RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 COL9A3Q14050 684 aaPredicted RBP21.88■■□□□ 1.09
PCDHA1-202ENST00000394633 MAP4K1Q92918 833 aa21.88■■□□□ 1.09
PCDHA1-202ENST00000394633 ZKSCAN1P17029 563 aaPredicted RBP21.87■■□□□ 1.09
PCDHA1-202ENST00000394633 EAF2Q96CJ1 260 aaPredicted RBP21.87■■□□□ 1.09
PCDHA1-202ENST00000394633 AP5Z1O43299 807 aa21.86■■□□□ 1.09
PCDHA1-202ENST00000394633 IL2RBP14784 551 aa21.86■■□□□ 1.09
PCDHA1-202ENST00000394633 NOLC1Q14978 699 aaKnown RBP eCLIP21.86■■□□□ 1.09
PCDHA1-202ENST00000394633 IFNL2Q8IZJ0 200 aa21.86■■□□□ 1.09
PCDHA1-202ENST00000394633 HDAC5Q9UQL6 1122 aa21.86■■□□□ 1.09
PCDHA1-202ENST00000394633 GRM8O00222 908 aa21.86■■□□□ 1.09
PCDHA1-202ENST00000394633 SLC27A2O14975 620 aa21.86■■□□□ 1.09
PCDHA1-202ENST00000394633 CCDC8Q9H0W5 538 aaPredicted RBP21.86■■□□□ 1.09
PCDHA1-202ENST00000394633 SNRKQ9NRH2 765 aa21.86■■□□□ 1.09
PCDHA1-202ENST00000394633 UTYO14607 1347 aa21.85■■□□□ 1.09
PCDHA1-202ENST00000394633 HIP1O00291 1037 aa21.85■■□□□ 1.09
PCDHA1-202ENST00000394633 KCNJ4P48050 445 aa21.85■■□□□ 1.09
PCDHA1-202ENST00000394633 ZMYND15Q9H091 742 aa21.85■■□□□ 1.09
PCDHA1-202ENST00000394633 BICC1Q9H694 974 aaKnown RBP21.85■■□□□ 1.09
PCDHA1-202ENST00000394633 TLR7Q9NYK1 1049 aaKnown RBP21.85■■□□□ 1.09
PCDHA1-202ENST00000394633 NRAPQ86VF7 1730 aa21.85■■□□□ 1.09
PCDHA1-202ENST00000394633 PLEKHG2Q9H7P9 1386 aa21.84■■□□□ 1.09
PCDHA1-202ENST00000394633 DNTTIP2Q5QJE6 756 aaKnown RBP21.84■■□□□ 1.09
PCDHA1-202ENST00000394633 C17orf53Q8N3J3 647 aaPredicted RBP21.84■■□□□ 1.09
PCDHA1-202ENST00000394633 LINS1Q8NG48 757 aa21.84■■□□□ 1.09
PCDHA1-202ENST00000394633 A0A0D9SFI3 127 aa21.84■■□□□ 1.09
PCDHA1-202ENST00000394633 G3BP1Q13283 466 aaKnown RBP eCLIP21.84■■□□□ 1.09
PCDHA1-202ENST00000394633 LARP1BQ659C4 914 aaKnown RBP21.84■■□□□ 1.09
PCDHA1-202ENST00000394633 TTC6Q86TZ1 520 aa21.84■■□□□ 1.09
PCDHA1-202ENST00000394633 MYRIPQ8NFW9 859 aa21.84■■□□□ 1.09
PCDHA1-202ENST00000394633 CDC37L1Q7L3B6 337 aa21.83■■□□□ 1.09
PCDHA1-202ENST00000394633 ZCRB1Q8TBF4 217 aaKnown RBP21.83■■□□□ 1.09
PCDHA1-202ENST00000394633 PSMA5P28066 241 aa21.82■■□□□ 1.08
PCDHA1-202ENST00000394633 PLCB2Q00722 1185 aa21.82■■□□□ 1.08
PCDHA1-202ENST00000394633 SPTLC3Q9NUV7 552 aa21.82■■□□□ 1.08
PCDHA1-202ENST00000394633 TAF6LQ9Y6J9 622 aa21.82■■□□□ 1.08
PCDHA1-202ENST00000394633 BOLA2Q9H3K6 86 aa21.82■■□□□ 1.08
PCDHA1-202ENST00000394633 MED23Q9ULK4 1368 aa21.81■■□□□ 1.08
PCDHA1-202ENST00000394633 KRT85P78386 507 aa21.81■■□□□ 1.08
PCDHA1-202ENST00000394633 FERMT3Q86UX7 667 aa21.81■■□□□ 1.08
PCDHA1-202ENST00000394633 NFATC2IPQ8NCF5 419 aa21.81■■□□□ 1.08
PCDHA1-202ENST00000394633 TCEANC2Q96MN5 208 aa21.81■■□□□ 1.08
PCDHA1-202ENST00000394633 C5P01031 1676 aa21.81■■□□□ 1.08
PCDHA1-202ENST00000394633 PCDH11XQ9BZA7 1347 aa21.81■■□□□ 1.08
PCDHA1-202ENST00000394633 PCDH11YQ9BZA8 1340 aa21.81■■□□□ 1.08
PCDHA1-202ENST00000394633 FAM173BQ6P4H8 233 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 BLOC1S2Q6QNY1 142 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 FSD1Q9BTV5 496 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 SIL1Q9H173 461 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 SLC52A2Q9HAB3 445 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 JCADQ9P266 1359 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 CCDC192P0DO97 292 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 AIMP1Q12904 312 aaKnown RBP21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 DCAF5Q96JK2 942 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 PRIMPOLQ96LW4 560 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 DDX21Q9NR30 783 aaKnown RBP eCLIP21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 ELP1O95163 1332 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 DISP2A7MBM2 1401 aa21.8■■□□□ 1.08
PCDHA1-202ENST00000394633 MRC1P22897 1456 aa21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 LIG1P18858 919 aa21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 RPS6KB1P23443 525 aa21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 SLC39A6Q13433 755 aa21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 MTERF4Q7Z6M4 381 aaKnown RBP21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 DDX58O95786 925 aaKnown RBP21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 IGKV5-2P06315 115 aa21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 PDIA4P13667 645 aaKnown RBP21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 TOB2Q14106 344 aaPredicted RBP21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 PDIA6Q15084 440 aa21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 ALDH8A1Q9H2A2 487 aaPredicted RBP21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 KCNF1Q9H3M0 494 aa21.79■■□□□ 1.08
PCDHA1-202ENST00000394633 RNF20Q5VTR2 975 aa21.78■■□□□ 1.08
PCDHA1-202ENST00000394633 KLHDC4Q8TBB5 520 aa21.78■■□□□ 1.08
PCDHA1-202ENST00000394633 SLIT2O94813 1529 aa21.78■■□□□ 1.08
PCDHA1-202ENST00000394633 PDCP20941 246 aa21.78■■□□□ 1.08
PCDHA1-202ENST00000394633 ANKRD1Q15327 319 aa21.78■■□□□ 1.08
PCDHA1-202ENST00000394633 ZNF589Q86UQ0 364 aaPredicted RBP21.78■■□□□ 1.08
PCDHA1-202ENST00000394633 JARID2Q92833 1246 aaPredicted RBP21.78■■□□□ 1.08
PCDHA1-202ENST00000394633 CHMP3Q9Y3E7 222 aa21.78■■□□□ 1.08
PCDHA1-202ENST00000394633 LRP6O75581 1613 aa21.77■■□□□ 1.08
PCDHA1-202ENST00000394633 WNK3Q9BYP7 1800 aa21.77■■□□□ 1.08
PCDHA1-202ENST00000394633 NUP62CLQ9H1M0 184 aa21.77■■□□□ 1.08
PCDHA1-202ENST00000394633 HSPA1LP34931 641 aa21.76■■□□□ 1.07
PCDHA1-202ENST00000394633 MAP3K11Q16584 847 aa21.76■■□□□ 1.07
PCDHA1-202ENST00000394633 HMGN5P82970 282 aaKnown RBP21.76■■□□□ 1.07
PCDHA1-202ENST00000394633 MRVI1Q9Y6F6 885 aa21.76■■□□□ 1.07
PCDHA1-202ENST00000394633 NWD2Q9ULI1 1742 aa21.76■■□□□ 1.07
PCDHA1-202ENST00000394633 TOGARAM1Q9Y4F4 1720 aa21.76■■□□□ 1.07
PCDHA1-202ENST00000394633 KIAA1524Q8TCG1 905 aa21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 FAM200AQ8TCP9 573 aa21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 PYCARDQ9ULZ3 195 aa21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 GTF2F1P35269 517 aaKnown RBP eCLIP21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 TYRO3Q06418 890 aa21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 CAMK4Q16566 473 aa21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 TSGA10IPQ3SY00 556 aa21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 RIC3Q7Z5B4 369 aa21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 SPC24Q8NBT2 197 aa21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 EDC3Q96F86 508 aaKnown RBP21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 C8orf37Q96NL8 207 aa21.75■■□□□ 1.07
PCDHA1-202ENST00000394633 EPHA10Q5JZY3 1008 aa21.74■■□□□ 1.07
PCDHA1-202ENST00000394633 ZNF790Q6PG37 636 aa21.74■■□□□ 1.07
PCDHA1-202ENST00000394633 HMG20BQ9P0W2 317 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms