RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 ZNF592Q92610 1267 aa20.43■□□□□ 0.86
EWSR1-206ENST00000397938 LTV1Q96GA3 475 aaPredicted RBP20.43■□□□□ 0.86
EWSR1-206ENST00000397938 DIP2AQ14689 1571 aa20.43■□□□□ 0.86
EWSR1-206ENST00000397938 TAF3Q5VWG9 929 aa20.42■□□□□ 0.86
EWSR1-206ENST00000397938 ZNF397Q8NF99 534 aaPredicted RBP20.42■□□□□ 0.86
EWSR1-206ENST00000397938 GTF3C6Q969F1 213 aa20.42■□□□□ 0.86
EWSR1-206ENST00000397938 EAF2Q96CJ1 260 aaPredicted RBP20.42■□□□□ 0.86
EWSR1-206ENST00000397938 USP27XA6NNY8 438 aa20.42■□□□□ 0.86
EWSR1-206ENST00000397938 JAK2O60674 1132 aa20.42■□□□□ 0.86
EWSR1-206ENST00000397938 SASH1O94885 1247 aa20.42■□□□□ 0.86
EWSR1-206ENST00000397938 C11orf57Q6ZUT1 292 aaPredicted RBP20.42■□□□□ 0.86
EWSR1-206ENST00000397938 BRF1Q92994 677 aa20.42■□□□□ 0.86
EWSR1-206ENST00000397938 FSD1Q9BTV5 496 aa20.42■□□□□ 0.86
EWSR1-206ENST00000397938 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
EWSR1-206ENST00000397938 HDAC5Q9UQL6 1122 aa20.41■□□□□ 0.86
EWSR1-206ENST00000397938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.41■□□□□ 0.86
EWSR1-206ENST00000397938 KCNQ3O43525 872 aa20.41■□□□□ 0.86
EWSR1-206ENST00000397938 ARID5BQ14865 1188 aa20.41■□□□□ 0.86
EWSR1-206ENST00000397938 TSPOAP1O95153 1857 aa20.41■□□□□ 0.86
EWSR1-206ENST00000397938 SLFN14P0C7P3 912 aa20.4■□□□□ 0.86
EWSR1-206ENST00000397938 PTPN14Q15678 1187 aa20.4■□□□□ 0.86
EWSR1-206ENST00000397938 STX1AQ16623 288 aa20.4■□□□□ 0.86
EWSR1-206ENST00000397938 CCDC8Q9H0W5 538 aaPredicted RBP20.4■□□□□ 0.86
EWSR1-206ENST00000397938 ZSCAN16Q9H4T2 348 aaPredicted RBP20.4■□□□□ 0.86
EWSR1-206ENST00000397938 CFAP45Q9UL16 551 aa20.4■□□□□ 0.86
EWSR1-206ENST00000397938 MAP3K2Q9Y2U5 619 aa20.4■□□□□ 0.86
EWSR1-206ENST00000397938 MYH15Q9Y2K3 1946 aa20.4■□□□□ 0.86
EWSR1-206ENST00000397938 ZNF589Q86UQ0 364 aaPredicted RBP20.4■□□□□ 0.86
EWSR1-206ENST00000397938 ESF1Q9H501 851 aaKnown RBP20.4■□□□□ 0.86
EWSR1-206ENST00000397938 LGR6Q9HBX8 967 aa20.4■□□□□ 0.86
EWSR1-206ENST00000397938 ZNF215Q9UL58 517 aaPredicted RBP20.4■□□□□ 0.86
EWSR1-206ENST00000397938 CTAGE5O15320 804 aa20.4■□□□□ 0.86
EWSR1-206ENST00000397938 TLR7Q9NYK1 1049 aaKnown RBP20.4■□□□□ 0.86
EWSR1-206ENST00000397938 SKILP12757 684 aa20.39■□□□□ 0.85
EWSR1-206ENST00000397938 KMT5BQ4FZB7 885 aa20.39■□□□□ 0.85
EWSR1-206ENST00000397938 BOLA2Q9H3K6 86 aa20.39■□□□□ 0.85
EWSR1-206ENST00000397938 DBF4Q9UBU7 674 aaPredicted RBP20.39■□□□□ 0.85
EWSR1-206ENST00000397938 SLIT1O75093 1534 aa20.39■□□□□ 0.85
EWSR1-206ENST00000397938 CCZ1BP86790 482 aa20.39■□□□□ 0.85
EWSR1-206ENST00000397938 CCZ1P86791 482 aaPredicted RBP20.39■□□□□ 0.85
EWSR1-206ENST00000397938 KRT222Q8N1A0 295 aa20.39■□□□□ 0.85
EWSR1-206ENST00000397938 LTKP29376 864 aa20.38■□□□□ 0.85
EWSR1-206ENST00000397938 G3BP1Q13283 466 aaKnown RBP eCLIP20.38■□□□□ 0.853e-7■■□□□ 11.5
EWSR1-206ENST00000397938 KRT32Q14532 448 aa20.38■□□□□ 0.85
EWSR1-206ENST00000397938 USPL1Q5W0Q7 1092 aa20.38■□□□□ 0.85
EWSR1-206ENST00000397938 CCDC69A6NI79 296 aa20.38■□□□□ 0.85
EWSR1-206ENST00000397938 H3BQV1 296 aa20.38■□□□□ 0.85
EWSR1-206ENST00000397938 IFFO2Q5TF58 517 aa20.38■□□□□ 0.85
EWSR1-206ENST00000397938 ERO1AQ96HE7 468 aa20.38■□□□□ 0.85
EWSR1-206ENST00000397938 TAF5LO75529 589 aa20.37■□□□□ 0.85
EWSR1-206ENST00000397938 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
EWSR1-206ENST00000397938 CWF19L2Q2TBE0 894 aaKnown RBP20.37■□□□□ 0.85
EWSR1-206ENST00000397938 NUTM2GQ5VZR2 741 aa20.37■□□□□ 0.85
EWSR1-206ENST00000397938 KSR2Q6VAB6 950 aa20.37■□□□□ 0.85
EWSR1-206ENST00000397938 DDX11Q96FC9 970 aa20.37■□□□□ 0.85
EWSR1-206ENST00000397938 KCND1Q9NSA2 647 aa20.37■□□□□ 0.85
EWSR1-206ENST00000397938 FAM53CQ9NYF3 392 aa20.37■□□□□ 0.85
EWSR1-206ENST00000397938 SUCLG2Q96I99 432 aa20.37■□□□□ 0.85
EWSR1-206ENST00000397938 USP16Q9Y5T5 823 aa20.37■□□□□ 0.85
EWSR1-206ENST00000397938 LMO7Q8WWI1 1683 aa20.36■□□□□ 0.85
EWSR1-206ENST00000397938 KAZALD1Q96I82 304 aa20.36■□□□□ 0.85
EWSR1-206ENST00000397938 ADD1P35611 737 aaKnown RBP20.36■□□□□ 0.85
EWSR1-206ENST00000397938 TERF2Q15554 542 aa20.36■□□□□ 0.85
EWSR1-206ENST00000397938 SLFNL1Q499Z3 407 aa20.36■□□□□ 0.85
EWSR1-206ENST00000397938 DHX40Q8IX18 779 aaKnown RBP20.36■□□□□ 0.85
EWSR1-206ENST00000397938 CCAR2Q8N163 923 aaKnown RBP20.36■□□□□ 0.85
EWSR1-206ENST00000397938 SLC26A8Q96RN1 970 aa20.36■□□□□ 0.85
EWSR1-206ENST00000397938 MRC1P22897 1456 aa20.35■□□□□ 0.85
EWSR1-206ENST00000397938 BTBD11A6QL63 1104 aa20.35■□□□□ 0.85
EWSR1-206ENST00000397938 CCAR1Q8IX12 1150 aaKnown RBP20.35■□□□□ 0.85
EWSR1-206ENST00000397938 NEK1Q96PY6 1258 aa20.35■□□□□ 0.85
EWSR1-206ENST00000397938 UTYO14607 1347 aa20.35■□□□□ 0.85
EWSR1-206ENST00000397938 ERBB3P21860 1342 aa20.35■□□□□ 0.85
EWSR1-206ENST00000397938 BECN2A8MW95 431 aa20.35■□□□□ 0.85
EWSR1-206ENST00000397938 GRM8O00222 908 aa20.35■□□□□ 0.85
EWSR1-206ENST00000397938 GOLPH3LQ9H4A5 285 aa20.35■□□□□ 0.85
EWSR1-206ENST00000397938 BICC1Q9H694 974 aaKnown RBP20.35■□□□□ 0.85
EWSR1-206ENST00000397938 RCOR1Q9UKL0 485 aa20.35■□□□□ 0.85
EWSR1-206ENST00000397938 AMOTL2Q9Y2J4 779 aa20.35■□□□□ 0.85
EWSR1-206ENST00000397938 LTN1O94822 1766 aa20.34■□□□□ 0.85
EWSR1-206ENST00000397938 TEFQ10587 303 aa20.34■□□□□ 0.85
EWSR1-206ENST00000397938 PROSER3Q2NL68 480 aa20.34■□□□□ 0.85
EWSR1-206ENST00000397938 FBXO38Q6PIJ6 1188 aa20.34■□□□□ 0.85
EWSR1-206ENST00000397938 FILIP1Q7Z7B0 1213 aa20.34■□□□□ 0.85
EWSR1-206ENST00000397938 SMARCC2Q8TAQ2 1214 aa20.34■□□□□ 0.85
EWSR1-206ENST00000397938 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.34■□□□□ 0.853e-13■□□□□ 9.4
EWSR1-206ENST00000397938 V9GYY5 206 aaPredicted RBP20.34■□□□□ 0.85
EWSR1-206ENST00000397938 COL15A1P39059 1388 aa20.34■□□□□ 0.85
EWSR1-206ENST00000397938 A0A0U1RQG5 324 aaPredicted RBP20.34■□□□□ 0.85
EWSR1-206ENST00000397938 ELF2Q15723 593 aa20.34■□□□□ 0.85
EWSR1-206ENST00000397938 Q6ZUG5 572 aa20.34■□□□□ 0.85
EWSR1-206ENST00000397938 BCL11BQ9C0K0 894 aaPredicted RBP20.34■□□□□ 0.85
EWSR1-206ENST00000397938 ANO10Q9NW15 660 aa20.34■□□□□ 0.85
EWSR1-206ENST00000397938 HSP90B1P14625 803 aaKnown RBP20.33■□□□□ 0.85
EWSR1-206ENST00000397938 CEBPZQ03701 1054 aaKnown RBP20.33■□□□□ 0.85
EWSR1-206ENST00000397938 SNW1Q13573 536 aaKnown RBP20.33■□□□□ 0.85
EWSR1-206ENST00000397938 SLU7O95391 586 aaKnown RBP20.33■□□□□ 0.84
EWSR1-206ENST00000397938 LINS1Q8NG48 757 aa20.33■□□□□ 0.84
EWSR1-206ENST00000397938 TRMT1Q9NXH9 659 aaKnown RBP20.33■□□□□ 0.84
EWSR1-206ENST00000397938 KIF2AO00139 706 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms