RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 ST3GAL1Q11201 340 aa27.56■■■□□ 2
RABGGTA-202ENST00000399409 TAF5LO75529 589 aa27.55■■■□□ 2
RABGGTA-202ENST00000399409 PIP4K2AP48426 406 aaPredicted RBP27.55■■■□□ 2
RABGGTA-202ENST00000399409 PCDH11XQ9BZA7 1347 aa27.55■■■□□ 2
RABGGTA-202ENST00000399409 PCDH11YQ9BZA8 1340 aa27.55■■■□□ 2
RABGGTA-202ENST00000399409 PDCP20941 246 aa27.55■■■□□ 2
RABGGTA-202ENST00000399409 NOL7Q9UMY1 257 aaKnown RBP27.55■■■□□ 2
RABGGTA-202ENST00000399409 ATP5J2-PTCD1G3V325 749 aa27.54■■■□□ 2
RABGGTA-202ENST00000399409 PTCD1O75127 700 aaKnown RBP27.54■■■□□ 2
RABGGTA-202ENST00000399409 UVSSAQ2YD98 709 aa27.54■■■□□ 2
RABGGTA-202ENST00000399409 H7C1W4 665 aa27.53■■■□□ 2
RABGGTA-202ENST00000399409 TICAM2Q86XR7 235 aa27.53■■■□□ 2
RABGGTA-202ENST00000399409 JARID2Q92833 1246 aaPredicted RBP27.53■■■□□ 2
RABGGTA-202ENST00000399409 ERVV-2B6SEH9 535 aa27.53■■■□□ 2
RABGGTA-202ENST00000399409 ZNF589Q86UQ0 364 aaPredicted RBP27.53■■■□□ 2
RABGGTA-202ENST00000399409 HAUS7Q99871 368 aa27.53■■■□□ 2
RABGGTA-202ENST00000399409 CCDC39Q9UFE4 941 aa27.52■■■□□ 2
RABGGTA-202ENST00000399409 MCM5P33992 734 aa27.52■■■□□ 2
RABGGTA-202ENST00000399409 ZCRB1Q8TBF4 217 aaKnown RBP27.52■■■□□ 2
RABGGTA-202ENST00000399409 WDR17Q8IZU2 1322 aa27.51■■■□□ 2
RABGGTA-202ENST00000399409 NECAB1Q8N987 351 aa27.51■■□□□ 1.99
RABGGTA-202ENST00000399409 DDX54Q8TDD1 881 aaKnown RBP27.51■■□□□ 1.99
RABGGTA-202ENST00000399409 U3KPZ7 1027 aaPredicted RBP27.51■■□□□ 1.99
RABGGTA-202ENST00000399409 LMBR1LQ6UX01 489 aa27.51■■□□□ 1.99
RABGGTA-202ENST00000399409 RNF214Q8ND24 703 aa27.51■■□□□ 1.99
RABGGTA-202ENST00000399409 GPR108Q9NPR9 543 aa27.51■■□□□ 1.99
RABGGTA-202ENST00000399409 FIBPO43427 364 aa27.5■■□□□ 1.99
RABGGTA-202ENST00000399409 LARP1BQ659C4 914 aaKnown RBP27.5■■□□□ 1.99
RABGGTA-202ENST00000399409 NBPF26B4DH59 902 aa27.5■■□□□ 1.99
RABGGTA-202ENST00000399409 FOXO4P98177 505 aa27.5■■□□□ 1.99
RABGGTA-202ENST00000399409 NBPF14Q5TI25 921 aa27.5■■□□□ 1.99
RABGGTA-202ENST00000399409 NBPF10Q6P3W6 841 aaKnown RBP27.5■■□□□ 1.99
RABGGTA-202ENST00000399409 NBPF15Q8N660 670 aa27.5■■□□□ 1.99
RABGGTA-202ENST00000399409 DBNDD2Q9BQY9 259 aa27.5■■□□□ 1.99
RABGGTA-202ENST00000399409 CWC25Q9NXE8 425 aaPredicted RBP27.5■■□□□ 1.99
RABGGTA-202ENST00000399409 VPS37CA5D8V6 355 aaPredicted RBP27.49■■□□□ 1.99
RABGGTA-202ENST00000399409 EDC3Q96F86 508 aaKnown RBP27.49■■□□□ 1.99
RABGGTA-202ENST00000399409 UBR2Q8IWV8 1755 aa27.49■■□□□ 1.99
RABGGTA-202ENST00000399409 DNM1Q05193 864 aaKnown RBP27.48■■□□□ 1.99
RABGGTA-202ENST00000399409 TOB2Q14106 344 aaPredicted RBP27.48■■□□□ 1.99
RABGGTA-202ENST00000399409 MCMDC2Q4G0Z9 681 aa27.48■■□□□ 1.99
RABGGTA-202ENST00000399409 NKX1-1Q15270 411 aaPredicted RBP27.47■■□□□ 1.99
RABGGTA-202ENST00000399409 NUP188Q5SRE5 1749 aa27.47■■□□□ 1.99
RABGGTA-202ENST00000399409 ZNF500O60304 480 aaPredicted RBP27.47■■□□□ 1.99
RABGGTA-202ENST00000399409 DNAJC2Q99543 621 aaKnown RBP27.47■■□□□ 1.99
RABGGTA-202ENST00000399409 ZKSCAN5Q9Y2L8 839 aa27.46■■□□□ 1.99
RABGGTA-202ENST00000399409 ZNF609O15014 1411 aa27.46■■□□□ 1.99
RABGGTA-202ENST00000399409 KBTBD3Q8NAB2 608 aa27.46■■□□□ 1.99
RABGGTA-202ENST00000399409 PRDM11Q9NQV5 511 aa27.46■■□□□ 1.99
RABGGTA-202ENST00000399409 TOM1L2Q6ZVM7 507 aa27.45■■□□□ 1.98
RABGGTA-202ENST00000399409 CCDC191Q8NCU4 936 aa27.45■■□□□ 1.98
RABGGTA-202ENST00000399409 NEK1Q96PY6 1258 aa27.45■■□□□ 1.98
RABGGTA-202ENST00000399409 SH3TC1Q8TE82 1336 aa27.45■■□□□ 1.98
RABGGTA-202ENST00000399409 PAPPAQ13219 1627 aa27.45■■□□□ 1.98
RABGGTA-202ENST00000399409 OFD1O75665 1012 aa27.44■■□□□ 1.98
RABGGTA-202ENST00000399409 IL15P40933 162 aaPredicted RBP27.44■■□□□ 1.98
RABGGTA-202ENST00000399409 TAF6LQ9Y6J9 622 aa27.44■■□□□ 1.98
RABGGTA-202ENST00000399409 PALLDQ8WX93 1383 aa27.44■■□□□ 1.98
RABGGTA-202ENST00000399409 KCPQ6ZWJ8 1503 aa27.44■■□□□ 1.98
RABGGTA-202ENST00000399409 KRT85P78386 507 aa27.44■■□□□ 1.98
RABGGTA-202ENST00000399409 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.44■■□□□ 1.98
RABGGTA-202ENST00000399409 BRINP3Q76B58 766 aa27.44■■□□□ 1.98
RABGGTA-202ENST00000399409 ATG9AQ7Z3C6 839 aa27.43■■□□□ 1.98
RABGGTA-202ENST00000399409 ATG3Q9NT62 314 aa27.43■■□□□ 1.98
RABGGTA-202ENST00000399409 CHMP3Q9Y3E7 222 aa27.43■■□□□ 1.98
RABGGTA-202ENST00000399409 ELP1O95163 1332 aa27.43■■□□□ 1.98
RABGGTA-202ENST00000399409 TTLL7Q6ZT98 887 aa27.43■■□□□ 1.98
RABGGTA-202ENST00000399409 HELLSQ9NRZ9 838 aa27.42■■□□□ 1.98
RABGGTA-202ENST00000399409 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.42■■□□□ 1.98
RABGGTA-202ENST00000399409 TJP1Q07157 1748 aa27.42■■□□□ 1.98
RABGGTA-202ENST00000399409 COL9A3Q14050 684 aaPredicted RBP27.41■■□□□ 1.98
RABGGTA-202ENST00000399409 TCEANC2Q96MN5 208 aa27.41■■□□□ 1.98
RABGGTA-202ENST00000399409 CIAO1O76071 339 aa27.41■■□□□ 1.98
RABGGTA-202ENST00000399409 CARD10Q9BWT7 1032 aa27.41■■□□□ 1.98
RABGGTA-202ENST00000399409 COL5A2P05997 1499 aaPredicted RBP27.41■■□□□ 1.98
RABGGTA-202ENST00000399409 HMGB1P09429 215 aaKnown RBP27.4■■□□□ 1.98
RABGGTA-202ENST00000399409 IL2RBP14784 551 aa27.4■■□□□ 1.98
RABGGTA-202ENST00000399409 DDX46Q7L014 1031 aaKnown RBP27.4■■□□□ 1.98
RABGGTA-202ENST00000399409 CDC37L1Q7L3B6 337 aa27.4■■□□□ 1.98
RABGGTA-202ENST00000399409 TNS2Q63HR2 1409 aa27.4■■□□□ 1.98
RABGGTA-202ENST00000399409 GTF3C6Q969F1 213 aa27.39■■□□□ 1.98
RABGGTA-202ENST00000399409 PAG1Q9NWQ8 432 aa27.39■■□□□ 1.98
RABGGTA-202ENST00000399409 EYA2O00167 538 aa27.39■■□□□ 1.98
RABGGTA-202ENST00000399409 A1BGP04217 495 aa27.38■■□□□ 1.97
RABGGTA-202ENST00000399409 TPM2P07951 284 aa27.38■■□□□ 1.97
RABGGTA-202ENST00000399409 NEUROD6Q96NK8 337 aa27.38■■□□□ 1.97
RABGGTA-202ENST00000399409 SCAND2PQ9GZW5 306 aaPredicted RBP27.38■■□□□ 1.97
RABGGTA-202ENST00000399409 NDUFB9Q9Y6M9 179 aa27.38■■□□□ 1.97
RABGGTA-202ENST00000399409 XIRP1Q702N8 1843 aaKnown RBP27.38■■□□□ 1.97
RABGGTA-202ENST00000399409 SOS2Q07890 1332 aaPredicted RBP27.38■■□□□ 1.97
RABGGTA-202ENST00000399409 CCDC129Q6ZRS4 1044 aa27.38■■□□□ 1.97
RABGGTA-202ENST00000399409 FUCA2Q9BTY2 467 aa27.38■■□□□ 1.97
RABGGTA-202ENST00000399409 DSCC1Q9BVC3 393 aa27.38■■□□□ 1.97
RABGGTA-202ENST00000399409 CYP21A2P08686 494 aa27.37■■□□□ 1.97
RABGGTA-202ENST00000399409 SEC62Q99442 399 aaKnown RBP27.37■■□□□ 1.97
RABGGTA-202ENST00000399409 PTMAP06454 111 aaKnown RBP27.37■■□□□ 1.97
RABGGTA-202ENST00000399409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.37■■□□□ 1.97
RABGGTA-202ENST00000399409 SPEF2Q9C093 1822 aa27.36■■□□□ 1.97
RABGGTA-202ENST00000399409 TERF1P54274 439 aa27.36■■□□□ 1.97
RABGGTA-202ENST00000399409 Q6ZUG5 572 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms