RNA–Protein interactions for RNA: ENST00000397289.6

APOL3-204, Transcript of apolipoprotein L3, humanhuman

TSL 1 (best)

Gene APOL3, Length 2,214 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL3-204ENST00000397289 USP44Q9H0E7 712 aa14.08□□□□□ -0.16
APOL3-204ENST00000397289 STAG3Q9UJ98 1225 aa14.08□□□□□ -0.16
APOL3-204ENST00000397289 RAPGEF3O95398 923 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 CALRP27797 417 aaKnown RBP14.07□□□□□ -0.16
APOL3-204ENST00000397289 OS9Q13438 667 aaPredicted RBP14.07□□□□□ -0.16
APOL3-204ENST00000397289 SART3Q15020 963 aaKnown RBP14.07□□□□□ -0.16
APOL3-204ENST00000397289 CCDC144BQ3MJ40 725 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 NOM1Q5C9Z4 860 aaKnown RBP14.07□□□□□ -0.16
APOL3-204ENST00000397289 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 CCDC144CPQ8IYA2 1237 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 NUDT16Q96DE0 195 aaKnown RBP14.07□□□□□ -0.16
APOL3-204ENST00000397289 CYP46A1Q9Y6A2 500 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 RIMBP3CA6NJZ7 1639 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 RIMBP3BA6NNM3 1639 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 RIMBP3Q9UFD9 1639 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 ELP1O95163 1332 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 N4BP2Q86UW6 1770 aaPredicted RBP14.07□□□□□ -0.16
APOL3-204ENST00000397289 HMGB1P09429 215 aaKnown RBP14.07□□□□□ -0.16
APOL3-204ENST00000397289 ATP6V1AP38606 617 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 HSP90AB2PQ58FF8 381 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 TEX35Q5T0J7 233 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 NBPF6Q5VWK0 638 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 PRPF40BQ6NWY9 871 aaKnown RBP14.07□□□□□ -0.16
APOL3-204ENST00000397289 RPAINQ86UA6 219 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 NBPF5PQ86XG9 351 aaPredicted RBP14.07□□□□□ -0.16
APOL3-204ENST00000397289 RHPN1Q8TCX5 695 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 DDX54Q8TDD1 881 aaKnown RBP14.07□□□□□ -0.16
APOL3-204ENST00000397289 SSH3Q8TE77 659 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 NBPF4Q96M43 638 aa14.07□□□□□ -0.16
APOL3-204ENST00000397289 RAB11FIP3O75154 756 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 ZNF165P49910 485 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 PTH1RQ03431 593 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 BMS1Q14692 1282 aaKnown RBP14.06□□□□□ -0.16
APOL3-204ENST00000397289 CCDC30Q5VVM6 783 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 PACS2Q86VP3 889 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 CCDC191Q8NCU4 936 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 NEK11Q8NG66 645 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 TDRD7Q8NHU6 1098 aaKnown RBP14.06□□□□□ -0.16
APOL3-204ENST00000397289 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.06□□□□□ -0.16
APOL3-204ENST00000397289 RRP15Q9Y3B9 282 aaKnown RBP14.06□□□□□ -0.16
APOL3-204ENST00000397289 V9GYY5 206 aaPredicted RBP14.06□□□□□ -0.16
APOL3-204ENST00000397289 RGPD1P0DJD0 1748 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 MTHFSDQ2M296 383 aaKnown RBP14.06□□□□□ -0.16
APOL3-204ENST00000397289 FBXO31Q5XUX0 539 aaPredicted RBP14.06□□□□□ -0.16
APOL3-204ENST00000397289 MCTP2Q6DN12 878 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 PPP1R42Q7Z4L9 355 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 JMYQ8N9B5 988 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 SPATA32Q96LK8 384 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 DNAJC25Q9H1X3 360 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 TFIP11Q9UBB9 837 aaKnown RBP14.06□□□□□ -0.16
APOL3-204ENST00000397289 CHD2O14647 1828 aaKnown RBP14.06□□□□□ -0.16
APOL3-204ENST00000397289 DIP2CQ9Y2E4 1556 aa14.06□□□□□ -0.16
APOL3-204ENST00000397289 NEO1Q92859 1461 aa14.05□□□□□ -0.16
APOL3-204ENST00000397289 KLHL33A6NCF5 533 aa14.05□□□□□ -0.16
APOL3-204ENST00000397289 MAGEA9P43362 315 aa14.05□□□□□ -0.16
APOL3-204ENST00000397289 ZSCAN26Q16670 478 aa14.05□□□□□ -0.16
APOL3-204ENST00000397289 ZNF215Q9UL58 517 aaPredicted RBP14.05□□□□□ -0.16
APOL3-204ENST00000397289 TTC21AQ8NDW8 1320 aa14.05□□□□□ -0.16
APOL3-204ENST00000397289 SETD1AO15047 1707 aaKnown RBP14.05□□□□□ -0.16
APOL3-204ENST00000397289 USP27XA6NNY8 438 aa14.05□□□□□ -0.16
APOL3-204ENST00000397289 FBXO38Q6PIJ6 1188 aa14.05□□□□□ -0.16
APOL3-204ENST00000397289 CEP89Q96ST8 783 aa14.05□□□□□ -0.16
APOL3-204ENST00000397289 CLSTN2Q9H4D0 955 aa14.05□□□□□ -0.16
APOL3-204ENST00000397289 DDX19AQ9NUU7 478 aaKnown RBP14.05□□□□□ -0.16
APOL3-204ENST00000397289 CCDC61Q9Y6R9 512 aa14.05□□□□□ -0.16
APOL3-204ENST00000397289 PEAK1Q9H792 1746 aa14.04□□□□□ -0.16
APOL3-204ENST00000397289 PTPN14Q15678 1187 aa14.04□□□□□ -0.16
APOL3-204ENST00000397289 RBM43Q6ZSC3 357 aaKnown RBP14.04□□□□□ -0.16
APOL3-204ENST00000397289 LRRC8AQ8IWT6 810 aa14.04□□□□□ -0.16
APOL3-204ENST00000397289 OTUD6BQ8N6M0 293 aa14.04□□□□□ -0.16
APOL3-204ENST00000397289 IQUBQ8NA54 791 aa14.04□□□□□ -0.16
APOL3-204ENST00000397289 SCAND2PQ9GZW5 306 aaPredicted RBP14.04□□□□□ -0.16
APOL3-204ENST00000397289 TPCN1Q9ULQ1 816 aa14.04□□□□□ -0.16
APOL3-204ENST00000397289 CCDC171Q6TFL3 1326 aa14.04□□□□□ -0.16
APOL3-204ENST00000397289 NPHP3Q7Z494 1330 aa14.04□□□□□ -0.16
APOL3-204ENST00000397289 CRYBG1Q9Y4K1 1723 aa14.04□□□□□ -0.16
APOL3-204ENST00000397289 CCDC196A0A1B0GTZ2 297 aa14.03□□□□□ -0.16
APOL3-204ENST00000397289 NR1I2O75469 434 aa14.03□□□□□ -0.16
APOL3-204ENST00000397289 ARID5BQ14865 1188 aa14.03□□□□□ -0.16
APOL3-204ENST00000397289 RUFY2Q8WXA3 655 aa14.03□□□□□ -0.16
APOL3-204ENST00000397289 TM6SF1Q9BZW5 370 aa14.03□□□□□ -0.16
APOL3-204ENST00000397289 SRGAP3O43295 1099 aa14.03□□□□□ -0.16
APOL3-204ENST00000397289 BORCS6Q96GS4 357 aa14.03□□□□□ -0.16
APOL3-204ENST00000397289 MAP3K19Q56UN5 1328 aa14.02□□□□□ -0.16
APOL3-204ENST00000397289 PDCP20941 246 aa14.02□□□□□ -0.16
APOL3-204ENST00000397289 CDC25BP30305 580 aa14.02□□□□□ -0.16
APOL3-204ENST00000397289 POLA2Q14181 598 aa14.02□□□□□ -0.16
APOL3-204ENST00000397289 FBXO18Q8NFZ0 1043 aa14.02□□□□□ -0.16
APOL3-204ENST00000397289 GOLGA5Q8TBA6 731 aa14.02□□□□□ -0.16
APOL3-204ENST00000397289 ITFG2Q969R8 447 aa14.02□□□□□ -0.16
APOL3-204ENST00000397289 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.16
APOL3-204ENST00000397289 ZKSCAN1P17029 563 aaPredicted RBP14.02□□□□□ -0.17
APOL3-204ENST00000397289 MAP2K2P36507 400 aa14.02□□□□□ -0.17
APOL3-204ENST00000397289 TPM4P67936 248 aa14.02□□□□□ -0.17
APOL3-204ENST00000397289 ELF2Q15723 593 aa14.02□□□□□ -0.17
APOL3-204ENST00000397289 RNF20Q5VTR2 975 aa14.02□□□□□ -0.17
APOL3-204ENST00000397289 NYAP1Q6ZVC0 841 aa14.02□□□□□ -0.17
APOL3-204ENST00000397289 BICD2Q8TD16 824 aa14.02□□□□□ -0.17
APOL3-204ENST00000397289 LEO1Q8WVC0 666 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms