RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
RTFDC1-203ENST00000395881 PARP3Q9Y6F1 533 aa17.64■□□□□ 0.41
RTFDC1-203ENST00000395881 BCORQ6W2J9 1755 aa17.64■□□□□ 0.41
RTFDC1-203ENST00000395881 POLRMTO00411 1230 aaKnown RBP17.63■□□□□ 0.41
RTFDC1-203ENST00000395881 CAMTA2O94983 1202 aa17.63■□□□□ 0.41
RTFDC1-203ENST00000395881 NFIXQ14938 502 aa17.63■□□□□ 0.41
RTFDC1-203ENST00000395881 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
RTFDC1-203ENST00000395881 CLASRPQ8N2M8 674 aaKnown RBP17.63■□□□□ 0.41
RTFDC1-203ENST00000395881 ERC2O15083 957 aa17.62■□□□□ 0.41
RTFDC1-203ENST00000395881 DZIP3Q86Y13 1208 aaKnown RBP17.62■□□□□ 0.41
RTFDC1-203ENST00000395881 KIF2CQ99661 725 aa17.62■□□□□ 0.41
RTFDC1-203ENST00000395881 USP26Q9BXU7 913 aa17.62■□□□□ 0.41
RTFDC1-203ENST00000395881 OS9Q13438 667 aaPredicted RBP17.62■□□□□ 0.41
RTFDC1-203ENST00000395881 KIAA1551Q9HCM1 1747 aa17.62■□□□□ 0.41
RTFDC1-203ENST00000395881 IL1RAPL2Q9NP60 686 aa17.62■□□□□ 0.41
RTFDC1-203ENST00000395881 AK9Q5TCS8 1911 aa17.61■□□□□ 0.41
RTFDC1-203ENST00000395881 C10orf71Q711Q0 1435 aa17.61■□□□□ 0.41
RTFDC1-203ENST00000395881 TBC1D9BQ66K14 1250 aa17.61■□□□□ 0.41
RTFDC1-203ENST00000395881 HSCBQ8IWL3 235 aa17.61■□□□□ 0.41
RTFDC1-203ENST00000395881 COPRSQ9NQ92 184 aa17.61■□□□□ 0.41
RTFDC1-203ENST00000395881 NRXN2Q9P2S2 1712 aa17.6■□□□□ 0.41
RTFDC1-203ENST00000395881 H7C1W4 665 aa17.6■□□□□ 0.41
RTFDC1-203ENST00000395881 CASP7P55210 303 aa17.6■□□□□ 0.41
RTFDC1-203ENST00000395881 G3BP1Q13283 466 aaKnown RBP eCLIP17.6■□□□□ 0.415e-10■■□□□ 13.8
RTFDC1-203ENST00000395881 BICDL1Q6ZP65 573 aa17.6■□□□□ 0.41
RTFDC1-203ENST00000395881 CCDC191Q8NCU4 936 aa17.6■□□□□ 0.41
RTFDC1-203ENST00000395881 IL27Q8NEV9 243 aa17.6■□□□□ 0.41
RTFDC1-203ENST00000395881 PI4K2BQ8TCG2 481 aa17.6■□□□□ 0.41
RTFDC1-203ENST00000395881 GPATCH3Q96I76 525 aa17.6■□□□□ 0.41
RTFDC1-203ENST00000395881 GLRX3O76003 335 aaKnown RBP17.59■□□□□ 0.41
RTFDC1-203ENST00000395881 TRIM28Q13263 835 aaKnown RBP17.59■□□□□ 0.41
RTFDC1-203ENST00000395881 CWC25Q9NXE8 425 aaPredicted RBP17.59■□□□□ 0.41
RTFDC1-203ENST00000395881 RABEP1Q15276 862 aa17.58■□□□□ 0.41
RTFDC1-203ENST00000395881 ANTXR1Q9H6X2 564 aa17.58■□□□□ 0.41
RTFDC1-203ENST00000395881 NUP98P52948 1817 aa17.58■□□□□ 0.4
RTFDC1-203ENST00000395881 SERPINB2P05120 415 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 CHMLP26374 656 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 TTLL7Q6ZT98 887 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 NUTM1Q86Y26 1132 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 ESYT1Q9BSJ8 1104 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 DCAF8L1A6NGE4 600 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 TRIM6-TRIM34B2RNG4 842 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 HLFQ16534 295 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 CLEC4GQ6UXB4 293 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 UBE3BQ7Z3V4 1068 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 ECHDC1Q9NTX5 307 aa17.57■□□□□ 0.4
RTFDC1-203ENST00000395881 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
RTFDC1-203ENST00000395881 RFX5P48382 616 aaPredicted RBP17.56■□□□□ 0.4
RTFDC1-203ENST00000395881 GPR162Q16538 588 aa17.56■□□□□ 0.4
RTFDC1-203ENST00000395881 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
RTFDC1-203ENST00000395881 CNTROBQ8N137 903 aa17.56■□□□□ 0.4
RTFDC1-203ENST00000395881 ISCA1Q9BUE6 129 aa17.56■□□□□ 0.4
RTFDC1-203ENST00000395881 GOLGB1Q14789 3259 aaKnown RBP17.56■□□□□ 0.4
RTFDC1-203ENST00000395881 A0A0G2JLW4 131 aa17.55■□□□□ 0.4
RTFDC1-203ENST00000395881 SASH1O94885 1247 aa17.55■□□□□ 0.4
RTFDC1-203ENST00000395881 YBX3P16989 372 aaKnown RBP eCLIP17.55■□□□□ 0.47e-7■■■□□ 15.1
RTFDC1-203ENST00000395881 TGFB2P61812 414 aa17.55■□□□□ 0.4
RTFDC1-203ENST00000395881 EPHA10Q5JZY3 1008 aa17.55■□□□□ 0.4
RTFDC1-203ENST00000395881 TSHZ3Q63HK5 1081 aa17.55■□□□□ 0.4
RTFDC1-203ENST00000395881 IL17RAQ96F46 866 aa17.55■□□□□ 0.4
RTFDC1-203ENST00000395881 PA2G4Q9UQ80 394 aaKnown RBP17.55■□□□□ 0.4
RTFDC1-203ENST00000395881 BRCA1P38398 1863 aaKnown RBP17.54■□□□□ 0.4
RTFDC1-203ENST00000395881 MAP3K15Q6ZN16 1313 aa17.54■□□□□ 0.4
RTFDC1-203ENST00000395881 ATP5J2-PTCD1G3V325 749 aa17.54■□□□□ 0.4
RTFDC1-203ENST00000395881 RGL2O15211 777 aa17.54■□□□□ 0.4
RTFDC1-203ENST00000395881 DPEP1P16444 411 aa17.54■□□□□ 0.4
RTFDC1-203ENST00000395881 TCIRG1Q13488 830 aa17.54■□□□□ 0.4
RTFDC1-203ENST00000395881 KIF6Q6ZMV9 814 aa17.54■□□□□ 0.4
RTFDC1-203ENST00000395881 RILPL2Q969X0 211 aa17.54■□□□□ 0.4
RTFDC1-203ENST00000395881 SETDB2Q96T68 719 aa17.54■□□□□ 0.4
RTFDC1-203ENST00000395881 WWC3Q9ULE0 1092 aa17.54■□□□□ 0.4
RTFDC1-203ENST00000395881 ERVV-1B6SEH8 477 aa17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 ANKRD31Q8N7Z5 1873 aa17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 KCNA3P22001 575 aa17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 ANAPC15P60006 121 aa17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 FOXO4P98177 505 aa17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 PTPN12Q05209 780 aaKnown RBP17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 NBR1Q14596 966 aa17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 HSP90AB3PQ58FF7 597 aa17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 ZBTB3Q9H5J0 574 aa17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 ZNF652Q9Y2D9 606 aa17.53■□□□□ 0.4
RTFDC1-203ENST00000395881 UTRNP46939 3433 aa17.52■□□□□ 0.4
RTFDC1-203ENST00000395881 MCCP23508 829 aa17.52■□□□□ 0.39
RTFDC1-203ENST00000395881 AACSQ86V21 672 aa17.52■□□□□ 0.39
RTFDC1-203ENST00000395881 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
RTFDC1-203ENST00000395881 CHD4Q14839 1912 aa17.51■□□□□ 0.39
RTFDC1-203ENST00000395881 NFKBIBQ15653 356 aa17.51■□□□□ 0.39
RTFDC1-203ENST00000395881 PRR5LQ6MZQ0 368 aa17.51■□□□□ 0.39
RTFDC1-203ENST00000395881 CCDC24Q8N4L8 307 aa17.51■□□□□ 0.39
RTFDC1-203ENST00000395881 EAF2Q96CJ1 260 aaPredicted RBP17.51■□□□□ 0.39
RTFDC1-203ENST00000395881 NIP7Q9Y221 180 aaKnown RBP eCLIP17.51■□□□□ 0.39
RTFDC1-203ENST00000395881 K7ELQ4 463 aaPredicted RBP17.5■□□□□ 0.39
RTFDC1-203ENST00000395881 CHRNA5P30532 468 aa17.5■□□□□ 0.39
RTFDC1-203ENST00000395881 GIGYF2Q6Y7W6 1299 aaKnown RBP17.5■□□□□ 0.39
RTFDC1-203ENST00000395881 EVI5LQ96CN4 794 aa17.5■□□□□ 0.39
RTFDC1-203ENST00000395881 PLA2G12BQ9BX93 195 aa17.5■□□□□ 0.39
RTFDC1-203ENST00000395881 FBXO3Q9UK99 471 aa17.5■□□□□ 0.39
RTFDC1-203ENST00000395881 CIZ1Q9ULV3 898 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms