RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 C4AP0C0L4 1744 aa23.79■■□□□ 1.4
PDLIM2-204ENST00000397760 HSP90B1P14625 803 aaKnown RBP23.79■■□□□ 1.4
PDLIM2-204ENST00000397760 DEFB132Q7Z7B7 95 aa23.79■■□□□ 1.4
PDLIM2-204ENST00000397760 FLAD1Q8NFF5 587 aa23.79■■□□□ 1.4
PDLIM2-204ENST00000397760 TTLL11Q8NHH1 800 aa23.79■■□□□ 1.4
PDLIM2-204ENST00000397760 CCDC85AQ96PX6 553 aaPredicted RBP23.79■■□□□ 1.4
PDLIM2-204ENST00000397760 NYXQ9GZU5 481 aa23.79■■□□□ 1.4
PDLIM2-204ENST00000397760 CCDC57Q2TAC2 916 aa23.78■■□□□ 1.4
PDLIM2-204ENST00000397760 ERC1Q8IUD2 1116 aa23.78■■□□□ 1.4
PDLIM2-204ENST00000397760 GTF2E1P29083 439 aaPredicted RBP23.77■■□□□ 1.4
PDLIM2-204ENST00000397760 NFIXQ14938 502 aa23.77■■□□□ 1.4
PDLIM2-204ENST00000397760 NBPF5PQ86XG9 351 aaPredicted RBP23.77■■□□□ 1.4
PDLIM2-204ENST00000397760 ERFEQ4G0M1 354 aa23.77■■□□□ 1.4
PDLIM2-204ENST00000397760 COL23A1Q86Y22 540 aaPredicted RBP23.77■■□□□ 1.4
PDLIM2-204ENST00000397760 IL1RAPL2Q9NP60 686 aa23.77■■□□□ 1.4
PDLIM2-204ENST00000397760 IFIT5Q13325 482 aaKnown RBP23.76■■□□□ 1.39
PDLIM2-204ENST00000397760 TPTE2Q6XPS3 522 aa23.75■■□□□ 1.39
PDLIM2-204ENST00000397760 CCDC125Q86Z20 511 aa23.75■■□□□ 1.39
PDLIM2-204ENST00000397760 GREM2Q9H772 168 aa23.75■■□□□ 1.39
PDLIM2-204ENST00000397760 PLEKHM2Q8IWE5 1019 aa23.75■■□□□ 1.39
PDLIM2-204ENST00000397760 OTUD7AQ8TE49 926 aaPredicted RBP23.75■■□□□ 1.39
PDLIM2-204ENST00000397760 ANO8Q9HCE9 1232 aaPredicted RBP23.75■■□□□ 1.39
PDLIM2-204ENST00000397760 STK32BQ9NY57 414 aa23.75■■□□□ 1.39
PDLIM2-204ENST00000397760 CARMIL3Q8ND23 1372 aa23.74■■□□□ 1.39
PDLIM2-204ENST00000397760 SASH1O94885 1247 aa23.74■■□□□ 1.39
PDLIM2-204ENST00000397760 SLC15A2Q16348 729 aa23.74■■□□□ 1.39
PDLIM2-204ENST00000397760 ZNF594Q96JF6 807 aaPredicted RBP23.74■■□□□ 1.39
PDLIM2-204ENST00000397760 ITGA6P23229 1130 aa23.73■■□□□ 1.39
PDLIM2-204ENST00000397760 PNPLA7Q6ZV29 1317 aa23.73■■□□□ 1.39
PDLIM2-204ENST00000397760 TAF7LQ5H9L4 462 aa23.73■■□□□ 1.39
PDLIM2-204ENST00000397760 SLC10A5Q5PT55 438 aa23.73■■□□□ 1.39
PDLIM2-204ENST00000397760 UPF2Q9HAU5 1272 aaKnown RBP23.73■■□□□ 1.39
PDLIM2-204ENST00000397760 ANKRD18BA2A2Z9 1011 aa23.72■■□□□ 1.39
PDLIM2-204ENST00000397760 TM4SF1P30408 202 aa23.72■■□□□ 1.39
PDLIM2-204ENST00000397760 NPHP1O15259 732 aa23.71■■□□□ 1.39
PDLIM2-204ENST00000397760 BECN1Q14457 450 aa23.71■■□□□ 1.39
PDLIM2-204ENST00000397760 CCDC152Q4G0S7 254 aa23.71■■□□□ 1.39
PDLIM2-204ENST00000397760 CLASRPQ8N2M8 674 aaKnown RBP23.71■■□□□ 1.39
PDLIM2-204ENST00000397760 NFKBIBQ15653 356 aa23.7■■□□□ 1.39
PDLIM2-204ENST00000397760 EYA2O00167 538 aa23.7■■□□□ 1.38
PDLIM2-204ENST00000397760 ATG9AQ7Z3C6 839 aa23.7■■□□□ 1.38
PDLIM2-204ENST00000397760 NLGN1Q8N2Q7 840 aa23.7■■□□□ 1.38
PDLIM2-204ENST00000397760 ABCC12Q96J65 1359 aa23.7■■□□□ 1.38
PDLIM2-204ENST00000397760 COL24A1Q17RW2 1714 aa23.69■■□□□ 1.38
PDLIM2-204ENST00000397760 CIAO1O76071 339 aa23.69■■□□□ 1.38
PDLIM2-204ENST00000397760 IL15P40933 162 aaPredicted RBP23.69■■□□□ 1.38
PDLIM2-204ENST00000397760 LRRC24Q50LG9 513 aa23.69■■□□□ 1.38
PDLIM2-204ENST00000397760 PUS3Q9BZE2 481 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-204ENST00000397760 FBXO3Q9UK99 471 aa23.69■■□□□ 1.38
PDLIM2-204ENST00000397760 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.69■■□□□ 1.38
PDLIM2-204ENST00000397760 SALL3Q9BXA9 1300 aa23.68■■□□□ 1.38
PDLIM2-204ENST00000397760 CCDC24Q8N4L8 307 aa23.68■■□□□ 1.38
PDLIM2-204ENST00000397760 CNBD1Q8NA66 436 aa23.68■■□□□ 1.38
PDLIM2-204ENST00000397760 SERPINB2P05120 415 aa23.68■■□□□ 1.38
PDLIM2-204ENST00000397760 PDE1AP54750 535 aa23.68■■□□□ 1.38
PDLIM2-204ENST00000397760 TFCP2Q12800 502 aa23.68■■□□□ 1.38
PDLIM2-204ENST00000397760 SF3B3Q15393 1217 aaKnown RBP23.68■■□□□ 1.38
PDLIM2-204ENST00000397760 C3orf67Q6ZVT6 689 aa23.68■■□□□ 1.38
PDLIM2-204ENST00000397760 NLRP3Q96P20 1036 aa23.68■■□□□ 1.38
PDLIM2-204ENST00000397760 MX1P20591 662 aa23.67■■□□□ 1.38
PDLIM2-204ENST00000397760 DDR1Q08345 913 aa23.66■■□□□ 1.38
PDLIM2-204ENST00000397760 LDHAL6AQ6ZMR3 332 aa23.66■■□□□ 1.38
PDLIM2-204ENST00000397760 OSBPL3Q9H4L5 887 aa23.66■■□□□ 1.38
PDLIM2-204ENST00000397760 DDX60Q8IY21 1712 aaKnown RBP23.66■■□□□ 1.38
PDLIM2-204ENST00000397760 RTL9Q8NET4 1388 aa23.66■■□□□ 1.38
PDLIM2-204ENST00000397760 POLRMTO00411 1230 aaKnown RBP23.66■■□□□ 1.38
PDLIM2-204ENST00000397760 IFIT2P09913 472 aaKnown RBP23.66■■□□□ 1.38
PDLIM2-204ENST00000397760 SLC4A3P48751 1232 aa23.66■■□□□ 1.38
PDLIM2-204ENST00000397760 AACSQ86V21 672 aa23.66■■□□□ 1.38
PDLIM2-204ENST00000397760 SEC31BQ9NQW1 1179 aa23.66■■□□□ 1.38
PDLIM2-204ENST00000397760 TUBGCP6Q96RT7 1819 aa23.65■■□□□ 1.38
PDLIM2-204ENST00000397760 PRR5LQ6MZQ0 368 aa23.65■■□□□ 1.38
PDLIM2-204ENST00000397760 EAF2Q96CJ1 260 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-204ENST00000397760 TBC1D32Q96NH3 1257 aa23.65■■□□□ 1.38
PDLIM2-204ENST00000397760 STAP2Q9UGK3 403 aa23.65■■□□□ 1.38
PDLIM2-204ENST00000397760 MYH3P11055 1940 aa23.65■■□□□ 1.38
PDLIM2-204ENST00000397760 BMP2KLQ5H9B9 411 aa23.64■■□□□ 1.38
PDLIM2-204ENST00000397760 LAMB2P55268 1798 aa23.64■■□□□ 1.37
PDLIM2-204ENST00000397760 TTC22Q5TAA0 569 aa23.63■■□□□ 1.37
PDLIM2-204ENST00000397760 TSHZ3Q63HK5 1081 aa23.63■■□□□ 1.37
PDLIM2-204ENST00000397760 CNNM1Q9NRU3 951 aa23.63■■□□□ 1.37
PDLIM2-204ENST00000397760 SEC24BO95487 1268 aa23.63■■□□□ 1.37
PDLIM2-204ENST00000397760 ST5P78524 1137 aa23.63■■□□□ 1.37
PDLIM2-204ENST00000397760 TNNI3KQ59H18 835 aa23.63■■□□□ 1.37
PDLIM2-204ENST00000397760 CEP126Q9P2H0 1117 aa23.63■■□□□ 1.37
PDLIM2-204ENST00000397760 RIPOR2Q9Y4F9 1068 aa23.63■■□□□ 1.37
PDLIM2-204ENST00000397760 FPGT-TNNI3KV9GXZ4 949 aa23.63■■□□□ 1.37
PDLIM2-204ENST00000397760 GSPT1P15170 499 aaKnown RBP23.62■■□□□ 1.37
PDLIM2-204ENST00000397760 CCDC8Q9H0W5 538 aaPredicted RBP23.62■■□□□ 1.37
PDLIM2-204ENST00000397760 MSL1Q68DK7 614 aa23.61■■□□□ 1.37
PDLIM2-204ENST00000397760 CDC5LQ99459 802 aaKnown RBP23.61■■□□□ 1.37
PDLIM2-204ENST00000397760 AOX1Q06278 1338 aa23.61■■□□□ 1.37
PDLIM2-204ENST00000397760 IGHMBP2P38935 993 aaKnown RBP23.61■■□□□ 1.37
PDLIM2-204ENST00000397760 MPHOSPH8Q99549 860 aa23.61■■□□□ 1.37
PDLIM2-204ENST00000397760 GPR108Q9NPR9 543 aa23.61■■□□□ 1.37
PDLIM2-204ENST00000397760 MMP10P09238 476 aa23.6■■□□□ 1.37
PDLIM2-204ENST00000397760 METTL24Q5JXM2 366 aa23.59■■□□□ 1.37
PDLIM2-204ENST00000397760 GPATCH3Q96I76 525 aa23.59■■□□□ 1.37
PDLIM2-204ENST00000397760 TLR7Q9NYK1 1049 aaKnown RBP23.59■■□□□ 1.37
PDLIM2-204ENST00000397760 PARP3Q9Y6F1 533 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms