RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 CCDC173Q0VFZ6 552 aa13.51□□□□□ -0.25
RAE1-203ENST00000395841 NSFL1CQ9UNZ2 370 aaKnown RBP13.51□□□□□ -0.25
RAE1-203ENST00000395841 ZNF330Q9Y3S2 320 aaPredicted RBP13.51□□□□□ -0.25
RAE1-203ENST00000395841 CCDC9Q9Y3X0 531 aaKnown RBP13.51□□□□□ -0.25
RAE1-203ENST00000395841 STX6O43752 255 aa13.5□□□□□ -0.25
RAE1-203ENST00000395841 LARGE1O95461 756 aa13.5□□□□□ -0.25
RAE1-203ENST00000395841 A1BGP04217 495 aa13.5□□□□□ -0.25
RAE1-203ENST00000395841 ANP32BQ92688 251 aaKnown RBP13.5□□□□□ -0.25
RAE1-203ENST00000395841 SYT1P21579 422 aa13.5□□□□□ -0.25
RAE1-203ENST00000395841 CCDC191Q8NCU4 936 aa13.5□□□□□ -0.25
RAE1-203ENST00000395841 HAUS7Q99871 368 aa13.5□□□□□ -0.25
RAE1-203ENST00000395841 HMG20BQ9P0W2 317 aa13.5□□□□□ -0.25
RAE1-203ENST00000395841 ASAP1Q9ULH1 1129 aa13.5□□□□□ -0.25
RAE1-203ENST00000395841 LRSAM1Q6UWE0 723 aa13.49□□□□□ -0.25
RAE1-203ENST00000395841 ZNF589Q86UQ0 364 aaPredicted RBP13.49□□□□□ -0.25
RAE1-203ENST00000395841 CCDC83Q8IWF9 413 aa13.49□□□□□ -0.25
RAE1-203ENST00000395841 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
RAE1-203ENST00000395841 EDC3Q96F86 508 aaKnown RBP13.49□□□□□ -0.25
RAE1-203ENST00000395841 PPP1R9BQ96SB3 815 aa13.49□□□□□ -0.25
RAE1-203ENST00000395841 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
RAE1-203ENST00000395841 NUP188Q5SRE5 1749 aa13.49□□□□□ -0.25
RAE1-203ENST00000395841 TAF5LO75529 589 aa13.49□□□□□ -0.25
RAE1-203ENST00000395841 PRIM1P49642 420 aaKnown RBP13.49□□□□□ -0.25
RAE1-203ENST00000395841 TSGA10IPQ3SY00 556 aa13.49□□□□□ -0.25
RAE1-203ENST00000395841 TRIM44Q96DX7 344 aaPredicted RBP13.49□□□□□ -0.25
RAE1-203ENST00000395841 ALDH8A1Q9H2A2 487 aaPredicted RBP13.49□□□□□ -0.25
RAE1-203ENST00000395841 ANKRD1Q15327 319 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 USPL1Q5W0Q7 1092 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 USP48Q86UV5 1035 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
RAE1-203ENST00000395841 ZBTB3Q9H5J0 574 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 GPR108Q9NPR9 543 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 CHMP3Q9Y3E7 222 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 GJB2P29033 226 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 ME3Q16798 604 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 BLOC1S2Q6QNY1 142 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 ATG9AQ7Z3C6 839 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 RBSNQ9H1K0 784 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 ATP6V1DQ9Y5K8 247 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
RAE1-203ENST00000395841 F13A1P00488 732 aa13.47□□□□□ -0.25
RAE1-203ENST00000395841 RPS6KB1P23443 525 aa13.47□□□□□ -0.25
RAE1-203ENST00000395841 IL15P40933 162 aaPredicted RBP13.47□□□□□ -0.25
RAE1-203ENST00000395841 FOXD4L6Q3SYB3 417 aaPredicted RBP13.47□□□□□ -0.25
RAE1-203ENST00000395841 FOXD4L3Q6VB84 417 aaPredicted RBP13.47□□□□□ -0.25
RAE1-203ENST00000395841 SYCE3A1L190 88 aa13.47□□□□□ -0.25
RAE1-203ENST00000395841 PIGBQ92521 554 aa13.47□□□□□ -0.25
RAE1-203ENST00000395841 DNAJC2Q99543 621 aaKnown RBP13.47□□□□□ -0.25
RAE1-203ENST00000395841 ATG3Q9NT62 314 aa13.47□□□□□ -0.25
RAE1-203ENST00000395841 TPCN1Q9ULQ1 816 aa13.47□□□□□ -0.25
RAE1-203ENST00000395841 TJP1Q07157 1748 aa13.47□□□□□ -0.25
RAE1-203ENST00000395841 TOM1O60784 492 aa13.46□□□□□ -0.25
RAE1-203ENST00000395841 ST3GAL1Q11201 340 aa13.46□□□□□ -0.25
RAE1-203ENST00000395841 KRT32Q14532 448 aa13.46□□□□□ -0.25
RAE1-203ENST00000395841 TICAM2Q86XR7 235 aa13.46□□□□□ -0.25
RAE1-203ENST00000395841 ACSBG1Q96GR2 724 aa13.46□□□□□ -0.25
RAE1-203ENST00000395841 GDPD2Q9HCC8 539 aa13.46□□□□□ -0.25
RAE1-203ENST00000395841 TMOD3Q9NYL9 352 aa13.46□□□□□ -0.25
RAE1-203ENST00000395841 ZNF609O15014 1411 aa13.46□□□□□ -0.25
RAE1-203ENST00000395841 GADD45BO75293 160 aaPredicted RBP13.46□□□□□ -0.25
RAE1-203ENST00000395841 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.25
RAE1-203ENST00000395841 CLCN1P35523 988 aa13.46□□□□□ -0.25
RAE1-203ENST00000395841 C8orf37Q96NL8 207 aa13.46□□□□□ -0.25
RAE1-203ENST00000395841 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.26
RAE1-203ENST00000395841 EP400Q96L91 3159 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 ESPNB1AK53 854 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 CIAO1O76071 339 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 MCMDC2Q4G0Z9 681 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 KBTBD3Q8NAB2 608 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 ISCA1Q9BUE6 129 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 NDUFB9Q9Y6M9 179 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 U3KPZ7 1027 aaPredicted RBP13.45□□□□□ -0.26
RAE1-203ENST00000395841 PHLPP1O60346 1717 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 EYA2O00167 538 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 PHF14O94880 888 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 NECAB1Q8N987 351 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 TEX13AQ9BXU3 409 aaPredicted RBP13.45□□□□□ -0.26
RAE1-203ENST00000395841 MTMR6Q9Y217 621 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 CNPY2Q9Y2B0 182 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 TAF6LQ9Y6J9 622 aa13.45□□□□□ -0.26
RAE1-203ENST00000395841 DDX46Q7L014 1031 aaKnown RBP13.44□□□□□ -0.26
RAE1-203ENST00000395841 VSIG10Q8N0Z9 540 aa13.44□□□□□ -0.26
RAE1-203ENST00000395841 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
RAE1-203ENST00000395841 PALLDQ8WX93 1383 aa13.44□□□□□ -0.26
RAE1-203ENST00000395841 SH3TC1Q8TE82 1336 aa13.44□□□□□ -0.26
RAE1-203ENST00000395841 TCIRG1Q13488 830 aa13.44□□□□□ -0.26
RAE1-203ENST00000395841 COL9A3Q14050 684 aaPredicted RBP13.44□□□□□ -0.26
RAE1-203ENST00000395841 TRIM28Q13263 835 aaKnown RBP13.43□□□□□ -0.26
RAE1-203ENST00000395841 TOB2Q14106 344 aaPredicted RBP13.43□□□□□ -0.26
RAE1-203ENST00000395841 FAM182BQ5T319 152 aa13.43□□□□□ -0.26
RAE1-203ENST00000395841 TOGARAM1Q9Y4F4 1720 aa13.43□□□□□ -0.26
RAE1-203ENST00000395841 TIMM10P62072 90 aa13.43□□□□□ -0.26
RAE1-203ENST00000395841 UBE2HP62256 183 aa13.43□□□□□ -0.26
RAE1-203ENST00000395841 CSPP1Q1MSJ5 1256 aa13.43□□□□□ -0.26
RAE1-203ENST00000395841 LRRC24Q50LG9 513 aa13.43□□□□□ -0.26
RAE1-203ENST00000395841 PAG1Q9NWQ8 432 aa13.43□□□□□ -0.26
RAE1-203ENST00000395841 AHDC1Q5TGY3 1603 aaPredicted RBP13.43□□□□□ -0.26
RAE1-203ENST00000395841 EXOC5O00471 708 aa13.43□□□□□ -0.26
RAE1-203ENST00000395841 CCDC129Q6ZRS4 1044 aa13.43□□□□□ -0.26
RAE1-203ENST00000395841 DNAJC10Q8IXB1 793 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms