RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 ERFEQ4G0M1 354 aa23.79■■□□□ 1.4
LMNB1-202ENST00000395354 PRR5LQ6MZQ0 368 aa23.79■■□□□ 1.4
LMNB1-202ENST00000395354 LRRCC1Q9C099 1032 aa23.79■■□□□ 1.4
LMNB1-202ENST00000395354 CASP7P55210 303 aa23.78■■□□□ 1.4
LMNB1-202ENST00000395354 CCDC24Q8N4L8 307 aa23.78■■□□□ 1.4
LMNB1-202ENST00000395354 UPF2Q9HAU5 1272 aaKnown RBP23.78■■□□□ 1.4
LMNB1-202ENST00000395354 IRS4O14654 1257 aaPredicted RBP23.78■■□□□ 1.4
LMNB1-202ENST00000395354 HSP90AB4PQ58FF6 505 aa23.78■■□□□ 1.4
LMNB1-202ENST00000395354 DDRGK1Q96HY6 314 aa23.78■■□□□ 1.4
LMNB1-202ENST00000395354 SPON1Q9HCB6 807 aa23.78■■□□□ 1.4
LMNB1-202ENST00000395354 SRGAP3O43295 1099 aa23.77■■□□□ 1.4
LMNB1-202ENST00000395354 SLC10A5Q5PT55 438 aa23.77■■□□□ 1.4
LMNB1-202ENST00000395354 EXOC6BQ9Y2D4 811 aa23.77■■□□□ 1.4
LMNB1-202ENST00000395354 CDHR2Q9BYE9 1310 aa23.77■■□□□ 1.4
LMNB1-202ENST00000395354 HCLS1P14317 486 aaPredicted RBP23.76■■□□□ 1.39
LMNB1-202ENST00000395354 ST5P78524 1137 aa23.76■■□□□ 1.39
LMNB1-202ENST00000395354 OSBPL3Q9H4L5 887 aa23.76■■□□□ 1.39
LMNB1-202ENST00000395354 SEC24BO95487 1268 aa23.75■■□□□ 1.39
LMNB1-202ENST00000395354 SGIP1Q9BQI5 828 aa23.75■■□□□ 1.39
LMNB1-202ENST00000395354 SMARCA5O60264 1052 aaPredicted RBP23.74■■□□□ 1.39
LMNB1-202ENST00000395354 EIF5BO60841 1220 aaKnown RBP23.74■■□□□ 1.39
LMNB1-202ENST00000395354 HSP90B1P14625 803 aaKnown RBP23.74■■□□□ 1.39
LMNB1-202ENST00000395354 PTGER2P43116 358 aa23.74■■□□□ 1.39
LMNB1-202ENST00000395354 TTC22Q5TAA0 569 aa23.74■■□□□ 1.39
LMNB1-202ENST00000395354 C16orf71Q8IYS4 520 aaPredicted RBP23.74■■□□□ 1.39
LMNB1-202ENST00000395354 SUCLG2Q96I99 432 aa23.74■■□□□ 1.39
LMNB1-202ENST00000395354 NOP58Q9Y2X3 529 aaKnown RBP23.74■■□□□ 1.39
LMNB1-202ENST00000395354 ABCC12Q96J65 1359 aa23.73■■□□□ 1.39
LMNB1-202ENST00000395354 APBB1O00213 710 aa23.73■■□□□ 1.39
LMNB1-202ENST00000395354 KAZALD1Q96I82 304 aa23.73■■□□□ 1.39
LMNB1-202ENST00000395354 NRXN2Q9P2S2 1712 aa23.72■■□□□ 1.39
LMNB1-202ENST00000395354 PDE8AO60658 829 aa23.72■■□□□ 1.39
LMNB1-202ENST00000395354 SURF6O75683 361 aaKnown RBP23.72■■□□□ 1.39
LMNB1-202ENST00000395354 PLA2G12BQ9BX93 195 aa23.72■■□□□ 1.39
LMNB1-202ENST00000395354 SALL3Q9BXA9 1300 aa23.71■■□□□ 1.39
LMNB1-202ENST00000395354 EPHA10Q5JZY3 1008 aa23.71■■□□□ 1.39
LMNB1-202ENST00000395354 NLRP3Q96P20 1036 aa23.71■■□□□ 1.39
LMNB1-202ENST00000395354 BRIP1Q9BX63 1249 aa23.71■■□□□ 1.39
LMNB1-202ENST00000395354 FOXO4P98177 505 aa23.7■■□□□ 1.38
LMNB1-202ENST00000395354 KIF1BPQ96EK5 621 aa23.7■■□□□ 1.38
LMNB1-202ENST00000395354 GSPT1P15170 499 aaKnown RBP23.69■■□□□ 1.38
LMNB1-202ENST00000395354 OTUD7AQ8TE49 926 aaPredicted RBP23.69■■□□□ 1.38
LMNB1-202ENST00000395354 BICC1Q9H694 974 aaKnown RBP23.69■■□□□ 1.38
LMNB1-202ENST00000395354 AOX1Q06278 1338 aa23.69■■□□□ 1.38
LMNB1-202ENST00000395354 PDE1AP54750 535 aa23.69■■□□□ 1.38
LMNB1-202ENST00000395354 TBC1D32Q96NH3 1257 aa23.69■■□□□ 1.38
LMNB1-202ENST00000395354 STAP2Q9UGK3 403 aa23.69■■□□□ 1.38
LMNB1-202ENST00000395354 CDC45O75419 566 aa23.68■■□□□ 1.38
LMNB1-202ENST00000395354 C3orf67Q6ZVT6 689 aa23.68■■□□□ 1.38
LMNB1-202ENST00000395354 ERC1Q8IUD2 1116 aa23.68■■□□□ 1.38
LMNB1-202ENST00000395354 RHPN1Q8TCX5 695 aa23.68■■□□□ 1.38
LMNB1-202ENST00000395354 PDE6BP35913 854 aa23.67■■□□□ 1.38
LMNB1-202ENST00000395354 CTSWP56202 376 aa23.67■■□□□ 1.38
LMNB1-202ENST00000395354 LMBR1LQ6UX01 489 aa23.67■■□□□ 1.38
LMNB1-202ENST00000395354 DDX60Q8IY21 1712 aaKnown RBP23.67■■□□□ 1.38
LMNB1-202ENST00000395354 TTLL11Q8NHH1 800 aa23.67■■□□□ 1.38
LMNB1-202ENST00000395354 CSF1RP07333 972 aa23.66■■□□□ 1.38
LMNB1-202ENST00000395354 SF3B3Q15393 1217 aaKnown RBP23.66■■□□□ 1.38
LMNB1-202ENST00000395354 RABL6Q3YEC7 729 aaPredicted RBP23.66■■□□□ 1.38
LMNB1-202ENST00000395354 RIC1Q4ADV7 1423 aa23.66■■□□□ 1.38
LMNB1-202ENST00000395354 MX1P20591 662 aa23.65■■□□□ 1.38
LMNB1-202ENST00000395354 CCDC85AQ96PX6 553 aaPredicted RBP23.65■■□□□ 1.38
LMNB1-202ENST00000395354 KLRG2A4D1S0 409 aaPredicted RBP23.65■■□□□ 1.38
LMNB1-202ENST00000395354 PPP1R1BQ9UD71 204 aaPredicted RBP23.65■■□□□ 1.38
LMNB1-202ENST00000395354 CHMP3Q9Y3E7 222 aa23.65■■□□□ 1.38
LMNB1-202ENST00000395354 CCDC152Q4G0S7 254 aa23.64■■□□□ 1.37
LMNB1-202ENST00000395354 TBC1D9Q6ZT07 1266 aa23.64■■□□□ 1.37
LMNB1-202ENST00000395354 C10orf71Q711Q0 1435 aa23.63■■□□□ 1.37
LMNB1-202ENST00000395354 ANKRD31Q8N7Z5 1873 aa23.63■■□□□ 1.37
LMNB1-202ENST00000395354 LAMB2P55268 1798 aa23.63■■□□□ 1.37
LMNB1-202ENST00000395354 CRY2Q49AN0 593 aa23.63■■□□□ 1.37
LMNB1-202ENST00000395354 MYH3P11055 1940 aa23.63■■□□□ 1.37
LMNB1-202ENST00000395354 MFAP1P55081 439 aaKnown RBP23.62■■□□□ 1.37
LMNB1-202ENST00000395354 KLHL34Q8N239 644 aa23.62■■□□□ 1.37
LMNB1-202ENST00000395354 TNRC6CQ9HCJ0 1690 aaKnown RBP23.62■■□□□ 1.37
LMNB1-202ENST00000395354 H0YIN7 160 aa23.61■■□□□ 1.37
LMNB1-202ENST00000395354 SDSP20132 328 aa23.61■■□□□ 1.37
LMNB1-202ENST00000395354 OS9Q13438 667 aaPredicted RBP23.61■■□□□ 1.37
LMNB1-202ENST00000395354 C2CD5Q86YS7 1000 aa23.61■■□□□ 1.37
LMNB1-202ENST00000395354 GREM2Q9H772 168 aa23.61■■□□□ 1.37
LMNB1-202ENST00000395354 CD2APQ9Y5K6 639 aa23.61■■□□□ 1.37
LMNB1-202ENST00000395354 SRGNP10124 158 aa23.61■■□□□ 1.37
LMNB1-202ENST00000395354 CASC1Q6TDU7 716 aa23.61■■□□□ 1.37
LMNB1-202ENST00000395354 RPGRQ92834 1020 aaKnown RBP23.61■■□□□ 1.37
LMNB1-202ENST00000395354 C22orf23Q9BZE7 217 aa23.61■■□□□ 1.37
LMNB1-202ENST00000395354 IFIT5Q13325 482 aaKnown RBP23.6■■□□□ 1.37
LMNB1-202ENST00000395354 CCDC57Q2TAC2 916 aa23.6■■□□□ 1.37
LMNB1-202ENST00000395354 DDX46Q7L014 1031 aaKnown RBP23.6■■□□□ 1.37
LMNB1-202ENST00000395354 IL1RAPL2Q9NP60 686 aa23.6■■□□□ 1.37
LMNB1-202ENST00000395354 ITGA6P23229 1130 aa23.59■■□□□ 1.37
LMNB1-202ENST00000395354 CHRNA5P30532 468 aa23.59■■□□□ 1.37
LMNB1-202ENST00000395354 TGFB2P61812 414 aa23.59■■□□□ 1.37
LMNB1-202ENST00000395354 G3BP1Q13283 466 aaKnown RBP eCLIP23.59■■□□□ 1.373e-7■■■■□ 25.5
LMNB1-202ENST00000395354 CLASRPQ8N2M8 674 aaKnown RBP23.59■■□□□ 1.37
LMNB1-202ENST00000395354 BCL11AQ9H165 835 aa23.59■■□□□ 1.37
LMNB1-202ENST00000395354 COPRSQ9NQ92 184 aa23.59■■□□□ 1.37
LMNB1-202ENST00000395354 SEC31BQ9NQW1 1179 aa23.59■■□□□ 1.37
LMNB1-202ENST00000395354 ANKRD18BA2A2Z9 1011 aa23.58■■□□□ 1.37
LMNB1-202ENST00000395354 NPR1P16066 1061 aa23.58■■□□□ 1.37
LMNB1-202ENST00000395354 HOXA10P31260 410 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms