RNA–Protein interactions for RNA: ENST00000396191.5

PDE1C-205, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-205ENST00000396191 USP44Q9H0E7 712 aa16.22■□□□□ 0.19
PDE1C-205ENST00000396191 ORC3Q9UBD5 711 aaPredicted RBP16.22■□□□□ 0.19
PDE1C-205ENST00000396191 EFCAB6Q5THR3 1501 aa16.21■□□□□ 0.19
PDE1C-205ENST00000396191 BIN1O00499 593 aa16.21■□□□□ 0.19
PDE1C-205ENST00000396191 ZRANB2O95218 330 aaKnown RBP eCLIP16.21■□□□□ 0.19
PDE1C-205ENST00000396191 TPM4P67936 248 aa16.21■□□□□ 0.19
PDE1C-205ENST00000396191 ARMCX5Q6P1M9 558 aa16.21■□□□□ 0.19
PDE1C-205ENST00000396191 RBM43Q6ZSC3 357 aaKnown RBP16.21■□□□□ 0.19
PDE1C-205ENST00000396191 NBPF11Q86T75 865 aa16.21■□□□□ 0.19
PDE1C-205ENST00000396191 RBM8AQ9Y5S9 174 aaKnown RBP16.21■□□□□ 0.19
PDE1C-205ENST00000396191 ELP1O95163 1332 aa16.21■□□□□ 0.19
PDE1C-205ENST00000396191 CDC25BP30305 580 aa16.21■□□□□ 0.19
PDE1C-205ENST00000396191 CCAR1Q8IX12 1150 aaKnown RBP16.21■□□□□ 0.19
PDE1C-205ENST00000396191 TXLNBQ8N3L3 684 aa16.21■□□□□ 0.19
PDE1C-205ENST00000396191 GOLPH3LQ9H4A5 285 aa16.21■□□□□ 0.19
PDE1C-205ENST00000396191 NEMFO60524 1076 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 SMC1AQ14683 1233 aaKnown RBP16.2■□□□□ 0.18
PDE1C-205ENST00000396191 ZSWIM4Q9H7M6 989 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 L2HGDHQ9H9P8 463 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 IFNKQ9P0W0 207 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 H3BQV1 296 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 FANCGO15287 622 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 ZKSCAN1P17029 563 aaPredicted RBP16.2■□□□□ 0.18
PDE1C-205ENST00000396191 GTF2A1P52655 376 aaPredicted RBP16.2■□□□□ 0.18
PDE1C-205ENST00000396191 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
PDE1C-205ENST00000396191 IFFO2Q5TF58 517 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 COG3Q96JB2 828 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 LRRC2Q9BYS8 371 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 CCDC93Q567U6 631 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 CREB3L3Q68CJ9 461 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 BRF1Q92994 677 aa16.2■□□□□ 0.18
PDE1C-205ENST00000396191 XPO4Q9C0E2 1151 aaKnown RBP16.2■□□□□ 0.18
PDE1C-205ENST00000396191 ARGLU1Q9NWB6 273 aaPredicted RBP16.2■□□□□ 0.18
PDE1C-205ENST00000396191 NOP2P46087 812 aaKnown RBP16.19■□□□□ 0.18
PDE1C-205ENST00000396191 GUCY1B3Q02153 619 aa16.19■□□□□ 0.18
PDE1C-205ENST00000396191 STX1AQ16623 288 aa16.19■□□□□ 0.18
PDE1C-205ENST00000396191 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
PDE1C-205ENST00000396191 FOXR1Q6PIV2 292 aa16.19■□□□□ 0.18
PDE1C-205ENST00000396191 HDAC5Q9UQL6 1122 aa16.19■□□□□ 0.18
PDE1C-205ENST00000396191 PPLO60437 1756 aa16.19■□□□□ 0.18
PDE1C-205ENST00000396191 NUTM2FA1L443 756 aa16.18■□□□□ 0.18
PDE1C-205ENST00000396191 EVCP57679 992 aa16.18■□□□□ 0.18
PDE1C-205ENST00000396191 HSP90AB2PQ58FF8 381 aa16.18■□□□□ 0.18
PDE1C-205ENST00000396191 RNF20Q5VTR2 975 aa16.18■□□□□ 0.18
PDE1C-205ENST00000396191 SARM1Q6SZW1 724 aa16.18■□□□□ 0.18
PDE1C-205ENST00000396191 SIL1Q9H173 461 aa16.18■□□□□ 0.18
PDE1C-205ENST00000396191 TBC1D8O95759 1140 aa16.18■□□□□ 0.18
PDE1C-205ENST00000396191 PHAXQ9H814 394 aaKnown RBP16.18■□□□□ 0.18
PDE1C-205ENST00000396191 RPGRIP1LQ68CZ1 1315 aa16.18■□□□□ 0.18
PDE1C-205ENST00000396191 PDCP20941 246 aa16.17■□□□□ 0.18
PDE1C-205ENST00000396191 SFPQP23246 707 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDE1C-205ENST00000396191 UHRF1BP1LA0JNW5 1464 aa16.17■□□□□ 0.18
PDE1C-205ENST00000396191 CPSF1Q10570 1443 aaKnown RBP16.17■□□□□ 0.18
PDE1C-205ENST00000396191 TTC21BQ7Z4L5 1316 aa16.17■□□□□ 0.18
PDE1C-205ENST00000396191 NBPF7P0C2Y1 421 aaPredicted RBP16.17■□□□□ 0.18
PDE1C-205ENST00000396191 REXO1L1PQ8IX06 675 aa16.17■□□□□ 0.18
PDE1C-205ENST00000396191 PLEKHA4Q9H4M7 779 aa16.17■□□□□ 0.18
PDE1C-205ENST00000396191 RRP15Q9Y3B9 282 aaKnown RBP16.17■□□□□ 0.18
PDE1C-205ENST00000396191 CASQ1P31415 396 aa16.17■□□□□ 0.18
PDE1C-205ENST00000396191 DRC1Q96MC2 740 aa16.17■□□□□ 0.18
PDE1C-205ENST00000396191 GPS2Q13227 327 aa16.16■□□□□ 0.18
PDE1C-205ENST00000396191 SART3Q15020 963 aaKnown RBP16.16■□□□□ 0.18
PDE1C-205ENST00000396191 NECTIN1Q15223 517 aa16.16■□□□□ 0.18
PDE1C-205ENST00000396191 BLOC1S2Q6QNY1 142 aa16.16■□□□□ 0.18
PDE1C-205ENST00000396191 GPATCH11Q8N954 259 aa16.16■□□□□ 0.18
PDE1C-205ENST00000396191 ADAM21Q9UKJ8 722 aa16.16■□□□□ 0.18
PDE1C-205ENST00000396191 NEURL4Q96JN8 1562 aa16.16■□□□□ 0.18
PDE1C-205ENST00000396191 KINO60870 393 aaKnown RBP16.15■□□□□ 0.18
PDE1C-205ENST00000396191 SDF4Q9BRK5 362 aa16.15■□□□□ 0.18
PDE1C-205ENST00000396191 PA2G4Q9UQ80 394 aaKnown RBP16.15■□□□□ 0.18
PDE1C-205ENST00000396191 FANCAO15360 1455 aa16.15■□□□□ 0.18
PDE1C-205ENST00000396191 SLC27A2O14975 620 aa16.15■□□□□ 0.18
PDE1C-205ENST00000396191 LMOD1P29536 600 aaPredicted RBP16.15■□□□□ 0.18
PDE1C-205ENST00000396191 ETF1P62495 437 aaKnown RBP16.15■□□□□ 0.18
PDE1C-205ENST00000396191 DPCR1Q3MIW9 517 aa16.15■□□□□ 0.18
PDE1C-205ENST00000396191 HSP90AA4PQ58FG1 418 aa16.15■□□□□ 0.18
PDE1C-205ENST00000396191 UTP14AQ9BVJ6 771 aaKnown RBP16.15■□□□□ 0.18
PDE1C-205ENST00000396191 H3BQF6 201 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 ME1P48163 572 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 TOB2Q14106 344 aaPredicted RBP16.14■□□□□ 0.17
PDE1C-205ENST00000396191 MTHFSDQ2M296 383 aaKnown RBP16.14■□□□□ 0.17
PDE1C-205ENST00000396191 CREBRFQ8IUR6 639 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 ADCY9O60503 1353 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 CDK12Q9NYV4 1490 aaPredicted RBP16.14■□□□□ 0.17
PDE1C-205ENST00000396191 A0A1B0GVL5 298 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 KIF2AO00139 706 aaPredicted RBP16.14■□□□□ 0.17
PDE1C-205ENST00000396191 CLGNO14967 610 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
PDE1C-205ENST00000396191 NMIQ13287 307 aaPredicted RBP16.14■□□□□ 0.17
PDE1C-205ENST00000396191 MUM1L1Q5H9M0 696 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 CC2D1AQ6P1N0 951 aaPredicted RBP16.14■□□□□ 0.17
PDE1C-205ENST00000396191 CCDC73Q6ZRK6 1079 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 SRLQ86TD4 932 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 CEP57L1Q8IYX8 460 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 FSIP1Q8NA03 581 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 SSH3Q8TE77 659 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 EFCC1Q9HA90 598 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 ASXL2Q76L83 1435 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 AATKQ6ZMQ8 1374 aa16.14■□□□□ 0.17
PDE1C-205ENST00000396191 KIF13AQ9H1H9 1805 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms