RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 VPS72Q15906 364 aa14.64□□□□□ -0.07
RTN1-203ENST00000395090 ALDH1L2Q3SY69 923 aa14.64□□□□□ -0.07
RTN1-203ENST00000395090 KDM6AO15550 1401 aaPredicted RBP14.64□□□□□ -0.07
RTN1-203ENST00000395090 TEFQ10587 303 aa14.63□□□□□ -0.07
RTN1-203ENST00000395090 TWISTNBQ3B726 338 aaPredicted RBP14.63□□□□□ -0.07
RTN1-203ENST00000395090 SNRKQ9NRH2 765 aa14.63□□□□□ -0.07
RTN1-203ENST00000395090 SSH1Q8WYL5 1049 aa14.63□□□□□ -0.07
RTN1-203ENST00000395090 SLC52A2Q9HAB3 445 aa14.63□□□□□ -0.07
RTN1-203ENST00000395090 THSD4Q6ZMP0 1018 aa14.62□□□□□ -0.07
RTN1-203ENST00000395090 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.62□□□□□ -0.07
RTN1-203ENST00000395090 WBP1LQ9NX94 342 aa14.62□□□□□ -0.07
RTN1-203ENST00000395090 SLC27A5Q9Y2P5 690 aa14.62□□□□□ -0.07
RTN1-203ENST00000395090 SOS1Q07889 1333 aaPredicted RBP14.62□□□□□ -0.07
RTN1-203ENST00000395090 BTBD11A6QL63 1104 aa14.61□□□□□ -0.07
RTN1-203ENST00000395090 ERVV-2B6SEH9 535 aa14.61□□□□□ -0.07
RTN1-203ENST00000395090 EXOC5O00471 708 aa14.61□□□□□ -0.07
RTN1-203ENST00000395090 PLIN1O60240 522 aa14.61□□□□□ -0.07
RTN1-203ENST00000395090 Q3C1V9 767 aa14.61□□□□□ -0.07
RTN1-203ENST00000395090 KCTD12Q96CX2 325 aaKnown RBP14.61□□□□□ -0.07
RTN1-203ENST00000395090 USP21Q9UK80 565 aa14.61□□□□□ -0.07
RTN1-203ENST00000395090 SCN11AQ9UI33 1791 aa14.61□□□□□ -0.07
RTN1-203ENST00000395090 ELL2O00472 640 aaPredicted RBP14.6□□□□□ -0.07
RTN1-203ENST00000395090 EIF4A1P60842 406 aaKnown RBP14.6□□□□□ -0.07
RTN1-203ENST00000395090 NFATC2IPQ8NCF5 419 aa14.6□□□□□ -0.07
RTN1-203ENST00000395090 DDX54Q8TDD1 881 aaKnown RBP14.6□□□□□ -0.07
RTN1-203ENST00000395090 PCDHB3Q9Y5E6 796 aa14.6□□□□□ -0.07
RTN1-203ENST00000395090 MRC1P22897 1456 aa14.6□□□□□ -0.07
RTN1-203ENST00000395090 IRX6P78412 446 aaPredicted RBP14.59□□□□□ -0.07
RTN1-203ENST00000395090 KRT24Q2M2I5 525 aa14.59□□□□□ -0.07
RTN1-203ENST00000395090 SYMPKQ92797 1274 aaKnown RBP14.59□□□□□ -0.07
RTN1-203ENST00000395090 CLUAP1Q96AJ1 413 aa14.59□□□□□ -0.07
RTN1-203ENST00000395090 SHANK3Q9BYB0 1731 aa14.59□□□□□ -0.07
RTN1-203ENST00000395090 HEG1Q9ULI3 1381 aa14.59□□□□□ -0.07
RTN1-203ENST00000395090 MEX3CQ5U5Q3 659 aaKnown RBP14.59□□□□□ -0.07
RTN1-203ENST00000395090 SIPA1L3O60292 1781 aaPredicted RBP14.58□□□□□ -0.08
RTN1-203ENST00000395090 USP17L8P0C7I0 530 aa14.58□□□□□ -0.08
RTN1-203ENST00000395090 CABP4P57796 275 aa14.58□□□□□ -0.08
RTN1-203ENST00000395090 PDE3AQ14432 1141 aa14.58□□□□□ -0.08
RTN1-203ENST00000395090 HELBQ8NG08 1087 aaPredicted RBP14.58□□□□□ -0.08
RTN1-203ENST00000395090 SMC4Q9NTJ3 1288 aa14.58□□□□□ -0.08
RTN1-203ENST00000395090 CCDC9Q9Y3X0 531 aaKnown RBP14.58□□□□□ -0.08
RTN1-203ENST00000395090 VIRMAQ69YN4 1812 aaKnown RBP14.58□□□□□ -0.08
RTN1-203ENST00000395090 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.57□□□□□ -0.08
RTN1-203ENST00000395090 A6NJR5 290 aa14.57□□□□□ -0.08
RTN1-203ENST00000395090 KCNQ3O43525 872 aa14.57□□□□□ -0.08
RTN1-203ENST00000395090 RAD21O60216 631 aa14.57□□□□□ -0.08
RTN1-203ENST00000395090 HOXB7P09629 217 aa14.57□□□□□ -0.08
RTN1-203ENST00000395090 MTMR14Q8NCE2 650 aa14.57□□□□□ -0.08
RTN1-203ENST00000395090 BCL2L13Q9BXK5 485 aa14.57□□□□□ -0.08
RTN1-203ENST00000395090 TNS2Q63HR2 1409 aa14.57□□□□□ -0.08
RTN1-203ENST00000395090 AFF2P51816 1311 aa14.56□□□□□ -0.08
RTN1-203ENST00000395090 KDM3BQ7LBC6 1761 aa14.56□□□□□ -0.08
RTN1-203ENST00000395090 CFAP99D6REC4 459 aa14.56□□□□□ -0.08
RTN1-203ENST00000395090 DDB1Q16531 1140 aa14.56□□□□□ -0.08
RTN1-203ENST00000395090 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
RTN1-203ENST00000395090 ZNF790Q6PG37 636 aa14.56□□□□□ -0.08
RTN1-203ENST00000395090 TSC1Q92574 1164 aa14.56□□□□□ -0.08
RTN1-203ENST00000395090 SOCS7O14512 581 aa14.55□□□□□ -0.08
RTN1-203ENST00000395090 RETREG3Q86VR2 466 aa14.55□□□□□ -0.08
RTN1-203ENST00000395090 ARHGAP45Q92619 1136 aa14.55□□□□□ -0.08
RTN1-203ENST00000395090 WNK3Q9BYP7 1800 aa14.55□□□□□ -0.08
RTN1-203ENST00000395090 APBB1O00213 710 aa14.55□□□□□ -0.08
RTN1-203ENST00000395090 IPO8O15397 1037 aaKnown RBP14.55□□□□□ -0.08
RTN1-203ENST00000395090 NR1I2O75469 434 aa14.55□□□□□ -0.08
RTN1-203ENST00000395090 FBXO41Q8TF61 875 aa14.55□□□□□ -0.08
RTN1-203ENST00000395090 FRAT1Q92837 279 aaPredicted RBP14.55□□□□□ -0.08
RTN1-203ENST00000395090 GJD4Q96KN9 370 aaPredicted RBP14.55□□□□□ -0.08
RTN1-203ENST00000395090 CHMP4AQ9BY43 222 aa14.55□□□□□ -0.08
RTN1-203ENST00000395090 NOB1Q9ULX3 412 aaKnown RBP14.55□□□□□ -0.08
RTN1-203ENST00000395090 KIF16BQ96L93 1317 aa14.54□□□□□ -0.08
RTN1-203ENST00000395090 GIGYF1O75420 1035 aaPredicted RBP14.54□□□□□ -0.08
RTN1-203ENST00000395090 ATRNO75882 1429 aa14.54□□□□□ -0.08
RTN1-203ENST00000395090 CTDSPL2Q05D32 466 aa14.54□□□□□ -0.08
RTN1-203ENST00000395090 ZKSCAN2Q63HK3 967 aa14.54□□□□□ -0.08
RTN1-203ENST00000395090 PRR7Q8TB68 274 aa14.54□□□□□ -0.08
RTN1-203ENST00000395090 CCDC30Q5VVM6 783 aa14.53□□□□□ -0.08
RTN1-203ENST00000395090 ATF7IPQ6VMQ6 1270 aa14.53□□□□□ -0.08
RTN1-203ENST00000395090 NYAP1Q6ZVC0 841 aa14.53□□□□□ -0.08
RTN1-203ENST00000395090 SCUBE3Q8IX30 993 aa14.53□□□□□ -0.08
RTN1-203ENST00000395090 MARCH10Q8NA82 808 aaPredicted RBP14.53□□□□□ -0.08
RTN1-203ENST00000395090 POM121Q96HA1 1249 aa14.53□□□□□ -0.08
RTN1-203ENST00000395090 TRPC5Q9UL62 973 aaPredicted RBP14.53□□□□□ -0.08
RTN1-203ENST00000395090 SLC39A6Q13433 755 aa14.52□□□□□ -0.08
RTN1-203ENST00000395090 BLOC1S3Q6QNY0 202 aa14.52□□□□□ -0.08
RTN1-203ENST00000395090 TRIM27P14373 513 aa14.52□□□□□ -0.09
RTN1-203ENST00000395090 RNF19BQ6ZMZ0 732 aa14.52□□□□□ -0.09
RTN1-203ENST00000395090 EXOC6Q8TAG9 804 aa14.52□□□□□ -0.09
RTN1-203ENST00000395090 COG6Q9Y2V7 657 aa14.52□□□□□ -0.09
RTN1-203ENST00000395090 TCERG1O14776 1098 aaKnown RBP14.51□□□□□ -0.09
RTN1-203ENST00000395090 CANXP27824 592 aaKnown RBP14.51□□□□□ -0.09
RTN1-203ENST00000395090 ZNF496Q96IT1 587 aaPredicted RBP14.51□□□□□ -0.09
RTN1-203ENST00000395090 CRBNQ96SW2 442 aa14.51□□□□□ -0.09
RTN1-203ENST00000395090 PPP4R2Q9NY27 417 aa14.51□□□□□ -0.09
RTN1-203ENST00000395090 RLBP1P12271 317 aa14.5□□□□□ -0.09
RTN1-203ENST00000395090 BRICD5Q6PL45 260 aa14.5□□□□□ -0.09
RTN1-203ENST00000395090 DZIP1LQ8IYY4 767 aaKnown RBP14.5□□□□□ -0.09
RTN1-203ENST00000395090 TTC5Q8N0Z6 440 aa14.5□□□□□ -0.09
RTN1-203ENST00000395090 PIGBQ92521 554 aa14.5□□□□□ -0.09
RTN1-203ENST00000395090 FMNL2Q96PY5 1086 aa14.5□□□□□ -0.09
RTN1-203ENST00000395090 QTRT2Q9H974 415 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms