RNA–Protein interactions for RNA: ENST00000397468.5

RFPL3-202, Transcript of ret finger protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFPL3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-202ENST00000397468 CLCN6P51797 869 aa12.62□□□□□ -0.39
RFPL3-202ENST00000397468 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
RFPL3-202ENST00000397468 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
RFPL3-202ENST00000397468 SUPT20HQ8NEM7 779 aa12.62□□□□□ -0.39
RFPL3-202ENST00000397468 ABCC4O15439 1325 aa12.62□□□□□ -0.39
RFPL3-202ENST00000397468 PDIA6Q15084 440 aa12.61□□□□□ -0.39
RFPL3-202ENST00000397468 AOC3Q16853 763 aa12.61□□□□□ -0.39
RFPL3-202ENST00000397468 MAP1SQ66K74 1059 aaPredicted RBP12.61□□□□□ -0.39
RFPL3-202ENST00000397468 DPP8Q6V1X1 898 aaPredicted RBP12.61□□□□□ -0.39
RFPL3-202ENST00000397468 ZNF428Q96B54 188 aa12.61□□□□□ -0.39
RFPL3-202ENST00000397468 ABT1Q9ULW3 272 aaKnown RBP12.61□□□□□ -0.39
RFPL3-202ENST00000397468 SH3TC1Q8TE82 1336 aa12.61□□□□□ -0.39
RFPL3-202ENST00000397468 CNTNAP1P78357 1384 aa12.6□□□□□ -0.39
RFPL3-202ENST00000397468 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
RFPL3-202ENST00000397468 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
RFPL3-202ENST00000397468 CNTROBQ8N137 903 aa12.6□□□□□ -0.39
RFPL3-202ENST00000397468 DDX21Q9NR30 783 aaKnown RBP eCLIP12.6□□□□□ -0.39
RFPL3-202ENST00000397468 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
RFPL3-202ENST00000397468 ADAMTSL1Q8N6G6 1762 aa12.6□□□□□ -0.39
RFPL3-202ENST00000397468 PASKQ96RG2 1323 aa12.6□□□□□ -0.39
RFPL3-202ENST00000397468 TAF1P21675 1872 aa12.59□□□□□ -0.39
RFPL3-202ENST00000397468 TRPM7Q96QT4 1865 aa12.59□□□□□ -0.39
RFPL3-202ENST00000397468 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
RFPL3-202ENST00000397468 KRT24Q2M2I5 525 aa12.59□□□□□ -0.39
RFPL3-202ENST00000397468 NLRP10Q86W26 655 aa12.59□□□□□ -0.39
RFPL3-202ENST00000397468 MPNDQ8N594 471 aa12.59□□□□□ -0.39
RFPL3-202ENST00000397468 DBF4Q9UBU7 674 aaPredicted RBP12.59□□□□□ -0.39
RFPL3-202ENST00000397468 ATP6V0A2Q9Y487 856 aa12.59□□□□□ -0.39
RFPL3-202ENST00000397468 COL4A5P29400 1685 aa12.58□□□□□ -0.4
RFPL3-202ENST00000397468 CHL1O00533 1208 aa12.58□□□□□ -0.4
RFPL3-202ENST00000397468 GRM1Q13255 1194 aa12.58□□□□□ -0.4
RFPL3-202ENST00000397468 LRP10Q7Z4F1 713 aa12.58□□□□□ -0.4
RFPL3-202ENST00000397468 SNED1Q8TER0 1413 aa12.58□□□□□ -0.4
RFPL3-202ENST00000397468 BCL2L13Q9BXK5 485 aa12.58□□□□□ -0.4
RFPL3-202ENST00000397468 ADAMTS8Q9UP79 889 aa12.58□□□□□ -0.4
RFPL3-202ENST00000397468 LTBP1Q14766 1721 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 DDX60Q8IY21 1712 aaKnown RBP12.57□□□□□ -0.4
RFPL3-202ENST00000397468 BBOX1O75936 387 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 HOXB7P09629 217 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 EPS15P42566 896 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 CALD1Q05682 793 aaKnown RBP12.57□□□□□ -0.4
RFPL3-202ENST00000397468 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 GRAPQ13588 217 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 DEFB115Q30KQ5 88 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 SLC51AQ86UW1 340 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 PLBD2Q8NHP8 589 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 GRAPLQ8TC17 118 aaPredicted RBP12.57□□□□□ -0.4
RFPL3-202ENST00000397468 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
RFPL3-202ENST00000397468 ATP5J2-PTCD1G3V325 749 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 ITGBL1O95965 494 aaPredicted RBP12.56□□□□□ -0.4
RFPL3-202ENST00000397468 VEGFBP49765 207 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 SCNN1DP51172 638 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 RTL5Q5HYW3 569 aaPredicted RBP12.56□□□□□ -0.4
RFPL3-202ENST00000397468 DUSP27Q5VZP5 1158 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 CIAPIN1Q6FI81 312 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 USP50Q70EL3 339 aaPredicted RBP12.56□□□□□ -0.4
RFPL3-202ENST00000397468 TMC4Q7Z404 712 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 ZNRF3Q9ULT6 936 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 TRIM35Q9UPQ4 493 aa12.56□□□□□ -0.4
RFPL3-202ENST00000397468 TNIP1Q15025 636 aa12.55□□□□□ -0.4
RFPL3-202ENST00000397468 SP8Q8IXZ3 490 aa12.55□□□□□ -0.4
RFPL3-202ENST00000397468 BEGAINQ9BUH8 593 aa12.55□□□□□ -0.4
RFPL3-202ENST00000397468 ADARB2Q9NS39 739 aaKnown RBP12.55□□□□□ -0.4
RFPL3-202ENST00000397468 G3V3G9 751 aa12.54□□□□□ -0.4
RFPL3-202ENST00000397468 RAD17O75943 681 aa12.54□□□□□ -0.4
RFPL3-202ENST00000397468 HSP90B1P14625 803 aaKnown RBP12.54□□□□□ -0.4
RFPL3-202ENST00000397468 GNAI1P63096 354 aa12.54□□□□□ -0.4
RFPL3-202ENST00000397468 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
RFPL3-202ENST00000397468 FAM89AQ96GI7 184 aa12.54□□□□□ -0.4
RFPL3-202ENST00000397468 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
RFPL3-202ENST00000397468 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
RFPL3-202ENST00000397468 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
RFPL3-202ENST00000397468 ELL2O00472 640 aaPredicted RBP12.53□□□□□ -0.4
RFPL3-202ENST00000397468 FOXN1O15353 648 aa12.53□□□□□ -0.4
RFPL3-202ENST00000397468 ECE1P42892 770 aa12.53□□□□□ -0.4
RFPL3-202ENST00000397468 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
RFPL3-202ENST00000397468 GMPSP49915 693 aaPredicted RBP12.53□□□□□ -0.4
RFPL3-202ENST00000397468 CXCL9Q07325 125 aa12.53□□□□□ -0.4
RFPL3-202ENST00000397468 KIAA2012Q0VF49 1180 aa12.53□□□□□ -0.4
RFPL3-202ENST00000397468 RTFDC1Q9BY42 306 aaPredicted RBP12.53□□□□□ -0.4
RFPL3-202ENST00000397468 PRKRIP1Q9H875 184 aaPredicted RBP12.53□□□□□ -0.4
RFPL3-202ENST00000397468 ZNF408Q9H9D4 720 aa12.53□□□□□ -0.4
RFPL3-202ENST00000397468 GPRC5DQ9NZD1 345 aa12.53□□□□□ -0.4
RFPL3-202ENST00000397468 NSFL1CQ9UNZ2 370 aaKnown RBP12.53□□□□□ -0.4
RFPL3-202ENST00000397468 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
RFPL3-202ENST00000397468 RASSF10A6NK89 507 aa12.52□□□□□ -0.41
RFPL3-202ENST00000397468 IRS4O14654 1257 aaPredicted RBP12.52□□□□□ -0.41
RFPL3-202ENST00000397468 APAF1O14727 1248 aa12.52□□□□□ -0.41
RFPL3-202ENST00000397468 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
RFPL3-202ENST00000397468 MAP2K1Q02750 393 aaPredicted RBP12.52□□□□□ -0.41
RFPL3-202ENST00000397468 WASHC4Q2M389 1173 aa12.52□□□□□ -0.41
RFPL3-202ENST00000397468 EYA3Q99504 573 aa12.52□□□□□ -0.41
RFPL3-202ENST00000397468 CHMP4AQ9BY43 222 aa12.52□□□□□ -0.41
RFPL3-202ENST00000397468 IFT57Q9NWB7 429 aa12.52□□□□□ -0.41
RFPL3-202ENST00000397468 H7C1D1 291 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms