RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 GOLGA8AA7E2F4 631 aa12.58□□□□□ -0.4
CACNA1C-210ENST00000399606 GOLGA8BA8MQT2 603 aa12.58□□□□□ -0.4
CACNA1C-210ENST00000399606 FGFR1OPO95684 399 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-210ENST00000399606 GNL1P36915 607 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-210ENST00000399606 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-210ENST00000399606 H7C1D1 291 aa12.58□□□□□ -0.4
CACNA1C-210ENST00000399606 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 ABCA10Q8WWZ4 1543 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 PSMC4P43686 418 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 TAF7Q15545 349 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 CFAP58Q5T655 872 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 TRIM6Q9C030 488 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 ACTN2P35609 894 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 TMCO3Q6UWJ1 677 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 RNF34Q969K3 372 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 JAG2Q9Y219 1238 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 IDEP14735 1019 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 RAB3GAP1Q15042 981 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 SPA17Q15506 151 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 CCDC40Q4G0X9 1142 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 DUSP27Q5VZP5 1158 aa12.57□□□□□ -0.4
CACNA1C-210ENST00000399606 GCOM1H8Y6P7 765 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 MYZAPP0CAP1 466 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 TRAF1Q13077 416 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 KRT32Q14532 448 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 CCDC8Q9H0W5 538 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 GBP3Q9H0R5 595 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 PKD2L1Q9P0L9 805 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 SMTNL1A8MU46 457 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 NOP56O00567 594 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 MVPQ14764 893 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 FBXO31Q5XUX0 539 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 CRACR2AQ9BSW2 395 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 NOP9Q86U38 636 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 IMPG2Q9BZV3 1241 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 SNRKQ9NRH2 765 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 WDR7Q9Y4E6 1490 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 CASQ1P31415 396 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
CACNA1C-210ENST00000399606 ZMYM3Q14202 1370 aa12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 ZYXQ15942 572 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 TDRD12Q587J7 1177 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 CYP7A1P22680 504 aa12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 TCOF1Q13428 1488 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 OTUD7BQ6GQQ9 843 aa12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 NAP1L3Q99457 506 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 ERCC3P19447 782 aa12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 GABPAQ06546 454 aa12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 MICALCLQ6ZW33 695 aa12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 ERMNQ8TAM6 284 aa12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 PHAXQ9H814 394 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 DCPSQ96C86 337 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 ADAMTS8Q9UP79 889 aa12.55□□□□□ -0.4
CACNA1C-210ENST00000399606 PPP2R1AP30153 589 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 SEPT10Q9P0V9 454 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 GUCY1B3Q02153 619 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 MAP9Q49MG5 647 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 PRPF31Q8WWY3 499 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 TCP11L1Q9NUJ3 509 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 BTG4Q9NY30 223 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 SNX16P57768 344 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 TTC30AQ86WT1 665 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 ODF2LQ9ULJ1 636 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 TPD52P55327 224 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 IFFO1Q0D2I5 559 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 HEATR3Q7Z4Q2 680 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 CSADQ9Y600 493 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 HARSP12081 509 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-210ENST00000399606 RALGAPBQ86X10 1494 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 MCM3P25205 808 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 GJC1P36383 396 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 TMEM67Q5HYA8 995 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 CNBD1Q8NA66 436 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 PRPF4BQ13523 1007 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 NAA25Q14CX7 972 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 MFSD6Q6ZSS7 791 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 MAP3K2Q9Y2U5 619 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 FAM135AQ9P2D6 1515 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 KRT85P78386 507 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 SLFN5Q08AF3 891 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 RNF169Q8NCN4 708 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 HOOK2Q96ED9 719 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms