RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ZSCAN20P17040 1043 aaPredicted RBP10.37□□□□□ -0.75
RTN4-206ENST00000394611 MCM6Q14566 821 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 TAF7Q15545 349 aaPredicted RBP10.37□□□□□ -0.75
RTN4-206ENST00000394611 FKBP15Q5T1M5 1219 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 NUTM2AQ8IVF1 878 aaPredicted RBP10.37□□□□□ -0.75
RTN4-206ENST00000394611 ZNF710Q8N1W2 664 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 KIF18AQ8NI77 898 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 TIGD1Q96MW7 591 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 APPP05067 770 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 MYL6BP14649 208 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 LMOD1P29536 600 aaPredicted RBP10.36□□□□□ -0.75
RTN4-206ENST00000394611 G3BP1Q13283 466 aaKnown RBP eCLIP10.36□□□□□ -0.753e-16■□□□□ 9.4
RTN4-206ENST00000394611 CFAP100Q494V2 611 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 HS1BP3Q53T59 392 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 AOPEPQ8N6M6 819 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 GNAI3P08754 354 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 CHMLP26374 656 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 GYS2P54840 703 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 ERCC6LQ2NKX8 1250 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 CDC37L1Q7L3B6 337 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 CCDC102AQ96A19 550 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 HINFPQ9BQA5 517 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 PNPLA6Q8IY17 1366 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 GOLGA8FQ08AF8 430 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 GOLGA8DPQ0D2H9 430 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 STK38Q15208 465 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 ARHGAP29Q52LW3 1261 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 ARGLU1Q9NWB6 273 aaPredicted RBP10.36□□□□□ -0.75
RTN4-206ENST00000394611 POLKQ9UBT6 870 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 LARGE1O95461 756 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 BRD1O95696 1058 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
RTN4-206ENST00000394611 CCDC69A6NI79 296 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 TMCO3Q6UWJ1 677 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 GOLGA6L1Q8N7Z2 621 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 EDC3Q96F86 508 aaKnown RBP10.35□□□□□ -0.75
RTN4-206ENST00000394611 GTPBP4Q9BZE4 634 aaKnown RBP10.35□□□□□ -0.75
RTN4-206ENST00000394611 FTOQ9C0B1 505 aaKnown RBP eCLIP10.35□□□□□ -0.752e-14■□□□□ 10
RTN4-206ENST00000394611 MAP2P11137 1827 aaKnown RBP10.35□□□□□ -0.75
RTN4-206ENST00000394611 FLIIQ13045 1269 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 RASEFQ8IZ41 740 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 KLHDC4Q8TBB5 520 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 EPC1Q9H2F5 836 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 SNW1Q13573 536 aaKnown RBP10.35□□□□□ -0.75
RTN4-206ENST00000394611 OTUD7BQ6GQQ9 843 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 FBXO41Q8TF61 875 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 CBX8Q9HC52 389 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 MTMR7Q9Y216 660 aa10.35□□□□□ -0.75
RTN4-206ENST00000394611 SFPQP23246 707 aaKnown RBP eCLIP10.34□□□□□ -0.752e-6■■■□□ 15.5
RTN4-206ENST00000394611 CHRNA2Q15822 529 aa10.34□□□□□ -0.75
RTN4-206ENST00000394611 KLHL10Q6JEL2 608 aa10.34□□□□□ -0.75
RTN4-206ENST00000394611 MAP3K19Q56UN5 1328 aa10.34□□□□□ -0.75
RTN4-206ENST00000394611 ADAMTS2O95450 1211 aa10.34□□□□□ -0.75
RTN4-206ENST00000394611 HAND2P61296 217 aa10.34□□□□□ -0.75
RTN4-206ENST00000394611 GPS2Q13227 327 aa10.34□□□□□ -0.75
RTN4-206ENST00000394611 WASHC4Q2M389 1173 aa10.34□□□□□ -0.75
RTN4-206ENST00000394611 CCDC144CPQ8IYA2 1237 aa10.34□□□□□ -0.75
RTN4-206ENST00000394611 JAK2O60674 1132 aa10.34□□□□□ -0.75
RTN4-206ENST00000394611 PHAXQ9H814 394 aaKnown RBP10.34□□□□□ -0.75
RTN4-206ENST00000394611 PHRF1Q9P1Y6 1649 aaKnown RBP10.33□□□□□ -0.76
RTN4-206ENST00000394611 LARP1Q6PKG0 1096 aaKnown RBP10.33□□□□□ -0.76
RTN4-206ENST00000394611 FSIP1Q8NA03 581 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 ADCK5Q3MIX3 580 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 HSP90AB3PQ58FF7 597 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 RNF20Q5VTR2 975 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 KCNH5Q8NCM2 988 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 RASSF8Q8NHQ8 419 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 CRYBG1Q9Y4K1 1723 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 SYNE3Q6ZMZ3 975 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 GDAP1L1Q96MZ0 367 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 SLIT3O75094 1523 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 USP54Q70EL1 1684 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 NFAT5O94916 1531 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 BRF1Q92994 677 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 PLEKHA4Q9H4M7 779 aa10.33□□□□□ -0.76
RTN4-206ENST00000394611 JCADQ9P266 1359 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 USP27XA6NNY8 438 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 SEC31AO94979 1220 aaKnown RBP10.32□□□□□ -0.76
RTN4-206ENST00000394611 DNA2P51530 1060 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 KARSQ15046 597 aaKnown RBP10.32□□□□□ -0.76
RTN4-206ENST00000394611 AXDND1Q5T1B0 1012 aaPredicted RBP10.32□□□□□ -0.76
RTN4-206ENST00000394611 CCDC30Q5VVM6 783 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 CCAR1Q8IX12 1150 aaKnown RBP10.32□□□□□ -0.76
RTN4-206ENST00000394611 KIAA0232Q92628 1395 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 NR1I2O75469 434 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 TPM3P06753 285 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 CCT4P50991 539 aaKnown RBP10.32□□□□□ -0.76
RTN4-206ENST00000394611 CEP57L1Q8IYX8 460 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 FAM227BQ96M60 508 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 OGFRQ9NZT2 677 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 TTC6Q86TZ1 520 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 ARHGEF25Q86VW2 580 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 CACTINQ8WUQ7 758 aaKnown RBP10.32□□□□□ -0.76
RTN4-206ENST00000394611 PDLIM2Q96JY6 352 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 ZCCHC17Q9NP64 241 aaKnown RBP10.32□□□□□ -0.76
RTN4-206ENST00000394611 ABCA3Q99758 1704 aa10.32□□□□□ -0.76
RTN4-206ENST00000394611 LTN1O94822 1766 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 A0A1B0GVL5 298 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 PI4KAP2A4QPH2 592 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms