RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 TMX4Q9H1E5 349 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-206ENST00000397021 SMC4Q9NTJ3 1288 aa12.31□□□□□ -0.44
MCF2L-206ENST00000397021 SNED1Q8TER0 1413 aa12.3□□□□□ -0.44
MCF2L-206ENST00000397021 KIF3CO14782 793 aa12.3□□□□□ -0.44
MCF2L-206ENST00000397021 CTSWP56202 376 aa12.3□□□□□ -0.44
MCF2L-206ENST00000397021 CCDC152Q4G0S7 254 aa12.3□□□□□ -0.44
MCF2L-206ENST00000397021 SP8Q8IXZ3 490 aa12.3□□□□□ -0.44
MCF2L-206ENST00000397021 PSMD1Q99460 953 aa12.3□□□□□ -0.44
MCF2L-206ENST00000397021 RRAGCQ9HB90 399 aa12.3□□□□□ -0.44
MCF2L-206ENST00000397021 CDHR2Q9BYE9 1310 aa12.3□□□□□ -0.44
MCF2L-206ENST00000397021 COL4A1P02462 1669 aa12.29□□□□□ -0.44
MCF2L-206ENST00000397021 GLTPD2A6NH11 291 aa12.29□□□□□ -0.44
MCF2L-206ENST00000397021 HSP90B1P14625 803 aaKnown RBP12.29□□□□□ -0.44
MCF2L-206ENST00000397021 CASP7P55210 303 aa12.29□□□□□ -0.44
MCF2L-206ENST00000397021 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
MCF2L-206ENST00000397021 DPP8Q6V1X1 898 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-206ENST00000397021 MPNDQ8N594 471 aa12.29□□□□□ -0.44
MCF2L-206ENST00000397021 TTLL11Q8NHH1 800 aa12.29□□□□□ -0.44
MCF2L-206ENST00000397021 GREM2Q9H772 168 aa12.29□□□□□ -0.44
MCF2L-206ENST00000397021 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
MCF2L-206ENST00000397021 DDNO94850 711 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-206ENST00000397021 C1QTNF8P60827 252 aa12.28□□□□□ -0.44
MCF2L-206ENST00000397021 GPSM2P81274 684 aa12.28□□□□□ -0.44
MCF2L-206ENST00000397021 AOC3Q16853 763 aa12.28□□□□□ -0.44
MCF2L-206ENST00000397021 ALDH1L2Q3SY69 923 aa12.28□□□□□ -0.44
MCF2L-206ENST00000397021 LARGE2Q8N3Y3 721 aa12.28□□□□□ -0.44
MCF2L-206ENST00000397021 GPR101Q96P66 508 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-206ENST00000397021 SRCIN1Q9C0H9 1055 aa12.28□□□□□ -0.44
MCF2L-206ENST00000397021 NSFL1CQ9UNZ2 370 aaKnown RBP12.28□□□□□ -0.44
MCF2L-206ENST00000397021 ZNF541Q9H0D2 1346 aa12.28□□□□□ -0.44
MCF2L-206ENST00000397021 CACNA1SQ13698 1873 aa12.27□□□□□ -0.44
MCF2L-206ENST00000397021 PPIP5K2O43314 1243 aa12.27□□□□□ -0.45
MCF2L-206ENST00000397021 DPY19L2Q6NUT2 758 aa12.27□□□□□ -0.45
MCF2L-206ENST00000397021 NOB1Q9ULX3 412 aaKnown RBP12.27□□□□□ -0.45
MCF2L-206ENST00000397021 DDX60Q8IY21 1712 aaKnown RBP12.27□□□□□ -0.45
MCF2L-206ENST00000397021 ZC3H4Q9UPT8 1303 aaKnown RBP12.27□□□□□ -0.45
MCF2L-206ENST00000397021 GRM8O00222 908 aa12.26□□□□□ -0.45
MCF2L-206ENST00000397021 ALDH1L1O75891 902 aa12.26□□□□□ -0.45
MCF2L-206ENST00000397021 RARSP54136 660 aaKnown RBP12.26□□□□□ -0.45
MCF2L-206ENST00000397021 FAM161AQ3B820 660 aa12.26□□□□□ -0.45
MCF2L-206ENST00000397021 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
MCF2L-206ENST00000397021 EPHA10Q5JZY3 1008 aa12.26□□□□□ -0.45
MCF2L-206ENST00000397021 ANKRD18AQ8IVF6 992 aa12.26□□□□□ -0.45
MCF2L-206ENST00000397021 JDP2Q8WYK2 163 aa12.26□□□□□ -0.45
MCF2L-206ENST00000397021 C9orf78Q9NZ63 289 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-206ENST00000397021 CHMP3Q9Y3E7 222 aa12.26□□□□□ -0.45
MCF2L-206ENST00000397021 PTPRCP08575 1304 aa12.26□□□□□ -0.45
MCF2L-206ENST00000397021 COL4A5P29400 1685 aa12.26□□□□□ -0.45
MCF2L-206ENST00000397021 LAMB2P55268 1798 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 FER1L6Q2WGJ9 1857 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 POTECB2RU33 542 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 C6orf229H3BNL8 230 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 FZD9O00144 591 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 CT47B1P0C2W7 299 aaPredicted RBP12.25□□□□□ -0.45
MCF2L-206ENST00000397021 NBPF7P0C2Y1 421 aaPredicted RBP12.25□□□□□ -0.45
MCF2L-206ENST00000397021 ITGA6P23229 1130 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 FOXO4P98177 505 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 TMC4Q7Z404 712 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 SUPT20HQ8NEM7 779 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 PLA2G12BQ9BX93 195 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 RTFDC1Q9BY42 306 aaPredicted RBP12.25□□□□□ -0.45
MCF2L-206ENST00000397021 POLLQ9UGP5 575 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 GJA3Q9Y6H8 435 aa12.25□□□□□ -0.45
MCF2L-206ENST00000397021 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-206ENST00000397021 BCAR3O75815 825 aa12.24□□□□□ -0.45
MCF2L-206ENST00000397021 CSF1RP07333 972 aa12.24□□□□□ -0.45
MCF2L-206ENST00000397021 LMBR1LQ6UX01 489 aa12.24□□□□□ -0.45
MCF2L-206ENST00000397021 NIM1KQ8IY84 436 aa12.24□□□□□ -0.45
MCF2L-206ENST00000397021 C16orf71Q8IYS4 520 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-206ENST00000397021 SUCLG2Q96I99 432 aa12.24□□□□□ -0.45
MCF2L-206ENST00000397021 CDC5LQ99459 802 aaKnown RBP12.24□□□□□ -0.45
MCF2L-206ENST00000397021 ANKIB1Q9P2G1 1089 aa12.24□□□□□ -0.45
MCF2L-206ENST00000397021 ZBED9Q6R2W3 1325 aa12.23□□□□□ -0.45
MCF2L-206ENST00000397021 UFL1O94874 794 aa12.23□□□□□ -0.45
MCF2L-206ENST00000397021 VEGFAP15692 232 aaPredicted RBP12.23□□□□□ -0.45
MCF2L-206ENST00000397021 EIF6P56537 245 aaKnown RBP12.23□□□□□ -0.45
MCF2L-206ENST00000397021 KIAA2012Q0VF49 1180 aa12.23□□□□□ -0.45
MCF2L-206ENST00000397021 TBC1D16Q8TBP0 767 aa12.23□□□□□ -0.45
MCF2L-206ENST00000397021 TNNQ9UQP3 1299 aa12.23□□□□□ -0.45
MCF2L-206ENST00000397021 TOMM70O94826 608 aa12.22□□□□□ -0.45
MCF2L-206ENST00000397021 IGHMBP2P38935 993 aaKnown RBP12.22□□□□□ -0.45
MCF2L-206ENST00000397021 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
MCF2L-206ENST00000397021 WASHC4Q2M389 1173 aa12.22□□□□□ -0.45
MCF2L-206ENST00000397021 FRAT1Q92837 279 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-206ENST00000397021 KAZALD1Q96I82 304 aa12.22□□□□□ -0.45
MCF2L-206ENST00000397021 ZNF594Q96JF6 807 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-206ENST00000397021 DBNDD1Q9H9R9 158 aa12.22□□□□□ -0.45
MCF2L-206ENST00000397021 SBF1O95248 1867 aa12.22□□□□□ -0.45
MCF2L-206ENST00000397021 TIAM2Q8IVF5 1701 aa12.22□□□□□ -0.45
MCF2L-206ENST00000397021 TAF1P21675 1872 aa12.21□□□□□ -0.45
MCF2L-206ENST00000397021 RTL9Q8NET4 1388 aa12.21□□□□□ -0.45
MCF2L-206ENST00000397021 ANKRD18BA2A2Z9 1011 aa12.21□□□□□ -0.45
MCF2L-206ENST00000397021 YDJCA8MPS7 323 aa12.21□□□□□ -0.45
MCF2L-206ENST00000397021 RAD17O75943 681 aa12.21□□□□□ -0.45
MCF2L-206ENST00000397021 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
MCF2L-206ENST00000397021 POTEJP0CG39 1038 aa12.21□□□□□ -0.45
MCF2L-206ENST00000397021 CXCL9Q07325 125 aa12.21□□□□□ -0.45
MCF2L-206ENST00000397021 IFIT5Q13325 482 aaKnown RBP12.21□□□□□ -0.45
MCF2L-206ENST00000397021 MPHOSPH8Q99549 860 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms