RNA–Protein interactions for RNA: ENST00000399010.5

TTC3-203, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene TTC3, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-203ENST00000399010 PNMA6EA0A0J9YXQ4 647 aa23.04■■□□□ 1.28
TTC3-203ENST00000399010 FAM161AQ3B820 660 aa23.04■■□□□ 1.28
TTC3-203ENST00000399010 SPEF2Q9C093 1822 aa23.04■■□□□ 1.28
TTC3-203ENST00000399010 SRGAP3O43295 1099 aa23.03■■□□□ 1.28
TTC3-203ENST00000399010 GREM2Q9H772 168 aa23.03■■□□□ 1.28
TTC3-203ENST00000399010 CSF1RP07333 972 aa23.03■■□□□ 1.28
TTC3-203ENST00000399010 SIRT2Q8IXJ6 389 aa23.03■■□□□ 1.28
TTC3-203ENST00000399010 ATP8B2P98198 1209 aa23.02■■□□□ 1.28
TTC3-203ENST00000399010 CCDC152Q4G0S7 254 aa23.02■■□□□ 1.28
TTC3-203ENST00000399010 RPAP2Q8IXW5 612 aaPredicted RBP23.02■■□□□ 1.28
TTC3-203ENST00000399010 KLHL34Q8N239 644 aa23.02■■□□□ 1.28
TTC3-203ENST00000399010 CACNA1SQ13698 1873 aa23.01■■□□□ 1.27
TTC3-203ENST00000399010 PDE6BP35913 854 aa23.01■■□□□ 1.27
TTC3-203ENST00000399010 MTX1Q13505 466 aa23.01■■□□□ 1.27
TTC3-203ENST00000399010 SF3B3Q15393 1217 aaKnown RBP23.01■■□□□ 1.27
TTC3-203ENST00000399010 PPP1R1BQ9UD71 204 aaPredicted RBP23.01■■□□□ 1.27
TTC3-203ENST00000399010 COL4A1P02462 1669 aa23■■□□□ 1.27
TTC3-203ENST00000399010 ERICH6BQ5W0A0 696 aa23■■□□□ 1.27
TTC3-203ENST00000399010 ITGA6P23229 1130 aa22.99■■□□□ 1.27
TTC3-203ENST00000399010 RPGRQ92834 1020 aaKnown RBP22.99■■□□□ 1.27
TTC3-203ENST00000399010 SEC31BQ9NQW1 1179 aa22.99■■□□□ 1.27
TTC3-203ENST00000399010 GTF3C3Q9Y5Q9 886 aa22.99■■□□□ 1.27
TTC3-203ENST00000399010 IFIT5Q13325 482 aaKnown RBP22.99■■□□□ 1.27
TTC3-203ENST00000399010 CCDC57Q2TAC2 916 aa22.99■■□□□ 1.27
TTC3-203ENST00000399010 CRY2Q49AN0 593 aa22.99■■□□□ 1.27
TTC3-203ENST00000399010 KLHDC4Q8TBB5 520 aa22.99■■□□□ 1.27
TTC3-203ENST00000399010 DLEC1Q9Y238 1755 aa22.98■■□□□ 1.27
TTC3-203ENST00000399010 KLRG2A4D1S0 409 aaPredicted RBP22.98■■□□□ 1.27
TTC3-203ENST00000399010 C2CD5Q86YS7 1000 aa22.98■■□□□ 1.27
TTC3-203ENST00000399010 KIAA1551Q9HCM1 1747 aa22.98■■□□□ 1.27
TTC3-203ENST00000399010 CHRNA5P30532 468 aa22.97■■□□□ 1.27
TTC3-203ENST00000399010 POLA2Q14181 598 aa22.97■■□□□ 1.27
TTC3-203ENST00000399010 SSH3Q8TE77 659 aa22.97■■□□□ 1.27
TTC3-203ENST00000399010 RTL9Q8NET4 1388 aa22.97■■□□□ 1.27
TTC3-203ENST00000399010 ANKRD18BA2A2Z9 1011 aa22.97■■□□□ 1.27
TTC3-203ENST00000399010 HMMRO75330 724 aa22.97■■□□□ 1.27
TTC3-203ENST00000399010 ZNF594Q96JF6 807 aaPredicted RBP22.97■■□□□ 1.27
TTC3-203ENST00000399010 RFX5P48382 616 aaPredicted RBP22.96■■□□□ 1.27
TTC3-203ENST00000399010 DDX46Q7L014 1031 aaKnown RBP22.96■■□□□ 1.27
TTC3-203ENST00000399010 PA2G4Q9UQ80 394 aaKnown RBP22.96■■□□□ 1.27
TTC3-203ENST00000399010 SRGNP10124 158 aa22.96■■□□□ 1.27
TTC3-203ENST00000399010 TAF7LQ5H9L4 462 aa22.96■■□□□ 1.27
TTC3-203ENST00000399010 H0YIN7 160 aa22.95■■□□□ 1.26
TTC3-203ENST00000399010 IGHDP01880 384 aa22.94■■□□□ 1.26
TTC3-203ENST00000399010 SIL1Q9H173 461 aa22.94■■□□□ 1.26
TTC3-203ENST00000399010 PPP4R2Q9NY27 417 aa22.94■■□□□ 1.26
TTC3-203ENST00000399010 CELF1Q92879 486 aaKnown RBP22.94■■□□□ 1.26
TTC3-203ENST00000399010 RBM17Q96I25 401 aaKnown RBP22.94■■□□□ 1.26
TTC3-203ENST00000399010 CCDC136Q96JN2 1154 aa22.94■■□□□ 1.26
TTC3-203ENST00000399010 NPR1P16066 1061 aa22.93■■□□□ 1.26
TTC3-203ENST00000399010 PTPN12Q05209 780 aaKnown RBP22.93■■□□□ 1.26
TTC3-203ENST00000399010 HDAC1Q13547 482 aaPredicted RBP22.93■■□□□ 1.26
TTC3-203ENST00000399010 B4GALNT3Q6L9W6 998 aa22.93■■□□□ 1.26
TTC3-203ENST00000399010 ZNF622Q969S3 477 aaKnown RBP eCLIP22.93■■□□□ 1.267e-16■■□□□ 12.6
TTC3-203ENST00000399010 RWDD1Q9H446 243 aaPredicted RBP22.93■■□□□ 1.26
TTC3-203ENST00000399010 LRP5O75197 1615 aa22.93■■□□□ 1.26
TTC3-203ENST00000399010 A0A0G2JLW4 131 aa22.93■■□□□ 1.26
TTC3-203ENST00000399010 MASTLQ96GX5 879 aa22.93■■□□□ 1.26
TTC3-203ENST00000399010 CDC5LQ99459 802 aaKnown RBP22.93■■□□□ 1.26
TTC3-203ENST00000399010 CD2APQ9Y5K6 639 aa22.93■■□□□ 1.26
TTC3-203ENST00000399010 DPEP1P16444 411 aa22.92■■□□□ 1.26
TTC3-203ENST00000399010 HOXA10P31260 410 aaPredicted RBP22.92■■□□□ 1.26
TTC3-203ENST00000399010 SURF6O75683 361 aaKnown RBP22.91■■□□□ 1.26
TTC3-203ENST00000399010 EXOC6BQ9Y2D4 811 aa22.91■■□□□ 1.26
TTC3-203ENST00000399010 GRAPQ13588 217 aa22.91■■□□□ 1.26
TTC3-203ENST00000399010 ANKRD18AQ8IVF6 992 aa22.91■■□□□ 1.26
TTC3-203ENST00000399010 GRAPLQ8TC17 118 aaPredicted RBP22.91■■□□□ 1.26
TTC3-203ENST00000399010 COPRSQ9NQ92 184 aa22.91■■□□□ 1.26
TTC3-203ENST00000399010 IGHMBP2P38935 993 aaKnown RBP22.9■■□□□ 1.26
TTC3-203ENST00000399010 PUS3Q9BZE2 481 aaKnown RBP22.9■■□□□ 1.26
TTC3-203ENST00000399010 PDZRN3Q9UPQ7 1066 aa22.9■■□□□ 1.26
TTC3-203ENST00000399010 BRCA1P38398 1863 aaKnown RBP22.9■■□□□ 1.26
TTC3-203ENST00000399010 TGFB2P61812 414 aa22.9■■□□□ 1.26
TTC3-203ENST00000399010 CRAMP1Q96RY5 1269 aa22.9■■□□□ 1.26
TTC3-203ENST00000399010 FHDC1Q9C0D6 1143 aaPredicted RBP22.9■■□□□ 1.26
TTC3-203ENST00000399010 SLX4Q8IY92 1834 aa22.9■■□□□ 1.26
TTC3-203ENST00000399010 APBB1O00213 710 aa22.89■■□□□ 1.25
TTC3-203ENST00000399010 RPS8P62241 208 aaKnown RBP22.89■■□□□ 1.25
TTC3-203ENST00000399010 STYK1Q6J9G0 422 aa22.89■■□□□ 1.25
TTC3-203ENST00000399010 LDHAL6AQ6ZMR3 332 aa22.89■■□□□ 1.25
TTC3-203ENST00000399010 MPHOSPH8Q99549 860 aa22.89■■□□□ 1.25
TTC3-203ENST00000399010 OS9Q13438 667 aaPredicted RBP22.88■■□□□ 1.25
TTC3-203ENST00000399010 LRRC24Q50LG9 513 aa22.88■■□□□ 1.25
TTC3-203ENST00000399010 NLGN2Q8NFZ4 835 aa22.88■■□□□ 1.25
TTC3-203ENST00000399010 CNNM1Q9NRU3 951 aa22.88■■□□□ 1.25
TTC3-203ENST00000399010 WWC3Q9ULE0 1092 aa22.88■■□□□ 1.25
TTC3-203ENST00000399010 A0A1B0GUL6 1792 aa22.88■■□□□ 1.25
TTC3-203ENST00000399010 SLC51AQ86UW1 340 aa22.88■■□□□ 1.25
TTC3-203ENST00000399010 KCNA3P22001 575 aa22.87■■□□□ 1.25
TTC3-203ENST00000399010 ALDH1B1P30837 517 aa22.87■■□□□ 1.25
TTC3-203ENST00000399010 DCTPP1Q9H773 170 aa22.87■■□□□ 1.25
TTC3-203ENST00000399010 EYA2O00167 538 aa22.87■■□□□ 1.25
TTC3-203ENST00000399010 G3BP1Q13283 466 aaKnown RBP eCLIP22.87■■□□□ 1.25
TTC3-203ENST00000399010 NOP58Q9Y2X3 529 aaKnown RBP22.87■■□□□ 1.25
TTC3-203ENST00000399010 SRCAPQ6ZRS2 3230 aa22.86■■□□□ 1.25
TTC3-203ENST00000399010 PPEF1O14829 653 aaPredicted RBP22.85■■□□□ 1.25
TTC3-203ENST00000399010 ATG9AQ7Z3C6 839 aa22.85■■□□□ 1.25
TTC3-203ENST00000399010 CNKSR1Q969H4 720 aa22.85■■□□□ 1.25
TTC3-203ENST00000399010 PRPF40BQ6NWY9 871 aaKnown RBP22.85■■□□□ 1.25
TTC3-203ENST00000399010 BCL11AQ9H165 835 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms