RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 CCDC57Q2TAC2 916 aa14.85□□□□□ -0.03
CLIP4-203ENST00000401617 HAUS7Q99871 368 aa14.85□□□□□ -0.03
CLIP4-203ENST00000401617 TBC1D2BQ9UPU7 963 aa14.85□□□□□ -0.03
CLIP4-203ENST00000401617 GPTP24298 496 aa14.84□□□□□ -0.03
CLIP4-203ENST00000401617 MCM2P49736 904 aa14.84□□□□□ -0.03
CLIP4-203ENST00000401617 KIAA1211Q6ZU35 1233 aa14.84□□□□□ -0.03
CLIP4-203ENST00000401617 TICAM2Q86XR7 235 aa14.84□□□□□ -0.03
CLIP4-203ENST00000401617 SYNE4Q8N205 404 aa14.84□□□□□ -0.03
CLIP4-203ENST00000401617 TTLL11Q8NHH1 800 aa14.84□□□□□ -0.03
CLIP4-203ENST00000401617 UBN2Q6ZU65 1347 aa14.84□□□□□ -0.03
CLIP4-203ENST00000401617 NEK4P51957 841 aa14.84□□□□□ -0.03
CLIP4-203ENST00000401617 ARXQ96QS3 562 aa14.84□□□□□ -0.03
CLIP4-203ENST00000401617 PUS3Q9BZE2 481 aaKnown RBP14.84□□□□□ -0.03
CLIP4-203ENST00000401617 SPEF2Q9C093 1822 aa14.83□□□□□ -0.03
CLIP4-203ENST00000401617 NMIQ13287 307 aaPredicted RBP14.83□□□□□ -0.04
CLIP4-203ENST00000401617 BCORQ6W2J9 1755 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 MED23Q9ULK4 1368 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 CAMTA2O94983 1202 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 CTSWP56202 376 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 PTH1RQ03431 593 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 IFIT5Q13325 482 aaKnown RBP14.83□□□□□ -0.04
CLIP4-203ENST00000401617 RAB3GAP1Q15042 981 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 CERKQ8TCT0 537 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 AK7Q96M32 723 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 FAM227BQ96M60 508 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 FSD1Q9BTV5 496 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 USP21Q9UK80 565 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 SNX14Q9Y5W7 946 aa14.83□□□□□ -0.04
CLIP4-203ENST00000401617 IRS4O14654 1257 aaPredicted RBP14.82□□□□□ -0.04
CLIP4-203ENST00000401617 HSP90AA1P07900 732 aaKnown RBP14.82□□□□□ -0.04
CLIP4-203ENST00000401617 CEP126Q9P2H0 1117 aa14.82□□□□□ -0.04
CLIP4-203ENST00000401617 NHSQ6T4R5 1651 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 PDE8AO60658 829 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 TIMM10P62072 90 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLIP4-203ENST00000401617 TRMT112Q9UI30 125 aaKnown RBP14.81□□□□□ -0.04
CLIP4-203ENST00000401617 CCDC171Q6TFL3 1326 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 BTAF1O14981 1849 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 A0A0D9SFI3 127 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 A0A0G2JS52 829 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 NECTIN1Q15223 517 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 RASEFQ8IZ41 740 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 EDC3Q96F86 508 aaKnown RBP14.81□□□□□ -0.04
CLIP4-203ENST00000401617 CWC22Q9HCG8 908 aaKnown RBP14.81□□□□□ -0.04
CLIP4-203ENST00000401617 RIPOR2Q9Y4F9 1068 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 LAMB2P55268 1798 aa14.81□□□□□ -0.04
CLIP4-203ENST00000401617 A0A1B0GUL7 405 aa14.8□□□□□ -0.04
CLIP4-203ENST00000401617 MCM4P33991 863 aa14.8□□□□□ -0.04
CLIP4-203ENST00000401617 CUL4AQ13619 759 aa14.8□□□□□ -0.04
CLIP4-203ENST00000401617 AKAP2Q9Y2D5 859 aa14.8□□□□□ -0.04
CLIP4-203ENST00000401617 LRP5O75197 1615 aa14.8□□□□□ -0.04
CLIP4-203ENST00000401617 DDX60Q8IY21 1712 aaKnown RBP14.8□□□□□ -0.04
CLIP4-203ENST00000401617 RIC1Q4ADV7 1423 aa14.8□□□□□ -0.04
CLIP4-203ENST00000401617 PARP10Q53GL7 1025 aa14.8□□□□□ -0.04
CLIP4-203ENST00000401617 TMX3Q96JJ7 454 aa14.8□□□□□ -0.04
CLIP4-203ENST00000401617 NEUROD6Q96NK8 337 aa14.8□□□□□ -0.04
CLIP4-203ENST00000401617 GREM2Q9H772 168 aa14.8□□□□□ -0.04
CLIP4-203ENST00000401617 ITGA6P23229 1130 aa14.79□□□□□ -0.04
CLIP4-203ENST00000401617 SUSD4Q5VX71 490 aa14.79□□□□□ -0.04
CLIP4-203ENST00000401617 KBTBD3Q8NAB2 608 aa14.79□□□□□ -0.04
CLIP4-203ENST00000401617 TTC14Q96N46 770 aa14.79□□□□□ -0.04
CLIP4-203ENST00000401617 TM6SF1Q9BZW5 370 aa14.79□□□□□ -0.04
CLIP4-203ENST00000401617 FOXD4L1Q9NU39 408 aa14.79□□□□□ -0.04
CLIP4-203ENST00000401617 SBF2Q86WG5 1849 aa14.79□□□□□ -0.04
CLIP4-203ENST00000401617 ANKRD18BA2A2Z9 1011 aa14.78□□□□□ -0.04
CLIP4-203ENST00000401617 RGL2O15211 777 aa14.78□□□□□ -0.04
CLIP4-203ENST00000401617 CLEC17AQ6ZS10 378 aa14.78□□□□□ -0.04
CLIP4-203ENST00000401617 TNPO1Q92973 898 aaKnown RBP14.78□□□□□ -0.04
CLIP4-203ENST00000401617 CNTNAP4Q9C0A0 1308 aa14.78□□□□□ -0.04
CLIP4-203ENST00000401617 LINC00116Q8NCU8 138 aa14.78□□□□□ -0.04
CLIP4-203ENST00000401617 SH3TC1Q8TE82 1336 aa14.77□□□□□ -0.04
CLIP4-203ENST00000401617 ONECUT3O60422 494 aaPredicted RBP14.77□□□□□ -0.04
CLIP4-203ENST00000401617 CYP2E1P05181 493 aaPredicted RBP14.77□□□□□ -0.04
CLIP4-203ENST00000401617 TAF7LQ5H9L4 462 aa14.77□□□□□ -0.04
CLIP4-203ENST00000401617 CLEC4GQ6UXB4 293 aa14.77□□□□□ -0.04
CLIP4-203ENST00000401617 CCDC85AQ96PX6 553 aaPredicted RBP14.77□□□□□ -0.04
CLIP4-203ENST00000401617 DNAJC2Q99543 621 aaKnown RBP14.77□□□□□ -0.04
CLIP4-203ENST00000401617 UTP14AQ9BVJ6 771 aaKnown RBP14.77□□□□□ -0.04
CLIP4-203ENST00000401617 UPF3BQ9BZI7 483 aaKnown RBP14.77□□□□□ -0.04
CLIP4-203ENST00000401617 PAG1Q9NWQ8 432 aa14.77□□□□□ -0.04
CLIP4-203ENST00000401617 RBM8AQ9Y5S9 174 aaKnown RBP14.77□□□□□ -0.04
CLIP4-203ENST00000401617 NDUFB9Q9Y6M9 179 aa14.77□□□□□ -0.04
CLIP4-203ENST00000401617 AKAP11Q9UKA4 1901 aa14.77□□□□□ -0.05
CLIP4-203ENST00000401617 TAF5LO75529 589 aa14.77□□□□□ -0.05
CLIP4-203ENST00000401617 RC3H1Q5TC82 1133 aaKnown RBP14.77□□□□□ -0.05
CLIP4-203ENST00000401617 USPL1Q5W0Q7 1092 aa14.77□□□□□ -0.05
CLIP4-203ENST00000401617 ZNF589Q86UQ0 364 aaPredicted RBP14.77□□□□□ -0.05
CLIP4-203ENST00000401617 VGLL2Q8N8G2 317 aa14.77□□□□□ -0.05
CLIP4-203ENST00000401617 INTS4Q96HW7 963 aaKnown RBP14.77□□□□□ -0.05
CLIP4-203ENST00000401617 RTL9Q8NET4 1388 aa14.76□□□□□ -0.05
CLIP4-203ENST00000401617 ABCC12Q96J65 1359 aa14.76□□□□□ -0.05
CLIP4-203ENST00000401617 LY75O60449 1722 aa14.76□□□□□ -0.05
CLIP4-203ENST00000401617 NTSR2O95665 410 aa14.76□□□□□ -0.05
CLIP4-203ENST00000401617 DEKP35659 375 aaKnown RBP14.76□□□□□ -0.05
CLIP4-203ENST00000401617 TSGA10IPQ3SY00 556 aa14.76□□□□□ -0.05
CLIP4-203ENST00000401617 CREB3L3Q68CJ9 461 aa14.76□□□□□ -0.05
CLIP4-203ENST00000401617 PRPF40BQ6NWY9 871 aaKnown RBP14.76□□□□□ -0.05
CLIP4-203ENST00000401617 LDHAL6AQ6ZMR3 332 aa14.76□□□□□ -0.05
CLIP4-203ENST00000401617 PTF1AQ7RTS3 328 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms