 941 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-205ENST00000404914 KAZALD1Q96I82 304 aa18.26■□□□□ 0.51
ATG4B-205ENST00000404914 PIK3C2AO00443 1686 aa18.26■□□□□ 0.51
ATG4B-205ENST00000404914 GOLGA6L19H0YKK7 550 aa18.26■□□□□ 0.51
ATG4B-205ENST00000404914 ADD1P35611 737 aaKnown RBP18.26■□□□□ 0.51
ATG4B-205ENST00000404914 ESCO1Q5FWF5 840 aa18.26■□□□□ 0.51
ATG4B-205ENST00000404914 SARM1Q6SZW1 724 aa18.26■□□□□ 0.51
ATG4B-205ENST00000404914 KRT222Q8N1A0 295 aa18.26■□□□□ 0.51
ATG4B-205ENST00000404914 FSD1Q9BTV5 496 aa18.26■□□□□ 0.51
ATG4B-205ENST00000404914 FAM53CQ9NYF3 392 aa18.26■□□□□ 0.51
ATG4B-205ENST00000404914 ERICH4A6NGS2 130 aa18.25■□□□□ 0.51
ATG4B-205ENST00000404914 NLRP6P59044 892 aa18.25■□□□□ 0.51
ATG4B-205ENST00000404914 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
ATG4B-205ENST00000404914 MST1RQ04912 1400 aa18.25■□□□□ 0.51
ATG4B-205ENST00000404914 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
ATG4B-205ENST00000404914 PRAMEF22A3QJZ6 481 aa18.25■□□□□ 0.51
ATG4B-205ENST00000404914 ATF3P18847 181 aa18.25■□□□□ 0.51
ATG4B-205ENST00000404914 CCAR2Q8N163 923 aaKnown RBP18.25■□□□□ 0.51
ATG4B-205ENST00000404914 NGDNQ8NEJ9 315 aaKnown RBP18.25■□□□□ 0.51
ATG4B-205ENST00000404914 GTF3C6Q969F1 213 aa18.25■□□□□ 0.51
ATG4B-205ENST00000404914 MRFAP1L1Q96HT8 127 aa18.25■□□□□ 0.51
ATG4B-205ENST00000404914 C9orf78Q9NZ63 289 aaPredicted RBP18.25■□□□□ 0.51
ATG4B-205ENST00000404914 FGD1P98174 961 aa18.24■□□□□ 0.51
ATG4B-205ENST00000404914 C1orf167Q5SNV9 1468 aa18.24■□□□□ 0.51
ATG4B-205ENST00000404914 ANKARQ7Z5J8 1434 aa18.24■□□□□ 0.51
ATG4B-205ENST00000404914 DDX17Q92841 729 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms