RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 TJP1Q07157 1748 aa10.68□□□□□ -0.7
HERC4-203ENST00000395185 SRGNP10124 158 aa10.68□□□□□ -0.7
HERC4-203ENST00000395185 TRIM28Q13263 835 aaKnown RBP10.68□□□□□ -0.7
HERC4-203ENST00000395185 ERFEQ4G0M1 354 aa10.68□□□□□ -0.7
HERC4-203ENST00000395185 FTSJ3Q8IY81 847 aaKnown RBP10.68□□□□□ -0.7
HERC4-203ENST00000395185 RBM17Q96I25 401 aaKnown RBP10.68□□□□□ -0.7
HERC4-203ENST00000395185 METTL22Q9BUU2 404 aaPredicted RBP10.68□□□□□ -0.7
HERC4-203ENST00000395185 MYH14Q7Z406 1995 aaKnown RBP10.68□□□□□ -0.7
HERC4-203ENST00000395185 PXDNLA1KZ92 1463 aa10.68□□□□□ -0.7
HERC4-203ENST00000395185 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
HERC4-203ENST00000395185 KLRG2A4D1S0 409 aaPredicted RBP10.67□□□□□ -0.7
HERC4-203ENST00000395185 ALDH1L1O75891 902 aa10.67□□□□□ -0.7
HERC4-203ENST00000395185 NEXNQ0ZGT2 675 aa10.67□□□□□ -0.7
HERC4-203ENST00000395185 SLC10A5Q5PT55 438 aa10.67□□□□□ -0.7
HERC4-203ENST00000395185 NLRP10Q86W26 655 aa10.67□□□□□ -0.7
HERC4-203ENST00000395185 NUTM1Q86Y26 1132 aa10.67□□□□□ -0.7
HERC4-203ENST00000395185 LINS1Q8NG48 757 aa10.67□□□□□ -0.7
HERC4-203ENST00000395185 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
HERC4-203ENST00000395185 USP44Q9H0E7 712 aa10.67□□□□□ -0.7
HERC4-203ENST00000395185 CHMP4BQ9H444 224 aaKnown RBP10.67□□□□□ -0.7
HERC4-203ENST00000395185 MAP3K2Q9Y2U5 619 aa10.67□□□□□ -0.7
HERC4-203ENST00000395185 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
HERC4-203ENST00000395185 UTYO14607 1347 aa10.66□□□□□ -0.7
HERC4-203ENST00000395185 SH3TC1Q8TE82 1336 aa10.66□□□□□ -0.7
HERC4-203ENST00000395185 C21orf2O43822 256 aa10.66□□□□□ -0.7
HERC4-203ENST00000395185 IGKV5-2P06315 115 aa10.66□□□□□ -0.7
HERC4-203ENST00000395185 GRIPAP1Q4V328 841 aa10.66□□□□□ -0.7
HERC4-203ENST00000395185 CC2D2BQ6DHV5 1058 aa10.66□□□□□ -0.7
HERC4-203ENST00000395185 RTKN2Q8IZC4 609 aa10.66□□□□□ -0.7
HERC4-203ENST00000395185 ZNF784Q8NCA9 323 aaPredicted RBP10.66□□□□□ -0.7
HERC4-203ENST00000395185 ATP5J2-PTCD1G3V325 749 aa10.65□□□□□ -0.7
HERC4-203ENST00000395185 C9orf131Q5VYM1 1079 aa10.65□□□□□ -0.7
HERC4-203ENST00000395185 ITPRIPQ8IWB1 547 aa10.65□□□□□ -0.7
HERC4-203ENST00000395185 ISCA1Q9BUE6 129 aa10.65□□□□□ -0.7
HERC4-203ENST00000395185 SRCIN1Q9C0H9 1055 aa10.65□□□□□ -0.7
HERC4-203ENST00000395185 TUBGCP6Q96RT7 1819 aa10.65□□□□□ -0.71
HERC4-203ENST00000395185 C4AP0C0L4 1744 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 UBN2Q6ZU65 1347 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 NEURL1BA8MQ27 555 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 BBOX1O75936 387 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 NTSR2O95665 410 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 LMNB1P20700 586 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 HOXA10P31260 410 aaPredicted RBP10.64□□□□□ -0.71
HERC4-203ENST00000395185 PRPF40BQ6NWY9 871 aaKnown RBP10.64□□□□□ -0.71
HERC4-203ENST00000395185 DDX46Q7L014 1031 aaKnown RBP10.64□□□□□ -0.71
HERC4-203ENST00000395185 CCDC191Q8NCU4 936 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 CRAMP1Q96RY5 1269 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 MYD88Q99836 296 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 GPBP1L1Q9HC44 474 aaPredicted RBP10.64□□□□□ -0.71
HERC4-203ENST00000395185 CWC25Q9NXE8 425 aaPredicted RBP10.64□□□□□ -0.71
HERC4-203ENST00000395185 LAMB4A4D0S4 1761 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 COL24A1Q17RW2 1714 aa10.64□□□□□ -0.71
HERC4-203ENST00000395185 CASP7P55210 303 aa10.63□□□□□ -0.71
HERC4-203ENST00000395185 HDAC1Q13547 482 aaPredicted RBP10.63□□□□□ -0.71
HERC4-203ENST00000395185 GCKRQ14397 625 aa10.63□□□□□ -0.71
HERC4-203ENST00000395185 CRY2Q49AN0 593 aa10.63□□□□□ -0.71
HERC4-203ENST00000395185 CCDC93Q567U6 631 aa10.63□□□□□ -0.71
HERC4-203ENST00000395185 SLC4A10Q6U841 1118 aa10.63□□□□□ -0.71
HERC4-203ENST00000395185 SIRT2Q8IXJ6 389 aa10.63□□□□□ -0.71
HERC4-203ENST00000395185 MEIS3Q99687 375 aa10.63□□□□□ -0.71
HERC4-203ENST00000395185 RNF181Q9P0P0 153 aa10.63□□□□□ -0.71
HERC4-203ENST00000395185 KDM2BQ8NHM5 1336 aa10.62□□□□□ -0.71
HERC4-203ENST00000395185 H7C1W4 665 aa10.62□□□□□ -0.71
HERC4-203ENST00000395185 IRS4O14654 1257 aaPredicted RBP10.62□□□□□ -0.71
HERC4-203ENST00000395185 GNAI3P08754 354 aa10.62□□□□□ -0.71
HERC4-203ENST00000395185 HCLS1P14317 486 aaPredicted RBP10.62□□□□□ -0.71
HERC4-203ENST00000395185 DPY19L2Q6NUT2 758 aa10.62□□□□□ -0.71
HERC4-203ENST00000395185 IFNLR1Q8IU57 520 aaPredicted RBP10.62□□□□□ -0.71
HERC4-203ENST00000395185 ZBTB38Q8NAP3 1195 aaPredicted RBP10.62□□□□□ -0.71
HERC4-203ENST00000395185 FAM89AQ96GI7 184 aa10.62□□□□□ -0.71
HERC4-203ENST00000395185 TAOK3Q9H2K8 898 aa10.62□□□□□ -0.71
HERC4-203ENST00000395185 IGHDP01880 384 aa10.61□□□□□ -0.71
HERC4-203ENST00000395185 NBPF7P0C2Y1 421 aaPredicted RBP10.61□□□□□ -0.71
HERC4-203ENST00000395185 CWF19L2Q2TBE0 894 aaKnown RBP10.61□□□□□ -0.71
HERC4-203ENST00000395185 TMC4Q7Z404 712 aa10.61□□□□□ -0.71
HERC4-203ENST00000395185 RPAP2Q8IXW5 612 aaPredicted RBP10.61□□□□□ -0.71
HERC4-203ENST00000395185 ZNF526Q8TF50 670 aaPredicted RBP10.61□□□□□ -0.71
HERC4-203ENST00000395185 KAZALD1Q96I82 304 aa10.61□□□□□ -0.71
HERC4-203ENST00000395185 GRM8O00222 908 aa10.6□□□□□ -0.71
HERC4-203ENST00000395185 CLCN6P51797 869 aa10.6□□□□□ -0.71
HERC4-203ENST00000395185 NUBP1P53384 320 aa10.6□□□□□ -0.71
HERC4-203ENST00000395185 ATP8B2P98198 1209 aa10.6□□□□□ -0.71
HERC4-203ENST00000395185 MTX1Q13505 466 aa10.6□□□□□ -0.71
HERC4-203ENST00000395185 SF3B3Q15393 1217 aaKnown RBP10.6□□□□□ -0.71
HERC4-203ENST00000395185 RTL5Q5HYW3 569 aaPredicted RBP10.6□□□□□ -0.71
HERC4-203ENST00000395185 B4GALNT3Q6L9W6 998 aa10.6□□□□□ -0.71
HERC4-203ENST00000395185 ANKRD44Q8N8A2 993 aa10.6□□□□□ -0.71
HERC4-203ENST00000395185 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
HERC4-203ENST00000395185 ZC3H4Q9UPT8 1303 aaKnown RBP10.59□□□□□ -0.71
HERC4-203ENST00000395185 PPEF1O14829 653 aaPredicted RBP10.59□□□□□ -0.71
HERC4-203ENST00000395185 PDE8AO60658 829 aa10.59□□□□□ -0.71
HERC4-203ENST00000395185 GNAI2P04899 355 aa10.59□□□□□ -0.71
HERC4-203ENST00000395185 PCCAP05165 728 aaPredicted RBP10.59□□□□□ -0.71
HERC4-203ENST00000395185 FKBP4Q02790 459 aaKnown RBP eCLIP10.59□□□□□ -0.71
HERC4-203ENST00000395185 CCDC152Q4G0S7 254 aa10.59□□□□□ -0.71
HERC4-203ENST00000395185 CEP85Q6P2H3 762 aa10.59□□□□□ -0.71
HERC4-203ENST00000395185 C16orf71Q8IYS4 520 aaPredicted RBP10.59□□□□□ -0.71
HERC4-203ENST00000395185 SYNE4Q8N205 404 aa10.59□□□□□ -0.71
HERC4-203ENST00000395185 SUPT20HQ8NEM7 779 aa10.59□□□□□ -0.71
HERC4-203ENST00000395185 C7orf43Q8WVR3 580 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms