RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 COPS6Q7L5N1 327 aa13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 JMYQ8N9B5 988 aa13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 PDLIM2Q96JY6 352 aa13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 FAM227BQ96M60 508 aa13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 IFIT1P09914 478 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 STX1AQ16623 288 aa13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 CPS1P31327 1500 aa13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 DIP2AQ14689 1571 aa13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 NEMFO60524 1076 aa13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 CCDC57Q2TAC2 916 aa13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-209ENST00000394804 CDK11BP21127 795 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 CCT2P78371 535 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 NBPF6Q5VWK0 638 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 NBPF4Q96M43 638 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 MTMR6Q9Y217 621 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 RPS6KB1P23443 525 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 PTH1RQ03431 593 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 Q6ZUG5 572 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 FSIP1Q8NA03 581 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 MNS1Q8NEH6 495 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 CRB1P82279 1406 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 GOLIM4O00461 696 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 PTPN14Q15678 1187 aa13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 IMMTQ16891 758 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 JARID2Q92833 1246 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-209ENST00000394804 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 DTNBO60941 627 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 PTCD1O75127 700 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 SNRPA1P09661 255 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 MCMDC2Q4G0Z9 681 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 CCAR1Q8IX12 1150 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 CBX1P83916 185 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 FAM173BQ6P4H8 233 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 MYRIPQ8NFW9 859 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 LRRC2Q9BYS8 371 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.66□□□□□ -0.229e-7■■□□□ 13.5
UBE2D3-209ENST00000394804 DNAJC25Q9H1X3 360 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 CCP110O43303 1012 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 ME3Q16798 604 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 LUZP1Q86V48 1076 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 IFNL2Q8IZJ0 200 aa13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 ARGLU1Q9NWB6 273 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-209ENST00000394804 KCNQ3O43525 872 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 PTGS1P23219 599 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 EVA1CP58658 441 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 POLA2Q14181 598 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 PI4K2BQ8TCG2 481 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 GCP02774 474 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 C8orf76Q96K31 380 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 PRDM10Q9NQV6 1147 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 PPP4R3BQ5MIZ7 849 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 CADPS2Q86UW7 1296 aa13.65□□□□□ -0.22
UBE2D3-209ENST00000394804 KIF2AO00139 706 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 CDC37L1Q7L3B6 337 aa13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 STRCP1A6NGW2 1772 aa13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 KRT28Q7Z3Y7 464 aa13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 DDX17Q92841 729 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 ORAI2Q96SN7 254 aa13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 ERICH2A1L162 156 aa13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 SMTNL1A8MU46 457 aa13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 TOM1O60784 492 aa13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 C17orf53Q8N3J3 647 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 CHD2O14647 1828 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 SERPINC1P01008 464 aa13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 SLAIN2Q9P270 581 aa13.64□□□□□ -0.23
UBE2D3-209ENST00000394804 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 KIF6Q6ZMV9 814 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 CCAR2Q8N163 923 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 KDRP35968 1356 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 USP31Q70CQ4 1352 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 CDKL5O76039 1030 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 ZSCAN25Q6NSZ9 544 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 TMEM87AQ8NBN3 555 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 OVOS2A0A0J9YW53 1432 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 OVOS2Q6IE36 1432 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 TPM1P09493 284 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 SFPQP23246 707 aaKnown RBP eCLIP13.63□□□□□ -0.233e-6■□□□□ 10.5
UBE2D3-209ENST00000394804 ADCK5Q3MIX3 580 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 KIF18AQ8NI77 898 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
UBE2D3-209ENST00000394804 NPHP1O15259 732 aa13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 GIGYF1O75420 1035 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 GSDMDP57764 484 aa13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 KLHDC4Q8TBB5 520 aa13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 EAF2Q96CJ1 260 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 CCDC94Q9BW85 323 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 PAXBP1Q9Y5B6 917 aa13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 TFCP2Q12800 502 aa13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 LMBR1LQ6UX01 489 aa13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 LEO1Q8WVC0 666 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 CLSTN2Q9H4D0 955 aa13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 CNNM1Q9NRU3 951 aa13.62□□□□□ -0.23
UBE2D3-209ENST00000394804 TPCN1Q9ULQ1 816 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms