RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 ZNF652Q9Y2D9 606 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 MCM6Q14566 821 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 MFSD6Q6ZSS7 791 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 PPFIA3O75145 1194 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 OPA1O60313 960 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 AKR1B10O60218 316 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 TCERG1LQ5VWI1 586 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 EHMT1Q9H9B1 1298 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 RBM25P49756 843 aaKnown RBP12.87□□□□□ -0.35
LAMA3-203ENST00000399516 DNAJC25Q9H1X3 360 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 TMOD2Q9NZR1 351 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 HAND2P61296 217 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 TYRO3Q06418 890 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 DDX12PQ92771 950 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
LAMA3-203ENST00000399516 CAPN2P17655 700 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 IKBKGQ9Y6K9 419 aa12.87□□□□□ -0.35
LAMA3-203ENST00000399516 ARHGAP45Q92619 1136 aa12.86□□□□□ -0.35
LAMA3-203ENST00000399516 ABCA10Q8WWZ4 1543 aa12.86□□□□□ -0.35
LAMA3-203ENST00000399516 STMN4Q9H169 189 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-203ENST00000399516 CCDC155Q8N6L0 562 aa12.86□□□□□ -0.35
LAMA3-203ENST00000399516 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.86□□□□□ -0.35
LAMA3-203ENST00000399516 V9GYY5 206 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-203ENST00000399516 KIAA0586Q9BVV6 1533 aa12.86□□□□□ -0.35
LAMA3-203ENST00000399516 PIP4K2BP78356 416 aa12.86□□□□□ -0.35
LAMA3-203ENST00000399516 IDEP14735 1019 aa12.86□□□□□ -0.35
LAMA3-203ENST00000399516 KIAA0753Q2KHM9 967 aa12.86□□□□□ -0.35
LAMA3-203ENST00000399516 NECAB1Q8N987 351 aa12.86□□□□□ -0.35
LAMA3-203ENST00000399516 PPM1EQ8WY54 764 aa12.86□□□□□ -0.35
LAMA3-203ENST00000399516 NOS1P29475 1434 aa12.86□□□□□ -0.35
LAMA3-203ENST00000399516 CYLC1P35663 651 aaPredicted RBP12.86□□□□□ -0.35
LAMA3-203ENST00000399516 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 CCDC121Q6ZUS5 278 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 ESYT1Q9BSJ8 1104 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 SCLT1Q96NL6 688 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 LRRC27Q9C0I9 530 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 A0A1W2PRG0 241 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 KIF4AO95239 1232 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 TTC12Q9H892 705 aaPredicted RBP12.85□□□□□ -0.35
LAMA3-203ENST00000399516 BMP15O95972 392 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 SMC5Q8IY18 1101 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
LAMA3-203ENST00000399516 UBA7P41226 1012 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 DNM1Q05193 864 aaKnown RBP12.85□□□□□ -0.35
LAMA3-203ENST00000399516 DRC1Q96MC2 740 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 CCDC172P0C7W6 258 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 STAT6P42226 847 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 STXBP4Q6ZWJ1 553 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 BRF1Q92994 677 aa12.85□□□□□ -0.35
LAMA3-203ENST00000399516 THOC2Q8NI27 1593 aaKnown RBP12.85□□□□□ -0.35
LAMA3-203ENST00000399516 SPAG1Q07617 926 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 ADGRL1O94910 1474 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 PDE4BQ07343 736 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 HSP90AA4PQ58FG1 418 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 POGZQ7Z3K3 1410 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 ZNF444Q8N0Y2 327 aaPredicted RBP12.84□□□□□ -0.35
LAMA3-203ENST00000399516 TBC1D5Q92609 795 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 DACT1Q9NYF0 836 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 VPS18Q9P253 973 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 TBCAO75347 108 aaKnown RBP12.84□□□□□ -0.35
LAMA3-203ENST00000399516 PDE1AP54750 535 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
LAMA3-203ENST00000399516 AFMP43652 599 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 OGFRQ9NZT2 677 aa12.84□□□□□ -0.35
LAMA3-203ENST00000399516 TTC21AQ8NDW8 1320 aa12.83□□□□□ -0.35
LAMA3-203ENST00000399516 KLF18A0A0U1RQI7 1052 aa12.83□□□□□ -0.35
LAMA3-203ENST00000399516 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
LAMA3-203ENST00000399516 PPP1R14CQ8TAE6 165 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 TRMT112Q9UI30 125 aaKnown RBP12.83□□□□□ -0.36
LAMA3-203ENST00000399516 KAT14Q9H8E8 782 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 PTGS1P23219 599 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 TUBB4BP68371 445 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 HOMER2Q9NSB8 354 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 PARD3Q8TEW0 1356 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 NBPF11Q86T75 865 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 TACC1O75410 805 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 CFAP43Q8NDM7 1665 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 FAM83GA6ND36 823 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 UBE3BQ7Z3V4 1068 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 WAPLQ7Z5K2 1190 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 SLF2Q8IX21 1173 aa12.83□□□□□ -0.36
LAMA3-203ENST00000399516 CCDC129Q6ZRS4 1044 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 PLVAPQ9BX97 442 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 PCDHB15Q9Y5E8 787 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 SYCP3Q8IZU3 236 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 RHPN1Q8TCX5 695 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 FBF1Q8TES7 1133 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 TTC14Q96N46 770 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 ERMNQ8TAM6 284 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 PRC1O43663 620 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 ATRIPQ8WXE1 791 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 SELENOOQ9BVL4 669 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 Q6ZUG5 572 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 KRT23Q9C075 422 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 CWC25Q9NXE8 425 aaPredicted RBP12.82□□□□□ -0.36
LAMA3-203ENST00000399516 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms