RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 PIK3C2AO00443 1686 aa9.12□□□□□ -0.95
HDAC9-201ENST00000401921 LETM1O95202 739 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-201ENST00000401921 ADCY5O95622 1261 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 CHGBP05060 677 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 HSPA2P54652 639 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 CCT2P78371 535 aaKnown RBP9.11□□□□□ -0.95
HDAC9-201ENST00000401921 GUCY1B3Q02153 619 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 TNNI3KQ59H18 835 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 BRF1Q92994 677 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 ZNF594Q96JF6 807 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-201ENST00000401921 DCAF5Q96JK2 942 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 FPGT-TNNI3KV9GXZ4 949 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 GTF2E1P29083 439 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-201ENST00000401921 MTX1Q13505 466 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 ZRSR1Q15695 479 aaKnown RBP9.11□□□□□ -0.95
HDAC9-201ENST00000401921 CHST3Q7LGC8 479 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 TTC14Q96N46 770 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 MAP7D2Q96T17 732 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 ZSWIM6Q9HCJ5 1215 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 ARHGAP23Q9P227 1491 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 SLIT1O75093 1534 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 IFIT1P09914 478 aaKnown RBP9.11□□□□□ -0.95
HDAC9-201ENST00000401921 NECTIN1Q15223 517 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 Q6ZUG5 572 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 KAZALD1Q96I82 304 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 TNMDQ9H2S6 317 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 PRDM10Q9NQV6 1147 aa9.11□□□□□ -0.95
HDAC9-201ENST00000401921 DBNLQ9UJU6 430 aaKnown RBP9.11□□□□□ -0.95
HDAC9-201ENST00000401921 FAM177BA6PVY3 158 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 EPB41L2O43491 1005 aaKnown RBP9.1□□□□□ -0.95
HDAC9-201ENST00000401921 CCDC192P0DO97 292 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 CCDC57Q2TAC2 916 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 SLFNL1Q499Z3 407 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 CDC37L1Q7L3B6 337 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 MAP4K1Q92918 833 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 NUP62CLQ9H1M0 184 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 TTC12Q9H892 705 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-201ENST00000401921 CEP126Q9P2H0 1117 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 MTMR6Q9Y217 621 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 ZKSCAN5Q9Y2L8 839 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 ADGRL3Q9HAR2 1447 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 APPP05067 770 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 KRT32Q14532 448 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 TTLL7Q6ZT98 887 aa9.1□□□□□ -0.95
HDAC9-201ENST00000401921 CYP27B1O15528 508 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 HAND2P61296 217 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 SF3A1Q15459 793 aaKnown RBP9.09□□□□□ -0.95
HDAC9-201ENST00000401921 SASS6Q6UVJ0 657 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 SMAP1Q8IYB5 467 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-201ENST00000401921 CWC25Q9NXE8 425 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-201ENST00000401921 TAF6LQ9Y6J9 622 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 PXDNQ92626 1479 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 NPHP4O75161 1426 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-201ENST00000401921 JAK2O60674 1132 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 RPS6KB1P23443 525 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 PDIA6Q15084 440 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 MCMDC2Q4G0Z9 681 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 RAB11FIP4Q86YS3 637 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 ZCRB1Q8TBF4 217 aaKnown RBP9.09□□□□□ -0.95
HDAC9-201ENST00000401921 TM6SF1Q9BZW5 370 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 NOL7Q9UMY1 257 aaKnown RBP9.09□□□□□ -0.95
HDAC9-201ENST00000401921 GPTP24298 496 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
HDAC9-201ENST00000401921 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 HSP90AB3PQ58FF7 597 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 TTC39AQ5SRH9 613 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 CADPS2Q86UW7 1296 aa9.09□□□□□ -0.95
HDAC9-201ENST00000401921 U3KPZ7 1027 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-201ENST00000401921 FMN2Q9NZ56 1722 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 PXDNLA1KZ92 1463 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 UQCRHLA0A096LP55 91 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 UQCRHP07919 91 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 CCDC158Q5M9N0 1113 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 TRIM5Q9C035 493 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 DACT1Q9NYF0 836 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 KIF3AQ9Y496 699 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 GOLGA6L6A8MZA4 724 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 OFD1O75665 1012 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 PLBD2Q8NHP8 589 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 HMG20BQ9P0W2 317 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 FER1L4A9Z1Z3 1794 aa9.08□□□□□ -0.96
HDAC9-201ENST00000401921 CPLX1O14810 134 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 TAF5LO75529 589 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 GNL2Q13823 731 aaKnown RBP9.07□□□□□ -0.96
HDAC9-201ENST00000401921 C17orf53Q8N3J3 647 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-201ENST00000401921 SCAND2PQ9GZW5 306 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-201ENST00000401921 TOMM22Q9NS69 142 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 PAG1Q9NWQ8 432 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.07□□□□□ -0.96
HDAC9-201ENST00000401921 TOPAZ1Q8N9V7 1692 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 GOLGA6L19H0YKK7 550 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 ATP5JP18859 108 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 APOBRQ0VD83 1088 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 COL9A3Q14050 684 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-201ENST00000401921 TTC6Q86TZ1 520 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 IPO4Q8TEX9 1081 aaKnown RBP9.07□□□□□ -0.96
HDAC9-201ENST00000401921 COPRSQ9NQ92 184 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 RPAP1Q9BWH6 1393 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-201ENST00000401921 BECN2A8MW95 431 aa9.07□□□□□ -0.96
HDAC9-201ENST00000401921 RGPD1P0DJD0 1748 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms