RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 ERBB4Q15303 1308 aa13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 TIMM10P62072 90 aa13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 MAP4K1Q92918 833 aa13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 NEK1Q96PY6 1258 aa13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 RRAGDQ9NQL2 400 aaPredicted RBP13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 DCCP43146 1447 aa13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 CCDC191Q8NCU4 936 aa13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 TEX13AQ9BXU3 409 aaPredicted RBP13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 MED1Q15648 1581 aaPredicted RBP13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 ZNF594Q96JF6 807 aaPredicted RBP13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 TMEM63CQ9P1W3 806 aa13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 KIF3AQ9Y496 699 aa13.74□□□□□ -0.21
PDXDC1-202ENST00000396410 CCDC129Q6ZRS4 1044 aa13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 KDM3BQ7LBC6 1761 aa13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 GPTP24298 496 aa13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 FOSBP53539 338 aa13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 KRT85P78386 507 aa13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 PAG1Q9NWQ8 432 aa13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 LETM1O95202 739 aaPredicted RBP13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 IFIT5Q13325 482 aaKnown RBP13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 TTC14Q96N46 770 aa13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 CARD10Q9BWT7 1032 aa13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 CNNM1Q9NRU3 951 aa13.73□□□□□ -0.21
PDXDC1-202ENST00000396410 RBSNQ9H1K0 784 aa13.72□□□□□ -0.21
PDXDC1-202ENST00000396410 AKAP2Q9Y2D5 859 aa13.72□□□□□ -0.21
PDXDC1-202ENST00000396410 NECTIN1Q15223 517 aa13.72□□□□□ -0.21
PDXDC1-202ENST00000396410 BTG4Q9NY30 223 aa13.72□□□□□ -0.21
PDXDC1-202ENST00000396410 ME3Q16798 604 aa13.72□□□□□ -0.21
PDXDC1-202ENST00000396410 EYA2O00167 538 aa13.72□□□□□ -0.21
PDXDC1-202ENST00000396410 GADD45BO75293 160 aaPredicted RBP13.72□□□□□ -0.21
PDXDC1-202ENST00000396410 RPS6KB1P23443 525 aa13.72□□□□□ -0.21
PDXDC1-202ENST00000396410 SNRKQ9NRH2 765 aa13.72□□□□□ -0.21
PDXDC1-202ENST00000396410 LARGE1O95461 756 aa13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 CCDC183Q5T5S1 534 aa13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 ZNF589Q86UQ0 364 aaPredicted RBP13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 ZNF335Q9H4Z2 1342 aaPredicted RBP13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 NBPF26B4DH59 902 aa13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 UBE2HP62256 183 aa13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 NBPF14Q5TI25 921 aa13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 NBPF15Q8N660 670 aa13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.71□□□□□ -0.21
PDXDC1-202ENST00000396410 DNM1Q05193 864 aaKnown RBP13.71□□□□□ -0.22
PDXDC1-202ENST00000396410 DDX11Q96FC9 970 aa13.71□□□□□ -0.22
PDXDC1-202ENST00000396410 FAM177BA6PVY3 158 aa13.71□□□□□ -0.22
PDXDC1-202ENST00000396410 METTL24Q5JXM2 366 aa13.71□□□□□ -0.22
PDXDC1-202ENST00000396410 NSFL1CQ9UNZ2 370 aaKnown RBP13.71□□□□□ -0.22
PDXDC1-202ENST00000396410 FAM89AQ96GI7 184 aa13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 SEC62Q99442 399 aaKnown RBP13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 A0A1B0GUL7 405 aa13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 DNAJC10Q8IXB1 793 aa13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 BICD2Q8TD16 824 aa13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 LRRC2Q9BYS8 371 aa13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 TPCN1Q9ULQ1 816 aa13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 APPP05067 770 aa13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 KBTBD3Q8NAB2 608 aa13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 HAUS7Q99871 368 aa13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 CPDO75976 1380 aa13.7□□□□□ -0.22
PDXDC1-202ENST00000396410 H7C1W4 665 aa13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 EXOC5O00471 708 aa13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 Q6ZUG5 572 aa13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 TAF5LO75529 589 aa13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 HMGB1P09429 215 aaKnown RBP13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 LRRC24Q50LG9 513 aa13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 CHMP4CQ96CF2 233 aa13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 RABL6Q3YEC7 729 aaPredicted RBP13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 DNTTIP2Q5QJE6 756 aaKnown RBP13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 BRF1Q92994 677 aa13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 TRMT112Q9UI30 125 aaKnown RBP13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 SPATA32Q96LK8 384 aa13.69□□□□□ -0.22
PDXDC1-202ENST00000396410 HSP90AB3PQ58FF7 597 aa13.68□□□□□ -0.22
PDXDC1-202ENST00000396410 ZSCAN30Q86W11 494 aa13.68□□□□□ -0.22
PDXDC1-202ENST00000396410 TCIRG1Q13488 830 aa13.68□□□□□ -0.22
PDXDC1-202ENST00000396410 LDHAL6AQ6ZMR3 332 aa13.68□□□□□ -0.22
PDXDC1-202ENST00000396410 RALYLQ86SE5 291 aaKnown RBP13.68□□□□□ -0.22
PDXDC1-202ENST00000396410 KAT6BQ8WYB5 2073 aa13.68□□□□□ -0.22
PDXDC1-202ENST00000396410 CLCN1P35523 988 aa13.68□□□□□ -0.22
PDXDC1-202ENST00000396410 CCDC39Q9UFE4 941 aa13.68□□□□□ -0.22
PDXDC1-202ENST00000396410 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.67□□□□□ -0.228e-7■■□□□ 14.4
PDXDC1-202ENST00000396410 ASAP1Q9ULH1 1129 aa13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 RGPD5Q99666 1765 aa13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 HELLSQ9NRZ9 838 aa13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 CTNNA3Q9UI47 895 aa13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 ANKRD18BA2A2Z9 1011 aa13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 CEBPZQ03701 1054 aaKnown RBP13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 TRDNQ13061 729 aa13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 RNF113AO15541 343 aaKnown RBP13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 FOXO4P98177 505 aa13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 KIAA2012Q0VF49 1180 aa13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 TFIP11Q9UBB9 837 aaKnown RBP13.67□□□□□ -0.22
PDXDC1-202ENST00000396410 PHRF1Q9P1Y6 1649 aaKnown RBP13.66□□□□□ -0.22
PDXDC1-202ENST00000396410 PUS3Q9BZE2 481 aaKnown RBP13.66□□□□□ -0.22
PDXDC1-202ENST00000396410 MTMR6Q9Y217 621 aa13.66□□□□□ -0.22
PDXDC1-202ENST00000396410 ZRSR1Q15695 479 aaKnown RBP13.66□□□□□ -0.22
PDXDC1-202ENST00000396410 IMMTQ16891 758 aaKnown RBP13.66□□□□□ -0.22
PDXDC1-202ENST00000396410 CPLX1O14810 134 aa13.66□□□□□ -0.22
PDXDC1-202ENST00000396410 CCT2P78371 535 aaKnown RBP13.66□□□□□ -0.22
PDXDC1-202ENST00000396410 TRPM3Q9HCF6 1732 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms