RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ZSWIM4Q9H7M6 989 aa14.03□□□□□ -0.16
CACNA1C-219ENST00000399649 SH3BP5O60239 455 aa14.03□□□□□ -0.16
CACNA1C-219ENST00000399649 ORC3Q9UBD5 711 aaPredicted RBP14.03□□□□□ -0.16
CACNA1C-219ENST00000399649 ADAMTS2O95450 1211 aa14.03□□□□□ -0.16
CACNA1C-219ENST00000399649 ST5P78524 1137 aa14.03□□□□□ -0.16
CACNA1C-219ENST00000399649 TFIP11Q9UBB9 837 aaKnown RBP14.03□□□□□ -0.16
CACNA1C-219ENST00000399649 MICU3Q86XE3 530 aa14.02□□□□□ -0.16
CACNA1C-219ENST00000399649 LARP6Q9BRS8 491 aaKnown RBP14.02□□□□□ -0.16
CACNA1C-219ENST00000399649 HECW1Q76N89 1606 aa14.02□□□□□ -0.16
CACNA1C-219ENST00000399649 RBM25P49756 843 aaKnown RBP14.02□□□□□ -0.16
CACNA1C-219ENST00000399649 LMBR1Q8WVP7 490 aa14.02□□□□□ -0.16
CACNA1C-219ENST00000399649 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.16
CACNA1C-219ENST00000399649 NEK1Q96PY6 1258 aa14.02□□□□□ -0.16
CACNA1C-219ENST00000399649 SPAG5Q96R06 1193 aa14.02□□□□□ -0.16
CACNA1C-219ENST00000399649 SELENOSQ9BQE4 189 aa14.02□□□□□ -0.16
CACNA1C-219ENST00000399649 MCM5P33992 734 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 GJC1P36383 396 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 UBASH3AP57075 661 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 SNX16P57768 344 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 CTAGE15A4D2H0 777 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 CTAGE8P0CG41 777 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 TSPY3P0CV98 308 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 TSPY8P0CW00 308 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 CTAGE6Q86UF2 777 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 CTAGE4Q8IX94 777 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 IMPG2Q9BZV3 1241 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 HMG20BQ9P0W2 317 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 ZBTB16Q05516 673 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 USHBP1Q8N6Y0 703 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 TNPO1Q92973 898 aaKnown RBP14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 PTPRCP08575 1304 aa14.02□□□□□ -0.17
CACNA1C-219ENST00000399649 EEF2P13639 858 aaKnown RBP14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 CCDC50Q8IVM0 306 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 IVLP07476 585 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 TRAF1Q13077 416 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 PPP1R42Q7Z4L9 355 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 ZSCAN16Q9H4T2 348 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 EHBP1L1Q8N3D4 1523 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 SYKP43405 635 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 UBE2HP62256 183 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 KIAA1524Q8TCG1 905 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 NBPF7P0C2Y1 421 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 GPTP24298 496 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 CWC25Q9NXE8 425 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 ABCC11Q96J66 1382 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 FAM13AO94988 1023 aa14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 NCBP1Q09161 790 aaKnown RBP14.01□□□□□ -0.17
CACNA1C-219ENST00000399649 CAVIN2O95810 425 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 BMP15O95972 392 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 CFAP58Q5T655 872 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 KRT23Q9C075 422 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 MAP3K2Q9Y2U5 619 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 DAPK1P53355 1430 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 CCDC14Q49A88 953 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 NKTRP30414 1462 aaKnown RBP14□□□□□ -0.17
CACNA1C-219ENST00000399649 ZNF165P49910 485 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 TERF1P54274 439 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 WTAPQ15007 396 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 ZNF622Q969S3 477 aaKnown RBP eCLIP14□□□□□ -0.17
CACNA1C-219ENST00000399649 AFMP43652 599 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 HAND2P61296 217 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 IFIT1BQ5T764 474 aaKnown RBP14□□□□□ -0.17
CACNA1C-219ENST00000399649 TACC1O75410 805 aa14□□□□□ -0.17
CACNA1C-219ENST00000399649 MKRN1Q9UHC7 482 aaKnown RBP14□□□□□ -0.17
CACNA1C-219ENST00000399649 ATP2A2P16615 1042 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 RAB11FIP4Q86YS3 637 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 THUMPD2Q9BTF0 503 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 TXNDC16Q9P2K2 825 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 DBF4Q9UBU7 674 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 DPH6Q7L8W6 267 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 SMC1BQ8NDV3 1235 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 TEX13AQ9BXU3 409 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 NCAPD3P42695 1498 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 F6X3S4 739 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 UQCRFS1P1P0C7P4 283 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 SEPT6Q14141 434 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 HEATR3Q7Z4Q2 680 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 GTF2A1P52655 376 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 CCDC121Q6ZUS5 278 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 MSANTD4Q8NCY6 345 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 GDPD2Q9HCC8 539 aa13.99□□□□□ -0.17
CACNA1C-219ENST00000399649 GMNNO75496 209 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 CFAP157Q5JU67 520 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 ECHDC1Q9NTX5 307 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 HDAC9Q9UKV0 1011 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 DYNC1I1O14576 645 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 ATRIPQ8WXE1 791 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 CC2D2AQ9P2K1 1620 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 LDHAL6AQ6ZMR3 332 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 NGLY1Q96IV0 654 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 PRIMPOLQ96LW4 560 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 FAM169AQ9Y6X4 670 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 GAS8O95995 478 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 RPUSD2Q8IZ73 545 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 RSPH14Q9UHP6 348 aa13.98□□□□□ -0.17
CACNA1C-219ENST00000399649 CTAGE9A4FU28 777 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 ALDH3A1P30838 453 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 ZGPATQ8N5A5 531 aaKnown RBP13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 SRRTQ9BXP5 876 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms