RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 TTC39BQ5VTQ0 682 aaPredicted RBP8.92□□□□□ -0.98
CDKN3-203ENST00000395577 FIGNL1Q6PIW4 674 aa8.92□□□□□ -0.98
CDKN3-203ENST00000395577 C1orf127Q8N9H9 656 aa8.92□□□□□ -0.98
CDKN3-203ENST00000395577 CHRDQ9H2X0 955 aa8.92□□□□□ -0.98
CDKN3-203ENST00000395577 METTL5Q9NRN9 209 aaKnown RBP8.92□□□□□ -0.98
CDKN3-203ENST00000395577 CNTN3Q9P232 1028 aa8.92□□□□□ -0.98
CDKN3-203ENST00000395577 GIPC1O14908 333 aa8.91□□□□□ -0.98
CDKN3-203ENST00000395577 EREGO14944 169 aa8.91□□□□□ -0.98
CDKN3-203ENST00000395577 ST8SIA5O15466 376 aa8.91□□□□□ -0.98
CDKN3-203ENST00000395577 FAM157BP0CG42 384 aa8.91□□□□□ -0.98
CDKN3-203ENST00000395577 KCNQ4P56696 695 aa8.91□□□□□ -0.98
CDKN3-203ENST00000395577 ZC3H6P61129 1189 aaKnown RBP8.91□□□□□ -0.98
CDKN3-203ENST00000395577 SFSWAPQ12872 951 aaKnown RBP8.91□□□□□ -0.98
CDKN3-203ENST00000395577 RNF34Q969K3 372 aa8.91□□□□□ -0.98
CDKN3-203ENST00000395577 C8orf37Q96NL8 207 aa8.91□□□□□ -0.98
CDKN3-203ENST00000395577 NPHS2Q9NP85 383 aa8.91□□□□□ -0.98
CDKN3-203ENST00000395577 AAASQ9NRG9 546 aa8.91□□□□□ -0.98
CDKN3-203ENST00000395577 KHNYNO15037 678 aaKnown RBP8.9□□□□□ -0.98
CDKN3-203ENST00000395577 SASH3O75995 380 aa8.9□□□□□ -0.98
CDKN3-203ENST00000395577 ZNF76P36508 570 aa8.9□□□□□ -0.98
CDKN3-203ENST00000395577 FANCCQ00597 558 aa8.9□□□□□ -0.98
CDKN3-203ENST00000395577 PTSQ03393 145 aa8.9□□□□□ -0.98
CDKN3-203ENST00000395577 GALNT12Q8IXK2 581 aa8.9□□□□□ -0.98
CDKN3-203ENST00000395577 PMEPA1Q969W9 287 aa8.9□□□□□ -0.98
CDKN3-203ENST00000395577 CRELD1Q96HD1 420 aa8.9□□□□□ -0.98
CDKN3-203ENST00000395577 NUCKS1Q9H1E3 243 aaKnown RBP8.9□□□□□ -0.98
CDKN3-203ENST00000395577 C12orf49Q9H741 205 aa8.9□□□□□ -0.98
CDKN3-203ENST00000395577 PCDHGC4Q9Y5F7 938 aa8.9□□□□□ -0.98
CDKN3-203ENST00000395577 DCDC2BA2VCK2 349 aa8.89□□□□□ -0.99
CDKN3-203ENST00000395577 SLC35F4A4IF30 521 aa8.89□□□□□ -0.99
CDKN3-203ENST00000395577 THBS1P07996 1170 aa8.89□□□□□ -0.99
CDKN3-203ENST00000395577 CTSHP09668 335 aa8.89□□□□□ -0.99
CDKN3-203ENST00000395577 CES1P23141 567 aa8.89□□□□□ -0.99
CDKN3-203ENST00000395577 CCINQ13939 588 aa8.89□□□□□ -0.99
CDKN3-203ENST00000395577 KRT25Q7Z3Z0 450 aa8.89□□□□□ -0.99
CDKN3-203ENST00000395577 METTL16Q86W50 562 aaKnown RBP8.89□□□□□ -0.99
CDKN3-203ENST00000395577 NT5DC4Q86YG4 428 aa8.89□□□□□ -0.99
CDKN3-203ENST00000395577 OSBPL7Q9BZF2 842 aa8.89□□□□□ -0.99
CDKN3-203ENST00000395577 H7C1W4 665 aa8.88□□□□□ -0.99
CDKN3-203ENST00000395577 EFSO43281 561 aa8.88□□□□□ -0.99
CDKN3-203ENST00000395577 GADD45BO75293 160 aaPredicted RBP8.88□□□□□ -0.99
CDKN3-203ENST00000395577 GSX2Q9BZM3 304 aa8.88□□□□□ -0.99
CDKN3-203ENST00000395577 DACH1Q9UI36 760 aa8.88□□□□□ -0.99
CDKN3-203ENST00000395577 TARSP26639 723 aaKnown RBP8.87□□□□□ -0.99
CDKN3-203ENST00000395577 TNP2Q05952 138 aa8.87□□□□□ -0.99
CDKN3-203ENST00000395577 LAPTM4AQ15012 233 aa8.87□□□□□ -0.99
CDKN3-203ENST00000395577 CYP2E1P05181 493 aaPredicted RBP8.86□□□□□ -0.99
CDKN3-203ENST00000395577 RARAP10276 462 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 MAPTP10636 758 aaKnown RBP8.86□□□□□ -0.99
CDKN3-203ENST00000395577 RAD51AP2Q09MP3 1159 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 LAMC2Q13753 1193 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 UBAP2LQ14157 1087 aaKnown RBP8.86□□□□□ -0.99
CDKN3-203ENST00000395577 DBN1Q16643 649 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 NAALADL2Q58DX5 795 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 NXPE4Q6UWF7 544 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 CCDC155Q8N6L0 562 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 PNMA5Q96PV4 448 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 BCO2Q9BYV7 579 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 STRN4Q9NRL3 753 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 FAM8A1Q9UBU6 413 aa8.86□□□□□ -0.99
CDKN3-203ENST00000395577 PHF20L1A8MW92 1017 aa8.85□□□□□ -0.99
CDKN3-203ENST00000395577 MMP20O60882 483 aa8.85□□□□□ -0.99
CDKN3-203ENST00000395577 TRIM22Q8IYM9 498 aa8.85□□□□□ -0.99
CDKN3-203ENST00000395577 SRCIN1Q9C0H9 1055 aa8.85□□□□□ -0.99
CDKN3-203ENST00000395577 SUV39H2Q9H5I1 410 aa8.85□□□□□ -0.99
CDKN3-203ENST00000395577 SENP2Q9HC62 589 aa8.85□□□□□ -0.99
CDKN3-203ENST00000395577 CUEDC1Q9NWM3 386 aaPredicted RBP8.85□□□□□ -0.99
CDKN3-203ENST00000395577 MARK1Q9P0L2 795 aa8.85□□□□□ -0.99
CDKN3-203ENST00000395577 KANSL3Q9P2N6 904 aa8.85□□□□□ -0.99
CDKN3-203ENST00000395577 BNIP3LO60238 219 aa8.84□□□□□ -0.99
CDKN3-203ENST00000395577 USP17L7P0C7H9 530 aa8.84□□□□□ -0.99
CDKN3-203ENST00000395577 VEGFBP49765 207 aa8.84□□□□□ -0.99
CDKN3-203ENST00000395577 GRIN2CQ14957 1233 aa8.84□□□□□ -0.99
CDKN3-203ENST00000395577 OR13H1Q8NG92 308 aa8.84□□□□□ -0.99
CDKN3-203ENST00000395577 KIFC2Q96AC6 838 aa8.84□□□□□ -0.99
CDKN3-203ENST00000395577 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.84□□□□□ -0.99
CDKN3-203ENST00000395577 CCDC180Q9P1Z9 1646 aa8.83□□□□□ -1
CDKN3-203ENST00000395577 EDN3P14138 238 aa8.83□□□□□ -1
CDKN3-203ENST00000395577 NFKB1P19838 968 aa8.83□□□□□ -1
CDKN3-203ENST00000395577 GRM2Q14416 872 aa8.83□□□□□ -1
CDKN3-203ENST00000395577 TAF1CQ15572 869 aaPredicted RBP8.83□□□□□ -1
CDKN3-203ENST00000395577 KIAA0319Q5VV43 1072 aa8.83□□□□□ -1
CDKN3-203ENST00000395577 TGIF2Q9GZN2 237 aa8.83□□□□□ -1
CDKN3-203ENST00000395577 NDFIP2Q9NV92 336 aa8.83□□□□□ -1
CDKN3-203ENST00000395577 ZFATQ9P243 1243 aa8.83□□□□□ -1
CDKN3-203ENST00000395577 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.83□□□□□ -1
CDKN3-203ENST00000395577 USP31Q70CQ4 1352 aa8.83□□□□□ -1
CDKN3-203ENST00000395577 SPEM2Q0P670 501 aa8.82□□□□□ -1
CDKN3-203ENST00000395577 MEI1Q5TIA1 1274 aa8.82□□□□□ -1
CDKN3-203ENST00000395577 SREK1Q8WXA9 508 aaKnown RBP8.82□□□□□ -1
CDKN3-203ENST00000395577 ABHD17AQ96GS6 310 aa8.82□□□□□ -1
CDKN3-203ENST00000395577 GMCL1Q96IK5 515 aa8.82□□□□□ -1
CDKN3-203ENST00000395577 EHD4Q9H223 541 aa8.82□□□□□ -1
CDKN3-203ENST00000395577 CCSER2Q9H7U1 834 aa8.82□□□□□ -1
CDKN3-203ENST00000395577 LATS2Q9NRM7 1088 aa8.82□□□□□ -1
CDKN3-203ENST00000395577 PPP4R2Q9NY27 417 aa8.82□□□□□ -1
CDKN3-203ENST00000395577 SALL4Q9UJQ4 1053 aa8.82□□□□□ -1
CDKN3-203ENST00000395577 A0A1W2PP55 124 aa8.81□□□□□ -1
CDKN3-203ENST00000395577 PSAPP07602 524 aa8.81□□□□□ -1
CDKN3-203ENST00000395577 CD33P20138 364 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms