RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 CERKQ8TCT0 537 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 SLC4A9Q96Q91 983 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 ADAMTS2O95450 1211 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 ONECUT3O60422 494 aaPredicted RBP8.92□□□□□ -0.98
RGPD1-201ENST00000398193 ZBTB3Q9H5J0 574 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 SBF2Q86WG5 1849 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 MROH5Q6ZUA9 1318 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 LOC102724428A0A0B4J2F2 783 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 IGSF3O75054 1194 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 PSMA5P28066 241 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 SIK1P57059 783 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 GBP4Q96PP9 640 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 CUL4AQ13619 759 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 RNF20Q5VTR2 975 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 ANKRD18BA2A2Z9 1011 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 ZSCAN31Q96LW9 406 aaPredicted RBP8.91□□□□□ -0.98
RGPD1-201ENST00000398193 ATP6V1AP38606 617 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 CRKLP46109 303 aaKnown RBP8.91□□□□□ -0.98
RGPD1-201ENST00000398193 SLC4A3P48751 1232 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 KLHL34Q8N239 644 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 CARMIL3Q8ND23 1372 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 A0A1B0GUL6 1792 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 RGPD3A6NKT7 1758 aaPredicted RBP8.91□□□□□ -0.98
RGPD1-201ENST00000398193 RGPD4Q7Z3J3 1758 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 ZFYP08048 801 aaPredicted RBP8.91□□□□□ -0.98
RGPD1-201ENST00000398193 SSFA2P28290 1259 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 IFIT5Q13325 482 aaKnown RBP8.91□□□□□ -0.98
RGPD1-201ENST00000398193 KRT32Q14532 448 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 SKOR2Q2VWA4 1001 aaPredicted RBP8.91□□□□□ -0.98
RGPD1-201ENST00000398193 TMED8Q6PL24 325 aaPredicted RBP8.91□□□□□ -0.98
RGPD1-201ENST00000398193 UTP14AQ9BVJ6 771 aaKnown RBP8.91□□□□□ -0.98
RGPD1-201ENST00000398193 ANO2Q9NQ90 1003 aa8.91□□□□□ -0.98
RGPD1-201ENST00000398193 TAF1LQ8IZX4 1826 aa8.9□□□□□ -0.98
RGPD1-201ENST00000398193 CCDC171Q6TFL3 1326 aa8.9□□□□□ -0.98
RGPD1-201ENST00000398193 CAMTA2O94983 1202 aa8.9□□□□□ -0.98
RGPD1-201ENST00000398193 USPL1Q5W0Q7 1092 aa8.9□□□□□ -0.98
RGPD1-201ENST00000398193 CHMP4CQ96CF2 233 aa8.9□□□□□ -0.98
RGPD1-201ENST00000398193 DBNLQ9UJU6 430 aaKnown RBP8.9□□□□□ -0.98
RGPD1-201ENST00000398193 DUOX1Q9NRD9 1551 aa8.9□□□□□ -0.98
RGPD1-201ENST00000398193 PIP4K2BP78356 416 aa8.9□□□□□ -0.99
RGPD1-201ENST00000398193 MAP4K1Q92918 833 aa8.9□□□□□ -0.99
RGPD1-201ENST00000398193 ZBTB1Q9Y2K1 713 aa8.9□□□□□ -0.99
RGPD1-201ENST00000398193 U3KPZ7 1027 aaPredicted RBP8.9□□□□□ -0.99
RGPD1-201ENST00000398193 CASZ1Q86V15 1759 aa8.9□□□□□ -0.99
RGPD1-201ENST00000398193 ANKRD1Q15327 319 aa8.9□□□□□ -0.99
RGPD1-201ENST00000398193 CCDC158Q5M9N0 1113 aa8.9□□□□□ -0.99
RGPD1-201ENST00000398193 VPS53Q5VIR6 699 aa8.9□□□□□ -0.99
RGPD1-201ENST00000398193 CEP126Q9P2H0 1117 aa8.9□□□□□ -0.99
RGPD1-201ENST00000398193 RPAP1Q9BWH6 1393 aaPredicted RBP8.89□□□□□ -0.99
RGPD1-201ENST00000398193 DOCK2Q92608 1830 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 ZSCAN25Q6NSZ9 544 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 KBTBD3Q8NAB2 608 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 FSD1Q9BTV5 496 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 C4BP0C0L5 1744 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 NUTM2BA6NNL0 878 aaPredicted RBP8.89□□□□□ -0.99
RGPD1-201ENST00000398193 NUTM2EB1AL46 878 aaPredicted RBP8.89□□□□□ -0.99
RGPD1-201ENST00000398193 TTF1Q15361 905 aaPredicted RBP8.89□□□□□ -0.99
RGPD1-201ENST00000398193 NUTM2AQ8IVF1 878 aaPredicted RBP8.89□□□□□ -0.99
RGPD1-201ENST00000398193 SH2B1Q9NRF2 756 aaPredicted RBP8.89□□□□□ -0.99
RGPD1-201ENST00000398193 USP21Q9UK80 565 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 SNX14Q9Y5W7 946 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 IRS4O14654 1257 aaPredicted RBP8.89□□□□□ -0.99
RGPD1-201ENST00000398193 UQCRFS1P1P0C7P4 283 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 PIP4K2AP48426 406 aaPredicted RBP8.89□□□□□ -0.99
RGPD1-201ENST00000398193 TSHZ3Q63HK5 1081 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 NGLY1Q96IV0 654 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 DSCC1Q9BVC3 393 aa8.89□□□□□ -0.99
RGPD1-201ENST00000398193 ZKSCAN1P17029 563 aaPredicted RBP8.88□□□□□ -0.99
RGPD1-201ENST00000398193 NMIQ13287 307 aaPredicted RBP8.88□□□□□ -0.99
RGPD1-201ENST00000398193 NYXQ9GZU5 481 aa8.88□□□□□ -0.99
RGPD1-201ENST00000398193 CCDC8Q9H0W5 538 aaPredicted RBP8.88□□□□□ -0.99
RGPD1-201ENST00000398193 NECTIN1Q15223 517 aa8.88□□□□□ -0.99
RGPD1-201ENST00000398193 TTLL11Q8NHH1 800 aa8.88□□□□□ -0.99
RGPD1-201ENST00000398193 TTC14Q96N46 770 aa8.88□□□□□ -0.99
RGPD1-201ENST00000398193 CDC5LQ99459 802 aaKnown RBP8.88□□□□□ -0.99
RGPD1-201ENST00000398193 SIL1Q9H173 461 aa8.88□□□□□ -0.99
RGPD1-201ENST00000398193 ZSWIM6Q9HCJ5 1215 aa8.88□□□□□ -0.99
RGPD1-201ENST00000398193 RIPOR2Q9Y4F9 1068 aa8.88□□□□□ -0.99
RGPD1-201ENST00000398193 HSP90AA1P07900 732 aaKnown RBP8.88□□□□□ -0.99
RGPD1-201ENST00000398193 CCDC152Q4G0S7 254 aa8.88□□□□□ -0.99
RGPD1-201ENST00000398193 MCMDC2Q4G0Z9 681 aa8.88□□□□□ -0.99
RGPD1-201ENST00000398193 RGS22Q8NE09 1264 aa8.88□□□□□ -0.99
RGPD1-201ENST00000398193 ISY1Q9ULR0 285 aaKnown RBP8.88□□□□□ -0.99
RGPD1-201ENST00000398193 CCDC9Q9Y3X0 531 aaKnown RBP8.88□□□□□ -0.99
RGPD1-201ENST00000398193 CYP2E1P05181 493 aaPredicted RBP8.87□□□□□ -0.99
RGPD1-201ENST00000398193 HMGB1P09429 215 aaKnown RBP8.87□□□□□ -0.99
RGPD1-201ENST00000398193 HLFQ16534 295 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 SLC10A5Q5PT55 438 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 PAG1Q9NWQ8 432 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 TLR7Q9NYK1 1049 aaKnown RBP8.87□□□□□ -0.99
RGPD1-201ENST00000398193 TRMT112Q9UI30 125 aaKnown RBP8.87□□□□□ -0.99
RGPD1-201ENST00000398193 TRPC5Q9UL62 973 aaPredicted RBP8.87□□□□□ -0.99
RGPD1-201ENST00000398193 ZMYM6O95789 1325 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 C4AP0C0L4 1744 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 ARID4AP29374 1257 aaPredicted RBP8.87□□□□□ -0.99
RGPD1-201ENST00000398193 TAF7LQ5H9L4 462 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 CWC27Q6UX04 472 aaKnown RBP8.87□□□□□ -0.99
RGPD1-201ENST00000398193 MYH7P12883 1935 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 KIAA1551Q9HCM1 1747 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 UBN2Q6ZU65 1347 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms