RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 JAK2O60674 1132 aa16.5■□□□□ 0.23
APOB-202ENST00000399256 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
APOB-202ENST00000399256 RPS6KB1P23443 525 aa16.5■□□□□ 0.23
APOB-202ENST00000399256 CEBPZQ03701 1054 aaKnown RBP16.5■□□□□ 0.23
APOB-202ENST00000399256 CCDC8Q9H0W5 538 aaPredicted RBP16.5■□□□□ 0.23
APOB-202ENST00000399256 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 KCNQ3O43525 872 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 C11orf57Q6ZUT1 292 aaPredicted RBP16.49■□□□□ 0.23
APOB-202ENST00000399256 LRRC8AQ8IWT6 810 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 KIF18AQ8NI77 898 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 C9orf78Q9NZ63 289 aaPredicted RBP16.49■□□□□ 0.23
APOB-202ENST00000399256 HOXC9P31274 260 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 NLRP6P59044 892 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 ANKRD1Q15327 319 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 ADCY9O60503 1353 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 A0A087WWV3 80 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 ZNF215Q9UL58 517 aaPredicted RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 PROSER2Q86WR7 435 aaPredicted RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 FSD1Q9BTV5 496 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 BOLA2Q9H3K6 86 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 BABAM1Q9NWV8 329 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 TRMT1Q9NXH9 659 aaKnown RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 TLR7Q9NYK1 1049 aaKnown RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 GABPB1Q06547 395 aaPredicted RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 BRF1Q92994 677 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 MORC2Q9Y6X9 1032 aaPredicted RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 CDC25BP30305 580 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 FOSBP53539 338 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 RNF20Q5VTR2 975 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 LGR6Q9HBX8 967 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 IQCB1Q15051 598 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 PTPN14Q15678 1187 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 KMT5BQ4FZB7 885 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 FILIP1Q7Z7B0 1213 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 EAF2Q96CJ1 260 aaPredicted RBP16.47■□□□□ 0.23
APOB-202ENST00000399256 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 SLFN14P0C7P3 912 aa16.46■□□□□ 0.23
APOB-202ENST00000399256 SKILP12757 684 aa16.46■□□□□ 0.23
APOB-202ENST00000399256 RESTQ13127 1097 aa16.46■□□□□ 0.23
APOB-202ENST00000399256 ZNF589Q86UQ0 364 aaPredicted RBP16.46■□□□□ 0.23
APOB-202ENST00000399256 MTX1Q13505 466 aa16.46■□□□□ 0.23
APOB-202ENST00000399256 CWF19L2Q2TBE0 894 aaKnown RBP16.46■□□□□ 0.23
APOB-202ENST00000399256 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.23
APOB-202ENST00000399256 H3BQV1 296 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 HIP1O00291 1037 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 IFFO2Q5TF58 517 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 MAP3K2Q9Y2U5 619 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 ZNF397Q8NF99 534 aaPredicted RBP16.45■□□□□ 0.22
APOB-202ENST00000399256 FBXW7Q969H0 707 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 SASH1O94885 1247 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
APOB-202ENST00000399256 ELF2Q15723 593 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 FTOQ9C0B1 505 aaKnown RBP eCLIP16.45■□□□□ 0.22
APOB-202ENST00000399256 SIL1Q9H173 461 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 NPHP1O15259 732 aa16.44■□□□□ 0.22
APOB-202ENST00000399256 KRT222Q8N1A0 295 aa16.44■□□□□ 0.22
APOB-202ENST00000399256 EDC3Q96F86 508 aaKnown RBP16.44■□□□□ 0.22
APOB-202ENST00000399256 TMEM94Q12767 1356 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 BECN2A8MW95 431 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
APOB-202ENST00000399256 SARM1Q6SZW1 724 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 NYAP1Q6ZVC0 841 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 MRFAP1L1Q96HT8 127 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 STX1AQ16623 288 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 FBXO38Q6PIJ6 1188 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 CCZ1BP86790 482 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 CCZ1P86791 482 aaPredicted RBP16.43■□□□□ 0.22
APOB-202ENST00000399256 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
APOB-202ENST00000399256 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
APOB-202ENST00000399256 ERCC4Q92889 916 aaPredicted RBP16.43■□□□□ 0.22
APOB-202ENST00000399256 GOLPH3LQ9H4A5 285 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 MED23Q9ULK4 1368 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 CAVIN2O95810 425 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 TERF2Q15554 542 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 SUCLG2Q96I99 432 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 LRRC2Q9BYS8 371 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 ALDH8A1Q9H2A2 487 aaPredicted RBP16.42■□□□□ 0.22
APOB-202ENST00000399256 PIK3C2AO00443 1686 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 NEMFO60524 1076 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 Q6ZUG5 572 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 SNRKQ9NRH2 765 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 XIRP1Q702N8 1843 aaKnown RBP16.41■□□□□ 0.22
APOB-202ENST00000399256 GIGYF1O75420 1035 aaPredicted RBP16.41■□□□□ 0.22
APOB-202ENST00000399256 KLHDC4Q8TBB5 520 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 BICC1Q9H694 974 aaKnown RBP16.41■□□□□ 0.22
APOB-202ENST00000399256 ST7Q9NRC1 585 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 BTBD11A6QL63 1104 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 DHX40Q8IX18 779 aaKnown RBP16.41■□□□□ 0.22
APOB-202ENST00000399256 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
APOB-202ENST00000399256 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 CEMIPQ8WUJ3 1361 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 TAF3Q5VWG9 929 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 C19orf44Q9H6X5 657 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms