RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 BEND3Q5T5X7 828 aa12.45□□□□□ -0.42
TUBB-208ENST00000396389 BCCIPQ9P287 314 aaKnown RBP eCLIP12.45□□□□□ -0.42
TUBB-208ENST00000396389 COL15A1P39059 1388 aa12.45□□□□□ -0.42
TUBB-208ENST00000396389 IL6STP40189 918 aaPredicted RBP12.45□□□□□ -0.42
TUBB-208ENST00000396389 C17orf53Q8N3J3 647 aaPredicted RBP12.45□□□□□ -0.42
TUBB-208ENST00000396389 CAMKK2Q96RR4 588 aa12.45□□□□□ -0.42
TUBB-208ENST00000396389 TMEM63CQ9P1W3 806 aa12.45□□□□□ -0.42
TUBB-208ENST00000396389 NIP7Q9Y221 180 aaKnown RBP eCLIP12.45□□□□□ -0.42
TUBB-208ENST00000396389 ZKSCAN5Q9Y2L8 839 aa12.45□□□□□ -0.42
TUBB-208ENST00000396389 ABCC4O15439 1325 aa12.45□□□□□ -0.42
TUBB-208ENST00000396389 A0A087WZG4 1122 aa12.44□□□□□ -0.42
TUBB-208ENST00000396389 ZNF500O60304 480 aaPredicted RBP12.44□□□□□ -0.42
TUBB-208ENST00000396389 ZNF445P59923 1031 aa12.44□□□□□ -0.42
TUBB-208ENST00000396389 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
TUBB-208ENST00000396389 C16orf71Q8IYS4 520 aaPredicted RBP12.44□□□□□ -0.42
TUBB-208ENST00000396389 PLBD2Q8NHP8 589 aa12.44□□□□□ -0.42
TUBB-208ENST00000396389 LRRFIP2Q9Y608 721 aaKnown RBP12.44□□□□□ -0.42
TUBB-208ENST00000396389 PLSCR1O15162 318 aa12.44□□□□□ -0.42
TUBB-208ENST00000396389 CBX1P83916 185 aa12.44□□□□□ -0.42
TUBB-208ENST00000396389 UPF1Q92900 1129 aaKnown RBP eCLIP12.44□□□□□ -0.426e-8■■□□□ 11.7
TUBB-208ENST00000396389 PDLIM2Q96JY6 352 aa12.44□□□□□ -0.42
TUBB-208ENST00000396389 USP44Q9H0E7 712 aa12.44□□□□□ -0.42
TUBB-208ENST00000396389 SOS1Q07889 1333 aaPredicted RBP12.43□□□□□ -0.42
TUBB-208ENST00000396389 ZBTB7BO15156 539 aaPredicted RBP12.43□□□□□ -0.42
TUBB-208ENST00000396389 DNTTIP2Q5QJE6 756 aaKnown RBP12.43□□□□□ -0.42
TUBB-208ENST00000396389 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
TUBB-208ENST00000396389 METTL22Q9BUU2 404 aaPredicted RBP12.43□□□□□ -0.42
TUBB-208ENST00000396389 MAP3K15Q6ZN16 1313 aa12.43□□□□□ -0.42
TUBB-208ENST00000396389 NEURL1BA8MQ27 555 aa12.43□□□□□ -0.42
TUBB-208ENST00000396389 RPS6KA4O75676 772 aa12.43□□□□□ -0.42
TUBB-208ENST00000396389 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
TUBB-208ENST00000396389 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
TUBB-208ENST00000396389 KLHDC4Q8TBB5 520 aa12.43□□□□□ -0.42
TUBB-208ENST00000396389 ARHGAP45Q92619 1136 aa12.43□□□□□ -0.42
TUBB-208ENST00000396389 MYH14Q7Z406 1995 aaKnown RBP12.42□□□□□ -0.42
TUBB-208ENST00000396389 IGSF3O75054 1194 aa12.42□□□□□ -0.42
TUBB-208ENST00000396389 CAMTA2O94983 1202 aa12.42□□□□□ -0.42
TUBB-208ENST00000396389 HCLS1P14317 486 aaPredicted RBP12.42□□□□□ -0.42
TUBB-208ENST00000396389 R3HDM1Q15032 1099 aaKnown RBP12.42□□□□□ -0.42
TUBB-208ENST00000396389 SLC27A3Q5K4L6 730 aa12.42□□□□□ -0.42
TUBB-208ENST00000396389 SIRT2Q8IXJ6 389 aa12.42□□□□□ -0.42
TUBB-208ENST00000396389 TRMT112Q9UI30 125 aaKnown RBP12.42□□□□□ -0.42
TUBB-208ENST00000396389 ZDHHC9Q9Y397 364 aa12.42□□□□□ -0.42
TUBB-208ENST00000396389 UBTFL1P0CB47 393 aaPredicted RBP12.42□□□□□ -0.42
TUBB-208ENST00000396389 GSPT1P15170 499 aaKnown RBP12.42□□□□□ -0.42
TUBB-208ENST00000396389 NHSQ6T4R5 1651 aa12.42□□□□□ -0.42
TUBB-208ENST00000396389 UBN2Q6ZU65 1347 aa12.42□□□□□ -0.42
TUBB-208ENST00000396389 PTMAP06454 111 aaKnown RBP12.41□□□□□ -0.42
TUBB-208ENST00000396389 PTMSP20962 102 aa12.41□□□□□ -0.42
TUBB-208ENST00000396389 CCT4P50991 539 aaKnown RBP12.41□□□□□ -0.42
TUBB-208ENST00000396389 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
TUBB-208ENST00000396389 SBF2Q86WG5 1849 aa12.41□□□□□ -0.42
TUBB-208ENST00000396389 ZBTB7AO95365 584 aa12.41□□□□□ -0.42
TUBB-208ENST00000396389 GCKRQ14397 625 aa12.41□□□□□ -0.42
TUBB-208ENST00000396389 INTS3Q68E01 1043 aaKnown RBP12.41□□□□□ -0.42
TUBB-208ENST00000396389 PPP1R1BQ9UD71 204 aaPredicted RBP12.41□□□□□ -0.42
TUBB-208ENST00000396389 TERF1P54274 439 aa12.41□□□□□ -0.42
TUBB-208ENST00000396389 NOL8Q76FK4 1167 aaKnown RBP12.41□□□□□ -0.42
TUBB-208ENST00000396389 LINS1Q8NG48 757 aa12.41□□□□□ -0.42
TUBB-208ENST00000396389 OTUD7AQ8TE49 926 aaPredicted RBP12.41□□□□□ -0.42
TUBB-208ENST00000396389 MAP7D2Q96T17 732 aa12.41□□□□□ -0.42
TUBB-208ENST00000396389 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
TUBB-208ENST00000396389 NAP1L2Q9ULW6 460 aaPredicted RBP12.41□□□□□ -0.42
TUBB-208ENST00000396389 DYNC1I1O14576 645 aa12.4□□□□□ -0.42
TUBB-208ENST00000396389 TCIRG1Q13488 830 aa12.4□□□□□ -0.42
TUBB-208ENST00000396389 EPHA10Q5JZY3 1008 aa12.4□□□□□ -0.42
TUBB-208ENST00000396389 SUSD4Q5VX71 490 aa12.4□□□□□ -0.42
TUBB-208ENST00000396389 GIGYF2Q6Y7W6 1299 aaKnown RBP12.4□□□□□ -0.42
TUBB-208ENST00000396389 SIL1Q9H173 461 aa12.4□□□□□ -0.42
TUBB-208ENST00000396389 CNTNAP4Q9C0A0 1308 aa12.4□□□□□ -0.42
TUBB-208ENST00000396389 GRM8O00222 908 aa12.4□□□□□ -0.42
TUBB-208ENST00000396389 SASS6Q6UVJ0 657 aa12.4□□□□□ -0.42
TUBB-208ENST00000396389 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.4□□□□□ -0.42
TUBB-208ENST00000396389 SMAP1Q8IYB5 467 aaPredicted RBP12.4□□□□□ -0.42
TUBB-208ENST00000396389 SUCLG2Q96I99 432 aa12.4□□□□□ -0.42
TUBB-208ENST00000396389 UBR2Q8IWV8 1755 aa12.39□□□□□ -0.43
TUBB-208ENST00000396389 SLC15A2Q16348 729 aa12.39□□□□□ -0.43
TUBB-208ENST00000396389 TMEM132AQ24JP5 1023 aa12.39□□□□□ -0.43
TUBB-208ENST00000396389 CLEC17AQ6ZS10 378 aa12.39□□□□□ -0.43
TUBB-208ENST00000396389 GDPD2Q9HCC8 539 aa12.39□□□□□ -0.43
TUBB-208ENST00000396389 CWC25Q9NXE8 425 aaPredicted RBP12.39□□□□□ -0.43
TUBB-208ENST00000396389 STK32BQ9NY57 414 aa12.39□□□□□ -0.43
TUBB-208ENST00000396389 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
TUBB-208ENST00000396389 PAPPAQ13219 1627 aa12.39□□□□□ -0.43
TUBB-208ENST00000396389 PNMA6EA0A0J9YXQ4 647 aa12.39□□□□□ -0.43
TUBB-208ENST00000396389 BICC1Q9H694 974 aaKnown RBP12.39□□□□□ -0.43
TUBB-208ENST00000396389 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.39□□□□□ -0.431e-15■■□□□ 12.2
TUBB-208ENST00000396389 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 HS1BP3Q53T59 392 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 NLRP10Q86W26 655 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 PA2G4Q9UQ80 394 aaKnown RBP12.38□□□□□ -0.43
TUBB-208ENST00000396389 CYP2E1P05181 493 aaPredicted RBP12.38□□□□□ -0.43
TUBB-208ENST00000396389 ZSCAN20P17040 1043 aaPredicted RBP12.38□□□□□ -0.43
TUBB-208ENST00000396389 ZNF710Q8N1W2 664 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 CDC45O75419 566 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 GYS1P13807 737 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 NUCB2P80303 420 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms