RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 THUMPD2Q9BTF0 503 aaKnown RBP7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 LRRC27Q9C0I9 530 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 ZHX3Q9H4I2 956 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 ENAMQ9NRM1 1142 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 NRXN1Q9ULB1 1477 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 ELL2O00472 640 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 RLBP1P12271 317 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 PDE3BQ13370 1112 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 SF3B2Q13435 895 aaKnown RBP7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 NFE2L2Q16236 605 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 ZRANB1Q9UGI0 708 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 LZTS1Q9Y250 596 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 TERF1P54274 439 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 LONRF1Q17RB8 773 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 CEP120Q8N960 986 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 MRFAP1L1Q96HT8 127 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 ARNT2Q9HBZ2 717 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 ANAPC4Q9UJX5 808 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 ZFYVE9O95405 1425 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 SLIT1O75093 1534 aa7.58□□□□□ -1.2
TRAPPC13-202ENST00000399438 BICDL2A1A5D9 508 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 H3BRB1 525 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 K7ELQ4 463 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 PSEN1P49768 467 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 SERINC3Q13530 473 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 KANK3Q6NY19 840 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 RIC3Q7Z5B4 369 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 FERMT3Q86UX7 667 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 AKT1S1Q96B36 256 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 TUT1Q9H6E5 874 aaKnown RBP7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 RNF19AQ9NV58 838 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 HDAC5Q9UQL6 1122 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 KAT6BQ8WYB5 2073 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 ARHGAP23Q9P227 1491 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 FGRP09769 529 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 ATP2B4P23634 1241 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 GNL2Q13823 731 aaKnown RBP7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 WDR75Q8IWA0 830 aaKnown RBP7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 PRPF38AQ8NAV1 312 aaKnown RBP7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 PPM1EQ8WY54 764 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 C12orf49Q9H741 205 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 HMX1Q9NP08 348 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 DCTN4Q9UJW0 460 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 EIF3AQ14152 1382 aaKnown RBP7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 BLMP54132 1417 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 HMOX1P09601 288 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 ZNF211Q13398 564 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 NLRP7Q8WX94 980 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 CEP89Q96ST8 783 aa7.57□□□□□ -1.2
TRAPPC13-202ENST00000399438 SETD1BQ9UPS6 1966 aaKnown RBP7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 BPNT1O95861 308 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 ZRSR2Q15696 482 aaKnown RBP7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 TMEM95Q3KNT9 176 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 C10orf62Q5T681 223 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 EGFL6Q8IUX8 553 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 RIMS2Q9UQ26 1411 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 A6NJY4 79 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 KIAA1210Q9ULL0 1709 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 TMEM2Q9UHN6 1383 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 SEC24BO95487 1268 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 TUSC1Q2TAM9 212 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 CRTC2Q53ET0 693 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 EGFL7Q9UHF1 273 aa7.56□□□□□ -1.2
TRAPPC13-202ENST00000399438 ASXL1Q8IXJ9 1541 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 TBX3O15119 743 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 CT47B1P0C2W7 299 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 RSPH1Q8WYR4 309 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 C14orf93Q9H972 538 aaKnown RBP7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 ANO2Q9NQ90 1003 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 CABP1Q9NZU7 370 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 PIK3C2GO75747 1445 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 ZNF521Q96K83 1311 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 CBFA2T2O43439 604 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 RAPGEF1Q13905 1077 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 AS3MTQ9HBK9 375 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 AKAP2Q9Y2D5 859 aa7.55□□□□□ -1.2
TRAPPC13-202ENST00000399438 NEXNQ0ZGT2 675 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 NBPF9Q3BBW0 867 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 CC2D1AQ6P1N0 951 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 CHPFQ8IZ52 775 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 RGL4Q8IZJ4 473 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 NRXN3Q9Y4C0 1643 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 ICMTO60725 284 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 ARHGAP4P98171 946 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 PGBD3Q8N328 593 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 LAMC1P11047 1609 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 SETBP1Q9Y6X0 1596 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 PPP1R12AO14974 1030 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 HIP1RO75146 1068 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 CAND2O75155 1236 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 NOS2P35228 1153 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 NFE2Q16621 373 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 TBC1D10BQ4KMP7 808 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 INO80DQ53TQ3 878 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 CCDC93Q567U6 631 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 KANSL2Q9H9L4 492 aa7.54□□□□□ -1.2
TRAPPC13-202ENST00000399438 LMTK3Q96Q04 1460 aa7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 SRGNP10124 158 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms