RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 CCDC152Q4G0S7 254 aa23.97■■□□□ 1.43
TRPT1-202ENST00000394546 CDHR2Q9BYE9 1310 aa23.97■■□□□ 1.43
TRPT1-202ENST00000394546 CACNA1FO60840 1977 aa23.96■■□□□ 1.43
TRPT1-202ENST00000394546 CCDC88AQ3V6T2 1871 aa23.96■■□□□ 1.43
TRPT1-202ENST00000394546 NEURL1BA8MQ27 555 aa23.96■■□□□ 1.43
TRPT1-202ENST00000394546 SLFN5Q08AF3 891 aa23.96■■□□□ 1.43
TRPT1-202ENST00000394546 DPP8Q6V1X1 898 aaPredicted RBP23.95■■□□□ 1.42
TRPT1-202ENST00000394546 MPNDQ8N594 471 aa23.95■■□□□ 1.42
TRPT1-202ENST00000394546 LINS1Q8NG48 757 aa23.95■■□□□ 1.42
TRPT1-202ENST00000394546 CWF19L2Q2TBE0 894 aaKnown RBP23.94■■□□□ 1.42
TRPT1-202ENST00000394546 DICER1Q9UPY3 1922 aaKnown RBP23.94■■□□□ 1.42
TRPT1-202ENST00000394546 TIAM2Q8IVF5 1701 aa23.93■■□□□ 1.42
TRPT1-202ENST00000394546 RPS8P62241 208 aaKnown RBP23.93■■□□□ 1.42
TRPT1-202ENST00000394546 MIER1Q8N108 512 aa23.93■■□□□ 1.42
TRPT1-202ENST00000394546 LARGE2Q8N3Y3 721 aa23.93■■□□□ 1.42
TRPT1-202ENST00000394546 RBM46Q8TBY0 533 aaKnown RBP23.93■■□□□ 1.42
TRPT1-202ENST00000394546 SNED1Q8TER0 1413 aa23.93■■□□□ 1.42
TRPT1-202ENST00000394546 GCKRQ14397 625 aa23.92■■□□□ 1.42
TRPT1-202ENST00000394546 JARID2Q92833 1246 aaPredicted RBP23.92■■□□□ 1.42
TRPT1-202ENST00000394546 RTFDC1Q9BY42 306 aaPredicted RBP23.92■■□□□ 1.42
TRPT1-202ENST00000394546 LAMB2P55268 1798 aa23.92■■□□□ 1.42
TRPT1-202ENST00000394546 DDX60Q8IY21 1712 aaKnown RBP23.92■■□□□ 1.42
TRPT1-202ENST00000394546 H7C1W4 665 aa23.91■■□□□ 1.42
TRPT1-202ENST00000394546 FZD9O00144 591 aa23.91■■□□□ 1.42
TRPT1-202ENST00000394546 EIF6P56537 245 aaKnown RBP23.91■■□□□ 1.42
TRPT1-202ENST00000394546 CELF1Q92879 486 aaKnown RBP23.91■■□□□ 1.42
TRPT1-202ENST00000394546 IQCA1LA6NCM1 817 aa23.9■■□□□ 1.42
TRPT1-202ENST00000394546 PPIP5K2O43314 1243 aa23.9■■□□□ 1.42
TRPT1-202ENST00000394546 CTSWP56202 376 aa23.9■■□□□ 1.42
TRPT1-202ENST00000394546 NIM1KQ8IY84 436 aa23.9■■□□□ 1.42
TRPT1-202ENST00000394546 DDNO94850 711 aaPredicted RBP23.89■■□□□ 1.41
TRPT1-202ENST00000394546 CT47B1P0C2W7 299 aaPredicted RBP23.89■■□□□ 1.41
TRPT1-202ENST00000394546 FSTL1Q12841 308 aa23.89■■□□□ 1.41
TRPT1-202ENST00000394546 UBE3BQ7Z3V4 1068 aa23.89■■□□□ 1.41
TRPT1-202ENST00000394546 CDC5LQ99459 802 aaKnown RBP23.89■■□□□ 1.41
TRPT1-202ENST00000394546 ANKRD18AQ8IVF6 992 aa23.88■■□□□ 1.41
TRPT1-202ENST00000394546 F6X3S4 739 aa23.87■■□□□ 1.41
TRPT1-202ENST00000394546 TRMT2AQ8IZ69 625 aaKnown RBP23.87■■□□□ 1.41
TRPT1-202ENST00000394546 GPC2Q8N158 579 aa23.87■■□□□ 1.41
TRPT1-202ENST00000394546 SMC1BQ8NDV3 1235 aa23.87■■□□□ 1.41
TRPT1-202ENST00000394546 CDCA7LQ96GN5 454 aa23.87■■□□□ 1.41
TRPT1-202ENST00000394546 NSFL1CQ9UNZ2 370 aaKnown RBP23.87■■□□□ 1.41
TRPT1-202ENST00000394546 AOC3Q16853 763 aa23.86■■□□□ 1.41
TRPT1-202ENST00000394546 ALDH1L2Q3SY69 923 aa23.86■■□□□ 1.41
TRPT1-202ENST00000394546 BEND3Q5T5X7 828 aa23.86■■□□□ 1.41
TRPT1-202ENST00000394546 TTLL11Q8NHH1 800 aa23.86■■□□□ 1.41
TRPT1-202ENST00000394546 L3MBTL3Q96JM7 780 aaPredicted RBP23.86■■□□□ 1.41
TRPT1-202ENST00000394546 PLA2G12BQ9BX93 195 aa23.86■■□□□ 1.41
TRPT1-202ENST00000394546 SEC31BQ9NQW1 1179 aa23.86■■□□□ 1.41
TRPT1-202ENST00000394546 WDR90Q96KV7 1748 aa23.85■■□□□ 1.41
TRPT1-202ENST00000394546 HSPA6P17066 643 aa23.85■■□□□ 1.41
TRPT1-202ENST00000394546 KIAA2012Q0VF49 1180 aa23.85■■□□□ 1.41
TRPT1-202ENST00000394546 SLC4A10Q6U841 1118 aa23.85■■□□□ 1.41
TRPT1-202ENST00000394546 MRPL50Q8N5N7 158 aaKnown RBP23.85■■□□□ 1.41
TRPT1-202ENST00000394546 CCDC85AQ96PX6 553 aaPredicted RBP23.85■■□□□ 1.41
TRPT1-202ENST00000394546 EYA3Q99504 573 aa23.85■■□□□ 1.41
TRPT1-202ENST00000394546 PTPRCP08575 1304 aa23.84■■□□□ 1.41
TRPT1-202ENST00000394546 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
TRPT1-202ENST00000394546 C6orf229H3BNL8 230 aa23.84■■□□□ 1.41
TRPT1-202ENST00000394546 ALDH1L1O75891 902 aa23.84■■□□□ 1.41
TRPT1-202ENST00000394546 ZNRF3Q9ULT6 936 aa23.84■■□□□ 1.41
TRPT1-202ENST00000394546 RTL9Q8NET4 1388 aa23.83■■□□□ 1.41
TRPT1-202ENST00000394546 POTECB2RU33 542 aa23.83■■□□□ 1.41
TRPT1-202ENST00000394546 WASHC4Q2M389 1173 aa23.83■■□□□ 1.41
TRPT1-202ENST00000394546 SLC51AQ86UW1 340 aa23.83■■□□□ 1.41
TRPT1-202ENST00000394546 SRCIN1Q9C0H9 1055 aa23.83■■□□□ 1.41
TRPT1-202ENST00000394546 ANKIB1Q9P2G1 1089 aa23.83■■□□□ 1.41
TRPT1-202ENST00000394546 GPSM2P81274 684 aa23.82■■□□□ 1.4
TRPT1-202ENST00000394546 SSH1Q8WYL5 1049 aa23.82■■□□□ 1.4
TRPT1-202ENST00000394546 C9orf78Q9NZ63 289 aaPredicted RBP23.82■■□□□ 1.4
TRPT1-202ENST00000394546 HACL1Q9UJ83 578 aa23.82■■□□□ 1.4
TRPT1-202ENST00000394546 GJA3Q9Y6H8 435 aa23.82■■□□□ 1.4
TRPT1-202ENST00000394546 CASP7P55210 303 aa23.81■■□□□ 1.4
TRPT1-202ENST00000394546 GREM2Q9H772 168 aa23.81■■□□□ 1.4
TRPT1-202ENST00000394546 PODXL2Q9NZ53 605 aa23.81■■□□□ 1.4
TRPT1-202ENST00000394546 GRM8O00222 908 aa23.8■■□□□ 1.4
TRPT1-202ENST00000394546 LMOD1P29536 600 aaPredicted RBP23.8■■□□□ 1.4
TRPT1-202ENST00000394546 IGHMBP2P38935 993 aaKnown RBP23.8■■□□□ 1.4
TRPT1-202ENST00000394546 SMC4Q9NTJ3 1288 aa23.8■■□□□ 1.4
TRPT1-202ENST00000394546 BSDC1Q9NW68 430 aaPredicted RBP23.8■■□□□ 1.4
TRPT1-202ENST00000394546 GGA1Q9UJY5 639 aa23.8■■□□□ 1.4
TRPT1-202ENST00000394546 CSF1RP07333 972 aa23.79■■□□□ 1.4
TRPT1-202ENST00000394546 APLP1P51693 650 aa23.79■■□□□ 1.4
TRPT1-202ENST00000394546 TNIP1Q15025 636 aa23.79■■□□□ 1.4
TRPT1-202ENST00000394546 ZC3H12CQ9C0D7 883 aaKnown RBP23.79■■□□□ 1.4
TRPT1-202ENST00000394546 TAF1DQ9H5J8 278 aaPredicted RBP23.79■■□□□ 1.4
TRPT1-202ENST00000394546 TAF1P21675 1872 aa23.79■■□□□ 1.4
TRPT1-202ENST00000394546 PNMA8AQ86V59 439 aaPredicted RBP23.78■■□□□ 1.4
TRPT1-202ENST00000394546 TBC1D16Q8TBP0 767 aa23.78■■□□□ 1.4
TRPT1-202ENST00000394546 MPHOSPH8Q99549 860 aa23.78■■□□□ 1.4
TRPT1-202ENST00000394546 POLLQ9UGP5 575 aa23.78■■□□□ 1.4
TRPT1-202ENST00000394546 LRRC37AA6NMS7 1700 aa23.78■■□□□ 1.4
TRPT1-202ENST00000394546 XDHP47989 1333 aa23.78■■□□□ 1.4
TRPT1-202ENST00000394546 ANKRD18BA2A2Z9 1011 aa23.77■■□□□ 1.4
TRPT1-202ENST00000394546 G3V3G9 751 aa23.77■■□□□ 1.4
TRPT1-202ENST00000394546 UFL1O94874 794 aa23.77■■□□□ 1.4
TRPT1-202ENST00000394546 ITGA6P23229 1130 aa23.77■■□□□ 1.4
TRPT1-202ENST00000394546 HNRNPUQ00839 825 aaKnown RBP eCLIP23.77■■□□□ 1.4
TRPT1-202ENST00000394546 DCAF8Q5TAQ9 597 aa23.77■■□□□ 1.4
TRPT1-202ENST00000394546 RIMBP2O15034 1052 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms