RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 C8orf34Q49A92 452 aa14.46□□□□□ -0.09
SKA3-203ENST00000400018 EAF2Q96CJ1 260 aaPredicted RBP14.46□□□□□ -0.09
SKA3-203ENST00000400018 IBTKQ9P2D0 1353 aaPredicted RBP14.46□□□□□ -0.1
SKA3-203ENST00000400018 DDR1Q08345 913 aa14.45□□□□□ -0.1
SKA3-203ENST00000400018 RC3H1Q5TC82 1133 aaKnown RBP14.45□□□□□ -0.1
SKA3-203ENST00000400018 AAMPQ13685 434 aa14.45□□□□□ -0.1
SKA3-203ENST00000400018 AACSQ86V21 672 aa14.45□□□□□ -0.1
SKA3-203ENST00000400018 ZBTB47Q9UFB7 747 aaPredicted RBP14.45□□□□□ -0.1
SKA3-203ENST00000400018 CARMIL3Q8ND23 1372 aa14.45□□□□□ -0.1
SKA3-203ENST00000400018 PLSCR1O15162 318 aa14.44□□□□□ -0.1
SKA3-203ENST00000400018 CTSWP56202 376 aa14.44□□□□□ -0.1
SKA3-203ENST00000400018 G3BP1Q13283 466 aaKnown RBP eCLIP14.44□□□□□ -0.1
SKA3-203ENST00000400018 SH3TC1Q8TE82 1336 aa14.44□□□□□ -0.1
SKA3-203ENST00000400018 N4BP2Q86UW6 1770 aaPredicted RBP14.44□□□□□ -0.1
SKA3-203ENST00000400018 RABL6Q3YEC7 729 aaPredicted RBP14.44□□□□□ -0.1
SKA3-203ENST00000400018 SLFNL1Q499Z3 407 aa14.44□□□□□ -0.1
SKA3-203ENST00000400018 TAF7LQ5H9L4 462 aa14.44□□□□□ -0.1
SKA3-203ENST00000400018 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
SKA3-203ENST00000400018 NEUROD6Q96NK8 337 aa14.44□□□□□ -0.1
SKA3-203ENST00000400018 RTN4Q9NQC3 1192 aaKnown RBP14.44□□□□□ -0.1
SKA3-203ENST00000400018 PNPLA7Q6ZV29 1317 aa14.44□□□□□ -0.1
SKA3-203ENST00000400018 CCDC57Q2TAC2 916 aa14.43□□□□□ -0.1
SKA3-203ENST00000400018 SLC27A3Q5K4L6 730 aa14.43□□□□□ -0.1
SKA3-203ENST00000400018 OLFM4Q6UX06 510 aa14.43□□□□□ -0.1
SKA3-203ENST00000400018 ATG9AQ7Z3C6 839 aa14.43□□□□□ -0.1
SKA3-203ENST00000400018 PSDA5PKW4 1024 aaPredicted RBP14.43□□□□□ -0.1
SKA3-203ENST00000400018 TRIM28Q13263 835 aaKnown RBP14.43□□□□□ -0.1
SKA3-203ENST00000400018 SF3B2Q13435 895 aaKnown RBP14.43□□□□□ -0.1
SKA3-203ENST00000400018 MTX1Q13505 466 aa14.43□□□□□ -0.1
SKA3-203ENST00000400018 HSP90AB3PQ58FF7 597 aa14.43□□□□□ -0.1
SKA3-203ENST00000400018 CELF1Q92879 486 aaKnown RBP14.43□□□□□ -0.1
SKA3-203ENST00000400018 C4AP0C0L4 1744 aa14.42□□□□□ -0.1
SKA3-203ENST00000400018 ADORA1P30542 326 aa14.42□□□□□ -0.1
SKA3-203ENST00000400018 RILPL2Q969X0 211 aa14.42□□□□□ -0.1
SKA3-203ENST00000400018 ZNF652Q9Y2D9 606 aa14.42□□□□□ -0.1
SKA3-203ENST00000400018 PDE1AP54750 535 aa14.42□□□□□ -0.1
SKA3-203ENST00000400018 IFIT5Q13325 482 aaKnown RBP14.42□□□□□ -0.1
SKA3-203ENST00000400018 LDHAL6AQ6ZMR3 332 aa14.42□□□□□ -0.1
SKA3-203ENST00000400018 GPR101Q96P66 508 aaPredicted RBP14.42□□□□□ -0.1
SKA3-203ENST00000400018 DBNDD2Q9BQY9 259 aa14.42□□□□□ -0.1
SKA3-203ENST00000400018 TNS1Q9HBL0 1735 aaKnown RBP14.41□□□□□ -0.1
SKA3-203ENST00000400018 UBR3Q6ZT12 1888 aa14.41□□□□□ -0.1
SKA3-203ENST00000400018 PDE8AO60658 829 aa14.41□□□□□ -0.1
SKA3-203ENST00000400018 IL27Q8NEV9 243 aa14.41□□□□□ -0.1
SKA3-203ENST00000400018 ZNF219Q9P2Y4 722 aaPredicted RBP14.41□□□□□ -0.1
SKA3-203ENST00000400018 TRIM6-TRIM34B2RNG4 842 aa14.41□□□□□ -0.1
SKA3-203ENST00000400018 PI16Q6UXB8 463 aa14.41□□□□□ -0.1
SKA3-203ENST00000400018 BOLA2Q9H3K6 86 aa14.41□□□□□ -0.1
SKA3-203ENST00000400018 IQSEC3Q9UPP2 1182 aaPredicted RBP14.41□□□□□ -0.1
SKA3-203ENST00000400018 ZBTB7AO95365 584 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 SERPINB2P05120 415 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 NBR1Q14596 966 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 ILDR2Q71H61 639 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 MMP10P09238 476 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 MX1P20591 662 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 PRR5LQ6MZQ0 368 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 KIF1BPQ96EK5 621 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 BACH2Q9BYV9 841 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 SNRKQ9NRH2 765 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 CNNM1Q9NRU3 951 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 RREB1Q92766 1687 aa14.4□□□□□ -0.1
SKA3-203ENST00000400018 CSF1RP07333 972 aa14.39□□□□□ -0.11
SKA3-203ENST00000400018 SLC15A2Q16348 729 aa14.39□□□□□ -0.11
SKA3-203ENST00000400018 DBNLQ9UJU6 430 aaKnown RBP14.39□□□□□ -0.11
SKA3-203ENST00000400018 SDSP20132 328 aa14.39□□□□□ -0.11
SKA3-203ENST00000400018 MFAP1P55081 439 aaKnown RBP14.39□□□□□ -0.11
SKA3-203ENST00000400018 IL25Q9H293 177 aa14.39□□□□□ -0.11
SKA3-203ENST00000400018 NOP58Q9Y2X3 529 aaKnown RBP14.39□□□□□ -0.11
SKA3-203ENST00000400018 ANKRD36CQ5JPF3 1778 aa14.38□□□□□ -0.11
SKA3-203ENST00000400018 CLEC4GQ6UXB4 293 aa14.38□□□□□ -0.11
SKA3-203ENST00000400018 COPRSQ9NQ92 184 aa14.38□□□□□ -0.11
SKA3-203ENST00000400018 JAG2Q9Y219 1238 aa14.38□□□□□ -0.11
SKA3-203ENST00000400018 ATF5Q9Y2D1 282 aaPredicted RBP14.38□□□□□ -0.11
SKA3-203ENST00000400018 TUBGCP6Q96RT7 1819 aa14.38□□□□□ -0.11
SKA3-203ENST00000400018 IFIT2P09913 472 aaKnown RBP14.38□□□□□ -0.11
SKA3-203ENST00000400018 BAG6P46379 1132 aa14.38□□□□□ -0.11
SKA3-203ENST00000400018 CNBD1Q8NA66 436 aa14.38□□□□□ -0.11
SKA3-203ENST00000400018 EYA2O00167 538 aa14.37□□□□□ -0.11
SKA3-203ENST00000400018 SSFA2P28290 1259 aa14.37□□□□□ -0.11
SKA3-203ENST00000400018 METTL24Q5JXM2 366 aa14.37□□□□□ -0.11
SKA3-203ENST00000400018 CLASRPQ8N2M8 674 aaKnown RBP14.37□□□□□ -0.11
SKA3-203ENST00000400018 ANKRD18BA2A2Z9 1011 aa14.37□□□□□ -0.11
SKA3-203ENST00000400018 POLRMTO00411 1230 aaKnown RBP14.37□□□□□ -0.11
SKA3-203ENST00000400018 KLRK1P26718 216 aa14.37□□□□□ -0.11
SKA3-203ENST00000400018 R3HDM1Q15032 1099 aaKnown RBP14.37□□□□□ -0.11
SKA3-203ENST00000400018 PARP10Q53GL7 1025 aa14.37□□□□□ -0.11
SKA3-203ENST00000400018 TNNI3KQ59H18 835 aa14.37□□□□□ -0.11
SKA3-203ENST00000400018 TTC22Q5TAA0 569 aa14.37□□□□□ -0.11
SKA3-203ENST00000400018 FPGT-TNNI3KV9GXZ4 949 aa14.37□□□□□ -0.11
SKA3-203ENST00000400018 SALL3Q9BXA9 1300 aa14.37□□□□□ -0.11
SKA3-203ENST00000400018 TPTE2Q6XPS3 522 aa14.36□□□□□ -0.11
SKA3-203ENST00000400018 SCARF1Q14162 830 aa14.36□□□□□ -0.11
SKA3-203ENST00000400018 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
SKA3-203ENST00000400018 PI4K2BQ8TCG2 481 aa14.36□□□□□ -0.11
SKA3-203ENST00000400018 DNAJC2Q99543 621 aaKnown RBP14.36□□□□□ -0.11
SKA3-203ENST00000400018 PPP1R1BQ9UD71 204 aaPredicted RBP14.36□□□□□ -0.11
SKA3-203ENST00000400018 BCORQ6W2J9 1755 aa14.36□□□□□ -0.11
SKA3-203ENST00000400018 A0A1B0GUL7 405 aa14.35□□□□□ -0.11
SKA3-203ENST00000400018 TM4SF1P30408 202 aa14.35□□□□□ -0.11
SKA3-203ENST00000400018 CDHR2Q9BYE9 1310 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms