RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 GTF2E1P29083 439 aaPredicted RBP10.94□□□□□ -0.66
CCR9-203ENST00000395963 CCDC57Q2TAC2 916 aa10.94□□□□□ -0.66
CCR9-203ENST00000395963 FAM89AQ96GI7 184 aa10.94□□□□□ -0.66
CCR9-203ENST00000395963 ZBTB47Q9UFB7 747 aaPredicted RBP10.94□□□□□ -0.66
CCR9-203ENST00000395963 ANKRD18BA2A2Z9 1011 aa10.93□□□□□ -0.66
CCR9-203ENST00000395963 SERPINB2P05120 415 aa10.93□□□□□ -0.66
CCR9-203ENST00000395963 TTLL11Q8NHH1 800 aa10.93□□□□□ -0.66
CCR9-203ENST00000395963 KIF1BPQ96EK5 621 aa10.93□□□□□ -0.66
CCR9-203ENST00000395963 CDC5LQ99459 802 aaKnown RBP10.93□□□□□ -0.66
CCR9-203ENST00000395963 C1orf115Q9H7X2 142 aa10.93□□□□□ -0.66
CCR9-203ENST00000395963 GPR108Q9NPR9 543 aa10.93□□□□□ -0.66
CCR9-203ENST00000395963 RFX5P48382 616 aaPredicted RBP10.93□□□□□ -0.66
CCR9-203ENST00000395963 IFIT5Q13325 482 aaKnown RBP10.93□□□□□ -0.66
CCR9-203ENST00000395963 LMBR1LQ6UX01 489 aa10.93□□□□□ -0.66
CCR9-203ENST00000395963 BRIP1Q9BX63 1249 aa10.93□□□□□ -0.66
CCR9-203ENST00000395963 MTFR1LQ9H019 292 aa10.93□□□□□ -0.66
CCR9-203ENST00000395963 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
CCR9-203ENST00000395963 KIF13BQ9NQT8 1826 aa10.93□□□□□ -0.66
CCR9-203ENST00000395963 NUCB1Q02818 461 aa10.92□□□□□ -0.66
CCR9-203ENST00000395963 CRY2Q49AN0 593 aa10.92□□□□□ -0.66
CCR9-203ENST00000395963 B4GALNT3Q6L9W6 998 aa10.92□□□□□ -0.66
CCR9-203ENST00000395963 PRR5LQ6MZQ0 368 aa10.92□□□□□ -0.66
CCR9-203ENST00000395963 PNMA6EA0A0J9YXQ4 647 aa10.92□□□□□ -0.66
CCR9-203ENST00000395963 ZBTB22O15209 634 aa10.92□□□□□ -0.66
CCR9-203ENST00000395963 IGHDP01880 384 aa10.92□□□□□ -0.66
CCR9-203ENST00000395963 PDE6BP35913 854 aa10.92□□□□□ -0.66
CCR9-203ENST00000395963 IL15P40933 162 aaPredicted RBP10.92□□□□□ -0.66
CCR9-203ENST00000395963 C10orf71Q711Q0 1435 aa10.92□□□□□ -0.66
CCR9-203ENST00000395963 ABCC12Q96J65 1359 aa10.91□□□□□ -0.66
CCR9-203ENST00000395963 EP400Q96L91 3159 aa10.91□□□□□ -0.66
CCR9-203ENST00000395963 G3BP1Q13283 466 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCR9-203ENST00000395963 ERFEQ4G0M1 354 aa10.91□□□□□ -0.66
CCR9-203ENST00000395963 EPHA10Q5JZY3 1008 aa10.91□□□□□ -0.66
CCR9-203ENST00000395963 LRRCC1Q9C099 1032 aa10.91□□□□□ -0.66
CCR9-203ENST00000395963 AOX1Q06278 1338 aa10.91□□□□□ -0.66
CCR9-203ENST00000395963 HOXA10P31260 410 aaPredicted RBP10.91□□□□□ -0.66
CCR9-203ENST00000395963 PTPN12Q05209 780 aaKnown RBP10.91□□□□□ -0.66
CCR9-203ENST00000395963 DDR1Q08345 913 aa10.91□□□□□ -0.66
CCR9-203ENST00000395963 DLEC1Q9Y238 1755 aa10.91□□□□□ -0.66
CCR9-203ENST00000395963 TNRC6CQ9HCJ0 1690 aaKnown RBP10.9□□□□□ -0.66
CCR9-203ENST00000395963 NPHP1O15259 732 aa10.9□□□□□ -0.66
CCR9-203ENST00000395963 MROH5Q6ZUA9 1318 aa10.9□□□□□ -0.66
CCR9-203ENST00000395963 LRRC37AA6NMS7 1700 aa10.9□□□□□ -0.66
CCR9-203ENST00000395963 EYA2O00167 538 aa10.9□□□□□ -0.67
CCR9-203ENST00000395963 SURF6O75683 361 aaKnown RBP10.9□□□□□ -0.67
CCR9-203ENST00000395963 MMP10P09238 476 aa10.9□□□□□ -0.67
CCR9-203ENST00000395963 POLD1P28340 1107 aa10.9□□□□□ -0.67
CCR9-203ENST00000395963 CHD1LQ86WJ1 897 aa10.9□□□□□ -0.67
CCR9-203ENST00000395963 CRAMP1Q96RY5 1269 aa10.9□□□□□ -0.67
CCR9-203ENST00000395963 ITGA6P23229 1130 aa10.89□□□□□ -0.67
CCR9-203ENST00000395963 IGHMBP2P38935 993 aaKnown RBP10.89□□□□□ -0.67
CCR9-203ENST00000395963 GRIPAP1Q4V328 841 aa10.89□□□□□ -0.67
CCR9-203ENST00000395963 TAF7LQ5H9L4 462 aa10.89□□□□□ -0.67
CCR9-203ENST00000395963 BICDL1Q6ZP65 573 aa10.89□□□□□ -0.67
CCR9-203ENST00000395963 TICAM2Q86XR7 235 aa10.89□□□□□ -0.67
CCR9-203ENST00000395963 AKAP2Q9Y2D5 859 aa10.89□□□□□ -0.67
CCR9-203ENST00000395963 ANKRD31Q8N7Z5 1873 aa10.89□□□□□ -0.67
CCR9-203ENST00000395963 ARAP2Q8WZ64 1704 aa10.89□□□□□ -0.67
CCR9-203ENST00000395963 DDX46Q7L014 1031 aaKnown RBP10.89□□□□□ -0.67
CCR9-203ENST00000395963 RBM17Q96I25 401 aaKnown RBP10.89□□□□□ -0.67
CCR9-203ENST00000395963 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
CCR9-203ENST00000395963 RHPN1Q8TCX5 695 aa10.88□□□□□ -0.67
CCR9-203ENST00000395963 EIF5BO60841 1220 aaKnown RBP10.88□□□□□ -0.67
CCR9-203ENST00000395963 NPR1P16066 1061 aa10.88□□□□□ -0.67
CCR9-203ENST00000395963 STYK1Q6J9G0 422 aa10.88□□□□□ -0.67
CCR9-203ENST00000395963 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
CCR9-203ENST00000395963 ANKRD18AQ8IVF6 992 aa10.88□□□□□ -0.67
CCR9-203ENST00000395963 CLASRPQ8N2M8 674 aaKnown RBP10.88□□□□□ -0.67
CCR9-203ENST00000395963 OSBPL3Q9H4L5 887 aa10.88□□□□□ -0.67
CCR9-203ENST00000395963 GREM2Q9H772 168 aa10.88□□□□□ -0.67
CCR9-203ENST00000395963 BSDC1Q9NW68 430 aaPredicted RBP10.88□□□□□ -0.67
CCR9-203ENST00000395963 IGSF3O75054 1194 aa10.87□□□□□ -0.67
CCR9-203ENST00000395963 BBOX1O75936 387 aa10.87□□□□□ -0.67
CCR9-203ENST00000395963 HCLS1P14317 486 aaPredicted RBP10.87□□□□□ -0.67
CCR9-203ENST00000395963 ALDH1B1P30837 517 aa10.87□□□□□ -0.67
CCR9-203ENST00000395963 OS9Q13438 667 aaPredicted RBP10.87□□□□□ -0.67
CCR9-203ENST00000395963 GRAPQ13588 217 aa10.87□□□□□ -0.67
CCR9-203ENST00000395963 GRAPLQ8TC17 118 aaPredicted RBP10.87□□□□□ -0.67
CCR9-203ENST00000395963 RPGRQ92834 1020 aaKnown RBP10.87□□□□□ -0.67
CCR9-203ENST00000395963 CHMP3Q9Y3E7 222 aa10.87□□□□□ -0.67
CCR9-203ENST00000395963 A0A1B0GUL6 1792 aa10.87□□□□□ -0.67
CCR9-203ENST00000395963 GPATCH3Q96I76 525 aa10.87□□□□□ -0.67
CCR9-203ENST00000395963 MPHOSPH8Q99549 860 aa10.87□□□□□ -0.67
CCR9-203ENST00000395963 ANKRD2Q9GZV1 360 aa10.87□□□□□ -0.67
CCR9-203ENST00000395963 TTC41PQ6P2S7 1318 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 CC2D2BQ6DHV5 1058 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 SMIM5Q71RC9 77 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 MASTLQ96GX5 879 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 ZNF609O15014 1411 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 TGFB2P61812 414 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 ANKRD45Q5TZF3 282 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 LDHAL6AQ6ZMR3 332 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 CEP126Q9P2H0 1117 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 STAP2Q9UGK3 403 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 RIPOR2Q9Y4F9 1068 aa10.86□□□□□ -0.67
CCR9-203ENST00000395963 RPS8P62241 208 aaKnown RBP10.85□□□□□ -0.67
CCR9-203ENST00000395963 ATG9AQ7Z3C6 839 aa10.85□□□□□ -0.67
CCR9-203ENST00000395963 EXOC6BQ9Y2D4 811 aa10.85□□□□□ -0.67
CCR9-203ENST00000395963 COL11A2P13942 1736 aaPredicted RBP10.85□□□□□ -0.67
CCR9-203ENST00000395963 SPEF2Q9C093 1822 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms