RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 PRR5LQ6MZQ0 368 aa11.15□□□□□ -0.62
BRCC3-206ENST00000399042 SYNE4Q8N205 404 aa11.15□□□□□ -0.62
BRCC3-206ENST00000399042 RPGRQ92834 1020 aaKnown RBP11.15□□□□□ -0.62
BRCC3-206ENST00000399042 PDE8AO60658 829 aa11.14□□□□□ -0.63
BRCC3-206ENST00000399042 PDE6BP35913 854 aa11.14□□□□□ -0.63
BRCC3-206ENST00000399042 AAMPQ13685 434 aa11.14□□□□□ -0.63
BRCC3-206ENST00000399042 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
BRCC3-206ENST00000399042 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
BRCC3-206ENST00000399042 SUCLG2Q96I99 432 aa11.14□□□□□ -0.63
BRCC3-206ENST00000399042 HMMRO75330 724 aa11.13□□□□□ -0.63
BRCC3-206ENST00000399042 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
BRCC3-206ENST00000399042 LMBR1LQ6UX01 489 aa11.13□□□□□ -0.63
BRCC3-206ENST00000399042 DDX46Q7L014 1031 aaKnown RBP11.13□□□□□ -0.63
BRCC3-206ENST00000399042 BRIP1Q9BX63 1249 aa11.13□□□□□ -0.63
BRCC3-206ENST00000399042 TMX4Q9H1E5 349 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-206ENST00000399042 BICC1Q9H694 974 aaKnown RBP11.13□□□□□ -0.63
BRCC3-206ENST00000399042 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
BRCC3-206ENST00000399042 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-206ENST00000399042 CDHR2Q9BYE9 1310 aa11.12□□□□□ -0.63
BRCC3-206ENST00000399042 H0YIN7 160 aa11.12□□□□□ -0.63
BRCC3-206ENST00000399042 SRGAP3O43295 1099 aa11.12□□□□□ -0.63
BRCC3-206ENST00000399042 CTSWP56202 376 aa11.12□□□□□ -0.63
BRCC3-206ENST00000399042 IFIT5Q13325 482 aaKnown RBP11.12□□□□□ -0.63
BRCC3-206ENST00000399042 OS9Q13438 667 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-206ENST00000399042 C2CD5Q86YS7 1000 aa11.12□□□□□ -0.63
BRCC3-206ENST00000399042 ZNF622Q969S3 477 aaKnown RBP eCLIP11.12□□□□□ -0.63
BRCC3-206ENST00000399042 RBM17Q96I25 401 aaKnown RBP11.12□□□□□ -0.63
BRCC3-206ENST00000399042 BCL11AQ9H165 835 aa11.12□□□□□ -0.63
BRCC3-206ENST00000399042 IBTKQ9P2D0 1353 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-206ENST00000399042 UTYO14607 1347 aa11.11□□□□□ -0.63
BRCC3-206ENST00000399042 ARFGEF2Q9Y6D5 1785 aa11.11□□□□□ -0.63
BRCC3-206ENST00000399042 ANKRD18BA2A2Z9 1011 aa11.11□□□□□ -0.63
BRCC3-206ENST00000399042 SLC10A5Q5PT55 438 aa11.11□□□□□ -0.63
BRCC3-206ENST00000399042 RPAP2Q8IXW5 612 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-206ENST00000399042 RWDD1Q9H446 243 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-206ENST00000399042 SCN7AQ01118 1682 aa11.11□□□□□ -0.63
BRCC3-206ENST00000399042 C4AP0C0L4 1744 aa11.1□□□□□ -0.63
BRCC3-206ENST00000399042 IGHMBP2P38935 993 aaKnown RBP11.1□□□□□ -0.63
BRCC3-206ENST00000399042 CASP7P55210 303 aa11.1□□□□□ -0.63
BRCC3-206ENST00000399042 CCDC136Q96JN2 1154 aa11.1□□□□□ -0.63
BRCC3-206ENST00000399042 CDC5LQ99459 802 aaKnown RBP11.1□□□□□ -0.63
BRCC3-206ENST00000399042 MPHOSPH8Q99549 860 aa11.1□□□□□ -0.63
BRCC3-206ENST00000399042 PLA2G12BQ9BX93 195 aa11.1□□□□□ -0.63
BRCC3-206ENST00000399042 PDZRN3Q9UPQ7 1066 aa11.1□□□□□ -0.63
BRCC3-206ENST00000399042 ABCC12Q96J65 1359 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 ITGA6P23229 1130 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 FOXO4P98177 505 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 ATP8B2P98198 1209 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.63
BRCC3-206ENST00000399042 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 EPHA10Q5JZY3 1008 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 ANKRD18AQ8IVF6 992 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 TTLL11Q8NHH1 800 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 GREM2Q9H772 168 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 CNNM1Q9NRU3 951 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 NUP98P52948 1817 aa11.09□□□□□ -0.63
BRCC3-206ENST00000399042 BCORQ6W2J9 1755 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 TUBGCP6Q96RT7 1819 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 APBB1O00213 710 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 SURF6O75683 361 aaKnown RBP11.08□□□□□ -0.64
BRCC3-206ENST00000399042 NPR1P16066 1061 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 ALDH1B1P30837 517 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 PTGER2P43116 358 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 SF3B3Q15393 1217 aaKnown RBP11.08□□□□□ -0.64
BRCC3-206ENST00000399042 CEP85Q6P2H3 762 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 ANKRD44Q8N8A2 993 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 MASTLQ96GX5 879 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 SIL1Q9H173 461 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 CD2APQ9Y5K6 639 aa11.08□□□□□ -0.64
BRCC3-206ENST00000399042 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 HAX1O00165 279 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 CSF1RP07333 972 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 CHRNA5P30532 468 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 TGFB2P61812 414 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 HSP90AB4PQ58FF6 505 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 LDHAL6AQ6ZMR3 332 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 CNKSR1Q969H4 720 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 KAZALD1Q96I82 304 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 SEC31BQ9NQW1 1179 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 PPP4R2Q9NY27 417 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 WWC3Q9ULE0 1092 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
BRCC3-206ENST00000399042 AFDNP55196 1824 aaKnown RBP11.07□□□□□ -0.64
BRCC3-206ENST00000399042 QSER1Q2KHR3 1735 aa11.06□□□□□ -0.64
BRCC3-206ENST00000399042 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
BRCC3-206ENST00000399042 DPEP1P16444 411 aa11.06□□□□□ -0.64
BRCC3-206ENST00000399042 RPS8P62241 208 aaKnown RBP11.06□□□□□ -0.64
BRCC3-206ENST00000399042 RABL6Q3YEC7 729 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-206ENST00000399042 PELP1Q8IZL8 1130 aaKnown RBP11.06□□□□□ -0.64
BRCC3-206ENST00000399042 ZNF594Q96JF6 807 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-206ENST00000399042 GTF3C3Q9Y5Q9 886 aa11.06□□□□□ -0.64
BRCC3-206ENST00000399042 PPEF1O14829 653 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-206ENST00000399042 BBOX1O75936 387 aa11.05□□□□□ -0.64
BRCC3-206ENST00000399042 SRGNP10124 158 aa11.05□□□□□ -0.64
BRCC3-206ENST00000399042 KCNJ4P48050 445 aa11.05□□□□□ -0.64
BRCC3-206ENST00000399042 GRAPQ13588 217 aa11.05□□□□□ -0.64
BRCC3-206ENST00000399042 STYK1Q6J9G0 422 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms