RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 G3BP1Q13283 466 aaKnown RBP eCLIP13.54□□□□□ -0.24
RCC1-204ENST00000398958 MYRIPQ8NFW9 859 aa13.54□□□□□ -0.24
RCC1-204ENST00000398958 TSC1Q92574 1164 aa13.54□□□□□ -0.24
RCC1-204ENST00000398958 DNAJC2Q99543 621 aaKnown RBP13.54□□□□□ -0.24
RCC1-204ENST00000398958 DIAPH3Q9NSV4 1193 aa13.54□□□□□ -0.24
RCC1-204ENST00000398958 ATG3Q9NT62 314 aa13.54□□□□□ -0.24
RCC1-204ENST00000398958 HSP90AB3PQ58FF7 597 aa13.53□□□□□ -0.24
RCC1-204ENST00000398958 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
RCC1-204ENST00000398958 SGSM2O43147 1006 aa13.53□□□□□ -0.24
RCC1-204ENST00000398958 PPFIA3O75145 1194 aa13.53□□□□□ -0.24
RCC1-204ENST00000398958 DDB1Q16531 1140 aa13.53□□□□□ -0.24
RCC1-204ENST00000398958 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
RCC1-204ENST00000398958 PRPF40BQ6NWY9 871 aaKnown RBP13.53□□□□□ -0.24
RCC1-204ENST00000398958 PUS3Q9BZE2 481 aaKnown RBP13.53□□□□□ -0.24
RCC1-204ENST00000398958 HEG1Q9ULI3 1381 aa13.52□□□□□ -0.24
RCC1-204ENST00000398958 CACNA1FO60840 1977 aa13.52□□□□□ -0.24
RCC1-204ENST00000398958 ZNF830Q96NB3 372 aaPredicted RBP13.52□□□□□ -0.24
RCC1-204ENST00000398958 SNRKQ9NRH2 765 aa13.52□□□□□ -0.24
RCC1-204ENST00000398958 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.24
RCC1-204ENST00000398958 ALDH1L1O75891 902 aa13.52□□□□□ -0.25
RCC1-204ENST00000398958 TFCP2Q12800 502 aa13.52□□□□□ -0.25
RCC1-204ENST00000398958 HELBQ8NG08 1087 aaPredicted RBP13.52□□□□□ -0.25
RCC1-204ENST00000398958 METTL22Q9BUU2 404 aaPredicted RBP13.52□□□□□ -0.25
RCC1-204ENST00000398958 ECHDC1Q9NTX5 307 aa13.52□□□□□ -0.25
RCC1-204ENST00000398958 SYAP1Q96A49 352 aaPredicted RBP13.51□□□□□ -0.25
RCC1-204ENST00000398958 LSG1Q9H089 658 aaKnown RBP13.51□□□□□ -0.25
RCC1-204ENST00000398958 ABCA3Q99758 1704 aa13.51□□□□□ -0.25
RCC1-204ENST00000398958 CASTP20810 708 aaKnown RBP13.51□□□□□ -0.25
RCC1-204ENST00000398958 LRRC24Q50LG9 513 aa13.51□□□□□ -0.25
RCC1-204ENST00000398958 TAF6LQ9Y6J9 622 aa13.51□□□□□ -0.25
RCC1-204ENST00000398958 LARGE1O95461 756 aa13.5□□□□□ -0.25
RCC1-204ENST00000398958 DMTNQ08495 405 aa13.5□□□□□ -0.25
RCC1-204ENST00000398958 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
RCC1-204ENST00000398958 HSPA4P34932 840 aa13.5□□□□□ -0.25
RCC1-204ENST00000398958 KCNJ4P48050 445 aa13.5□□□□□ -0.25
RCC1-204ENST00000398958 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
RCC1-204ENST00000398958 C5P01031 1676 aa13.49□□□□□ -0.25
RCC1-204ENST00000398958 BRD1O95696 1058 aa13.49□□□□□ -0.25
RCC1-204ENST00000398958 ATP6V1AP38606 617 aa13.49□□□□□ -0.25
RCC1-204ENST00000398958 AK2P54819 239 aa13.49□□□□□ -0.25
RCC1-204ENST00000398958 NMIQ13287 307 aaPredicted RBP13.49□□□□□ -0.25
RCC1-204ENST00000398958 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
RCC1-204ENST00000398958 PHLPP1O60346 1717 aa13.49□□□□□ -0.25
RCC1-204ENST00000398958 HCLS1P14317 486 aaPredicted RBP13.49□□□□□ -0.25
RCC1-204ENST00000398958 CBX1P83916 185 aa13.49□□□□□ -0.25
RCC1-204ENST00000398958 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.253e-26■■□□□ 13.5
RCC1-204ENST00000398958 HSP90AB4PQ58FF6 505 aa13.49□□□□□ -0.25
RCC1-204ENST00000398958 PRIMPOLQ96LW4 560 aa13.49□□□□□ -0.25
RCC1-204ENST00000398958 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
RCC1-204ENST00000398958 A0A0D9SFI3 127 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 ZSCAN20P17040 1043 aaPredicted RBP13.48□□□□□ -0.25
RCC1-204ENST00000398958 DDX46Q7L014 1031 aaKnown RBP13.48□□□□□ -0.25
RCC1-204ENST00000398958 LRP10Q7Z4F1 713 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 ZNF710Q8N1W2 664 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 JAKMIP1Q96N16 626 aaKnown RBP13.48□□□□□ -0.25
RCC1-204ENST00000398958 FSD1Q9BTV5 496 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 OVOS2A0A0G2JMS6 1433 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 RAD50Q92878 1312 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 HMGN5P82970 282 aaKnown RBP13.48□□□□□ -0.25
RCC1-204ENST00000398958 MTX1Q13505 466 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 UTP14CQ5TAP6 766 aaKnown RBP13.48□□□□□ -0.25
RCC1-204ENST00000398958 CCDC129Q6ZRS4 1044 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 C17orf53Q8N3J3 647 aaPredicted RBP13.48□□□□□ -0.25
RCC1-204ENST00000398958 PIBF1Q8WXW3 757 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 USP25Q9UHP3 1055 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 GADD45BO75293 160 aaPredicted RBP13.48□□□□□ -0.25
RCC1-204ENST00000398958 PHF14O94880 888 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
RCC1-204ENST00000398958 SEC62Q99442 399 aaKnown RBP13.48□□□□□ -0.25
RCC1-204ENST00000398958 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
RCC1-204ENST00000398958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
RCC1-204ENST00000398958 TUBGCP6Q96RT7 1819 aa13.47□□□□□ -0.25
RCC1-204ENST00000398958 PI16Q6UXB8 463 aa13.47□□□□□ -0.25
RCC1-204ENST00000398958 RUFY3Q7L099 469 aa13.47□□□□□ -0.25
RCC1-204ENST00000398958 DBNDD2Q9BQY9 259 aa13.47□□□□□ -0.25
RCC1-204ENST00000398958 TAF7LQ5H9L4 462 aa13.47□□□□□ -0.25
RCC1-204ENST00000398958 ZNF589Q86UQ0 364 aaPredicted RBP13.47□□□□□ -0.25
RCC1-204ENST00000398958 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
RCC1-204ENST00000398958 SLC51AQ86UW1 340 aa13.46□□□□□ -0.25
RCC1-204ENST00000398958 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.25
RCC1-204ENST00000398958 CHMP4AQ9BY43 222 aa13.46□□□□□ -0.25
RCC1-204ENST00000398958 AOX1Q06278 1338 aa13.46□□□□□ -0.26
RCC1-204ENST00000398958 WTIPA6NIX2 430 aaPredicted RBP13.46□□□□□ -0.26
RCC1-204ENST00000398958 MCM2P49736 904 aa13.46□□□□□ -0.26
RCC1-204ENST00000398958 STK11IPQ8N1F8 1099 aa13.46□□□□□ -0.26
RCC1-204ENST00000398958 GPATCH3Q96I76 525 aa13.46□□□□□ -0.26
RCC1-204ENST00000398958 AHDC1Q5TGY3 1603 aaPredicted RBP13.45□□□□□ -0.26
RCC1-204ENST00000398958 TTC41PQ6P2S7 1318 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 ERVV-2B6SEH9 535 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 ADCY5O95622 1261 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 PTPN12Q05209 780 aaKnown RBP13.45□□□□□ -0.26
RCC1-204ENST00000398958 UVSSAQ2YD98 709 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 PLBD2Q8NHP8 589 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 CWC25Q9NXE8 425 aaPredicted RBP13.45□□□□□ -0.26
RCC1-204ENST00000398958 DBNLQ9UJU6 430 aaKnown RBP13.45□□□□□ -0.26
RCC1-204ENST00000398958 IQSEC3Q9UPP2 1182 aaPredicted RBP13.45□□□□□ -0.26
RCC1-204ENST00000398958 KIF3AQ9Y496 699 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 COL16A1Q07092 1604 aaPredicted RBP13.45□□□□□ -0.26
RCC1-204ENST00000398958 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms