RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 PNNQ9H307 717 aaKnown RBP8.25□□□□□ -1.09
SMARCE1P6-201ENST00000398372 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1P6-201ENST00000398372 USP16Q9Y5T5 823 aa8.25□□□□□ -1.09
SMARCE1P6-201ENST00000398372 ARFGEF2Q9Y6D5 1785 aa8.25□□□□□ -1.09
SMARCE1P6-201ENST00000398372 COL4A5P29400 1685 aa8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 A0A087WZG4 1122 aa8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 FZD9O00144 591 aa8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 SNRPA1P09661 255 aaKnown RBP8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 PIP4K2AP48426 406 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 RRP1P56182 461 aaKnown RBP8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 NFE2L2Q16236 605 aa8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 HABP4Q5JVS0 413 aaKnown RBP8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 STYK1Q6J9G0 422 aa8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 SAPCD2Q86UD0 394 aa8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 THUMPD2Q9BTF0 503 aaKnown RBP8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 MIS18AQ9NYP9 233 aa8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 TBC1D2BQ9UPU7 963 aa8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 MAPK8IP3Q9UPT6 1336 aa8.24□□□□□ -1.09
SMARCE1P6-201ENST00000398372 CA12O43570 354 aa8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 IL6STP40189 918 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 BRPF1P55201 1214 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 FKBP4Q02790 459 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 NPM2Q86SE8 214 aaKnown RBP8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 SPDYE1Q8NFV5 336 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 CNKSR1Q969H4 720 aa8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 RCAN3Q9UKA8 241 aa8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 STK24Q9Y6E0 443 aa8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 ZNF521Q96K83 1311 aa8.23□□□□□ -1.09
SMARCE1P6-201ENST00000398372 KDM3BQ7LBC6 1761 aa8.22□□□□□ -1.09
SMARCE1P6-201ENST00000398372 PDIA4P13667 645 aaKnown RBP8.22□□□□□ -1.09
SMARCE1P6-201ENST00000398372 RIPK4P57078 832 aa8.22□□□□□ -1.09
SMARCE1P6-201ENST00000398372 FGD1P98174 961 aa8.22□□□□□ -1.09
SMARCE1P6-201ENST00000398372 PDE4CQ08493 712 aa8.22□□□□□ -1.09
SMARCE1P6-201ENST00000398372 DLK2Q6UY11 383 aa8.22□□□□□ -1.09
SMARCE1P6-201ENST00000398372 SLC51AQ86UW1 340 aa8.22□□□□□ -1.09
SMARCE1P6-201ENST00000398372 GPC2Q8N158 579 aa8.22□□□□□ -1.09
SMARCE1P6-201ENST00000398372 RNF25Q96BH1 459 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1P6-201ENST00000398372 GJA3Q9Y6H8 435 aa8.22□□□□□ -1.09
SMARCE1P6-201ENST00000398372 SCN7AQ01118 1682 aa8.21□□□□□ -1.09
SMARCE1P6-201ENST00000398372 BCORQ6W2J9 1755 aa8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 CAMTA2O94983 1202 aa8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 CELF2O95319 508 aaKnown RBP8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 TMPOP42166 694 aaKnown RBP8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 SCNN1DP51172 638 aa8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 CCDC93Q567U6 631 aa8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 DZIP3Q86Y13 1208 aaKnown RBP8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 CCDC146Q8IYE0 955 aa8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 SYNE4Q8N205 404 aa8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 MASTLQ96GX5 879 aa8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 CCDC136Q96JN2 1154 aa8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 PDZRN3Q9UPQ7 1066 aa8.21□□□□□ -1.1
SMARCE1P6-201ENST00000398372 LAMB4A4D0S4 1761 aa8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 NBPF26B4DH59 902 aa8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 IARSP41252 1262 aaKnown RBP8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 NUBP1P53384 320 aa8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 EIF4A1P60842 406 aaKnown RBP8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 SOGA3Q5TF21 947 aa8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 NBPF10Q6P3W6 841 aaKnown RBP8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 NBPF15Q8N660 670 aa8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 GLIS2Q9BZE0 524 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 ZMYND15Q9H091 742 aa8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 ADAMTS8Q9UP79 889 aa8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 RRP7AQ9Y3A4 280 aaKnown RBP8.2□□□□□ -1.1
SMARCE1P6-201ENST00000398372 FAM155AB1AL88 458 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 FXR1P51114 621 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 IRX6P78412 446 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 GOLGA2Q08379 1002 aa8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 NEUROD2Q15784 382 aa8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 CNBD1Q8NA66 436 aa8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 RUNDC1Q96C34 613 aa8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 SETDB2Q96T68 719 aa8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 TSPYL4Q9UJ04 414 aa8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 HPS5Q9UPZ3 1129 aa8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 SNED1Q8TER0 1413 aa8.19□□□□□ -1.1
SMARCE1P6-201ENST00000398372 NUP98P52948 1817 aa8.18□□□□□ -1.1
SMARCE1P6-201ENST00000398372 TRPA1O75762 1119 aa8.18□□□□□ -1.1
SMARCE1P6-201ENST00000398372 LMOD3Q0VAK6 560 aa8.18□□□□□ -1.1
SMARCE1P6-201ENST00000398372 TAF7LQ5H9L4 462 aa8.18□□□□□ -1.1
SMARCE1P6-201ENST00000398372 USP50Q70EL3 339 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1P6-201ENST00000398372 TRMT2AQ8IZ69 625 aaKnown RBP8.18□□□□□ -1.1
SMARCE1P6-201ENST00000398372 HHIPL1Q96JK4 782 aa8.18□□□□□ -1.1
SMARCE1P6-201ENST00000398372 ZNF408Q9H9D4 720 aa8.18□□□□□ -1.1
SMARCE1P6-201ENST00000398372 RNF186Q9NXI6 227 aa8.18□□□□□ -1.1
SMARCE1P6-201ENST00000398372 NOP58Q9Y2X3 529 aaKnown RBP8.18□□□□□ -1.1
SMARCE1P6-201ENST00000398372 E9PSI1 815 aa8.17□□□□□ -1.1
SMARCE1P6-201ENST00000398372 NPHP1O15259 732 aa8.17□□□□□ -1.1
SMARCE1P6-201ENST00000398372 NPR1P16066 1061 aa8.17□□□□□ -1.1
SMARCE1P6-201ENST00000398372 LMOD1P29536 600 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1P6-201ENST00000398372 HIRAP54198 1017 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1P6-201ENST00000398372 DUSP27Q5VZP5 1158 aa8.17□□□□□ -1.1
SMARCE1P6-201ENST00000398372 CLEC4GQ6UXB4 293 aa8.17□□□□□ -1.1
SMARCE1P6-201ENST00000398372 RTKN2Q8IZC4 609 aa8.17□□□□□ -1.1
SMARCE1P6-201ENST00000398372 GCC1Q96CN9 775 aa8.17□□□□□ -1.1
SMARCE1P6-201ENST00000398372 ZNF652Q9Y2D9 606 aa8.17□□□□□ -1.1
SMARCE1P6-201ENST00000398372 KLRG2A4D1S0 409 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1P6-201ENST00000398372 FAM177BA6PVY3 158 aa8.16□□□□□ -1.1
SMARCE1P6-201ENST00000398372 DLL1O00548 723 aa8.16□□□□□ -1.1
SMARCE1P6-201ENST00000398372 RRP9O43818 475 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms