RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 USP44Q9H0E7 712 aa22.28■■□□□ 1.16
CTNS-203ENST00000399306 SLX4Q8IY92 1834 aa22.28■■□□□ 1.16
CTNS-203ENST00000399306 GOLGB1Q14789 3259 aaKnown RBP22.28■■□□□ 1.16
CTNS-203ENST00000399306 BBOX1O75936 387 aa22.27■■□□□ 1.16
CTNS-203ENST00000399306 CSF1RP07333 972 aa22.27■■□□□ 1.16
CTNS-203ENST00000399306 GRIPAP1Q4V328 841 aa22.27■■□□□ 1.16
CTNS-203ENST00000399306 CC2D2BQ6DHV5 1058 aa22.27■■□□□ 1.16
CTNS-203ENST00000399306 PRPF40BQ6NWY9 871 aaKnown RBP22.27■■□□□ 1.16
CTNS-203ENST00000399306 DZIP1LQ8IYY4 767 aaKnown RBP22.27■■□□□ 1.16
CTNS-203ENST00000399306 GRAPQ13588 217 aa22.26■■□□□ 1.15
CTNS-203ENST00000399306 TTLL11Q8NHH1 800 aa22.26■■□□□ 1.15
CTNS-203ENST00000399306 GRAPLQ8TC17 118 aaPredicted RBP22.26■■□□□ 1.15
CTNS-203ENST00000399306 C7orf43Q8WVR3 580 aa22.26■■□□□ 1.15
CTNS-203ENST00000399306 CACNA1SQ13698 1873 aa22.26■■□□□ 1.15
CTNS-203ENST00000399306 FTSJ3Q8IY81 847 aaKnown RBP22.25■■□□□ 1.15
CTNS-203ENST00000399306 NBPF7P0C2Y1 421 aaPredicted RBP22.24■■□□□ 1.15
CTNS-203ENST00000399306 JARID2Q92833 1246 aaPredicted RBP22.24■■□□□ 1.15
CTNS-203ENST00000399306 GNAI3P08754 354 aa22.23■■□□□ 1.15
CTNS-203ENST00000399306 FOXO4P98177 505 aa22.23■■□□□ 1.15
CTNS-203ENST00000399306 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
CTNS-203ENST00000399306 PDE3AQ14432 1141 aa22.22■■□□□ 1.15
CTNS-203ENST00000399306 RABL6Q3YEC7 729 aaPredicted RBP22.22■■□□□ 1.15
CTNS-203ENST00000399306 CDC5LQ99459 802 aaKnown RBP22.22■■□□□ 1.15
CTNS-203ENST00000399306 FER1L6Q2WGJ9 1857 aa22.22■■□□□ 1.15
CTNS-203ENST00000399306 CHD4Q14839 1912 aa22.21■■□□□ 1.15
CTNS-203ENST00000399306 TMEM57Q8N5G2 664 aa22.21■■□□□ 1.15
CTNS-203ENST00000399306 CLUAP1Q96AJ1 413 aa22.21■■□□□ 1.15
CTNS-203ENST00000399306 ATP6V0A2Q9Y487 856 aa22.21■■□□□ 1.15
CTNS-203ENST00000399306 LTBP3Q9NS15 1303 aa22.21■■□□□ 1.15
CTNS-203ENST00000399306 PPEF1O14829 653 aaPredicted RBP22.2■■□□□ 1.14
CTNS-203ENST00000399306 UBTFL1P0CB47 393 aaPredicted RBP22.2■■□□□ 1.14
CTNS-203ENST00000399306 RPS8P62241 208 aaKnown RBP22.2■■□□□ 1.14
CTNS-203ENST00000399306 CCDC93Q567U6 631 aa22.2■■□□□ 1.14
CTNS-203ENST00000399306 SP8Q8IXZ3 490 aa22.2■■□□□ 1.14
CTNS-203ENST00000399306 RTKN2Q8IZC4 609 aa22.2■■□□□ 1.14
CTNS-203ENST00000399306 KAZALD1Q96I82 304 aa22.2■■□□□ 1.14
CTNS-203ENST00000399306 SUCLG2Q96I99 432 aa22.2■■□□□ 1.14
CTNS-203ENST00000399306 TMX4Q9H1E5 349 aaPredicted RBP22.2■■□□□ 1.14
CTNS-203ENST00000399306 TNNQ9UQP3 1299 aa22.2■■□□□ 1.14
CTNS-203ENST00000399306 C21orf2O43822 256 aa22.19■■□□□ 1.14
CTNS-203ENST00000399306 SNED1Q8TER0 1413 aa22.19■■□□□ 1.14
CTNS-203ENST00000399306 LRRC37AA6NMS7 1700 aa22.19■■□□□ 1.14
CTNS-203ENST00000399306 UTRNP46939 3433 aa22.19■■□□□ 1.14
CTNS-203ENST00000399306 TAF1P21675 1872 aa22.18■■□□□ 1.14
CTNS-203ENST00000399306 RLBP1P12271 317 aa22.18■■□□□ 1.14
CTNS-203ENST00000399306 LMBR1LQ6UX01 489 aa22.18■■□□□ 1.14
CTNS-203ENST00000399306 GREM2Q9H772 168 aa22.18■■□□□ 1.14
CTNS-203ENST00000399306 WWC3Q9ULE0 1092 aa22.18■■□□□ 1.14
CTNS-203ENST00000399306 EPHA10Q5JZY3 1008 aa22.17■■□□□ 1.14
CTNS-203ENST00000399306 ANKRD18AQ8IVF6 992 aa22.17■■□□□ 1.14
CTNS-203ENST00000399306 CELF1Q92879 486 aaKnown RBP22.17■■□□□ 1.14
CTNS-203ENST00000399306 CHMP4BQ9H444 224 aaKnown RBP22.17■■□□□ 1.14
CTNS-203ENST00000399306 ANKRD18BA2A2Z9 1011 aa22.16■■□□□ 1.14
CTNS-203ENST00000399306 ITGA6P23229 1130 aa22.16■■□□□ 1.14
CTNS-203ENST00000399306 IFIT5Q13325 482 aaKnown RBP22.16■■□□□ 1.14
CTNS-203ENST00000399306 ARHGAP27Q6ZUM4 889 aa22.16■■□□□ 1.14
CTNS-203ENST00000399306 PSMD1Q99460 953 aa22.16■■□□□ 1.14
CTNS-203ENST00000399306 MEIS3Q99687 375 aa22.16■■□□□ 1.14
CTNS-203ENST00000399306 BICC1Q9H694 974 aaKnown RBP22.16■■□□□ 1.14
CTNS-203ENST00000399306 SEC31BQ9NQW1 1179 aa22.16■■□□□ 1.14
CTNS-203ENST00000399306 CCDC57Q2TAC2 916 aa22.15■■□□□ 1.14
CTNS-203ENST00000399306 FAM161AQ3B820 660 aa22.15■■□□□ 1.14
CTNS-203ENST00000399306 ITPRIPQ8IWB1 547 aa22.15■■□□□ 1.14
CTNS-203ENST00000399306 ANKRD44Q8N8A2 993 aa22.15■■□□□ 1.14
CTNS-203ENST00000399306 BSDC1Q9NW68 430 aaPredicted RBP22.15■■□□□ 1.14
CTNS-203ENST00000399306 SBF1O95248 1867 aa22.15■■□□□ 1.14
CTNS-203ENST00000399306 ZBTB7BO15156 539 aaPredicted RBP22.14■■□□□ 1.13
CTNS-203ENST00000399306 IGHMBP2P38935 993 aaKnown RBP22.14■■□□□ 1.13
CTNS-203ENST00000399306 FKBP4Q02790 459 aaKnown RBP eCLIP22.14■■□□□ 1.13
CTNS-203ENST00000399306 MVPQ14764 893 aaKnown RBP22.14■■□□□ 1.13
CTNS-203ENST00000399306 VPS33BQ9H267 617 aa22.14■■□□□ 1.13
CTNS-203ENST00000399306 DDX19BQ9UMR2 479 aa22.14■■□□□ 1.13
CTNS-203ENST00000399306 NFKBIEO00221 500 aa22.13■■□□□ 1.13
CTNS-203ENST00000399306 GNAI2P04899 355 aa22.13■■□□□ 1.13
CTNS-203ENST00000399306 MTX1Q13505 466 aa22.13■■□□□ 1.13
CTNS-203ENST00000399306 TAOK3Q9H2K8 898 aa22.13■■□□□ 1.13
CTNS-203ENST00000399306 PLIN1O60240 522 aa22.12■■□□□ 1.13
CTNS-203ENST00000399306 RRP1P56182 461 aaKnown RBP22.12■■□□□ 1.13
CTNS-203ENST00000399306 PANK1Q8TE04 598 aa22.12■■□□□ 1.13
CTNS-203ENST00000399306 CCDC85AQ96PX6 553 aaPredicted RBP22.12■■□□□ 1.13
CTNS-203ENST00000399306 RTFDC1Q9BY42 306 aaPredicted RBP22.12■■□□□ 1.13
CTNS-203ENST00000399306 PODXL2Q9NZ53 605 aa22.12■■□□□ 1.13
CTNS-203ENST00000399306 SUPT20HQ8NEM7 779 aa22.11■■□□□ 1.13
CTNS-203ENST00000399306 ZNF219Q9P2Y4 722 aaPredicted RBP22.11■■□□□ 1.13
CTNS-203ENST00000399306 CHMP3Q9Y3E7 222 aa22.11■■□□□ 1.13
CTNS-203ENST00000399306 LRRFIP2Q9Y608 721 aaKnown RBP22.11■■□□□ 1.13
CTNS-203ENST00000399306 DICER1Q9UPY3 1922 aaKnown RBP22.11■■□□□ 1.13
CTNS-203ENST00000399306 COL4A1P02462 1669 aa22.11■■□□□ 1.13
CTNS-203ENST00000399306 ZC3H4Q9UPT8 1303 aaKnown RBP22.1■■□□□ 1.13
CTNS-203ENST00000399306 LMNB1P20700 586 aa22.1■■□□□ 1.13
CTNS-203ENST00000399306 LTBP1Q14766 1721 aa22.1■■□□□ 1.13
CTNS-203ENST00000399306 MPNDQ8N594 471 aa22.1■■□□□ 1.13
CTNS-203ENST00000399306 MPHOSPH8Q99549 860 aa22.1■■□□□ 1.13
CTNS-203ENST00000399306 FBXO3Q9UK99 471 aa22.1■■□□□ 1.13
CTNS-203ENST00000399306 TAF7LQ5H9L4 462 aa22.08■■□□□ 1.13
CTNS-203ENST00000399306 DPP8Q6V1X1 898 aaPredicted RBP22.08■■□□□ 1.13
CTNS-203ENST00000399306 CCDC88AQ3V6T2 1871 aa22.08■■□□□ 1.13
CTNS-203ENST00000399306 OLFM4Q6UX06 510 aa22.07■■□□□ 1.12
CTNS-203ENST00000399306 ANKRD2Q9GZV1 360 aa22.07■■□□□ 1.12
CTNS-203ENST00000399306 MINPP1Q9UNW1 487 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms