RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	ATP5J2-PTCD1	G3V325	749 aa		11.17	□□□□□ -0.62
MITF-205	ENST00000394348	PCCA	P05165	728 aa	Predicted RBP	11.17	□□□□□ -0.62
MITF-205	ENST00000394348	ATP5J	P18859	108 aa		11.17	□□□□□ -0.62
MITF-205	ENST00000394348	MCM4	P33991	863 aa		11.17	□□□□□ -0.62
MITF-205	ENST00000394348	IL15	P40933	162 aa	Predicted RBP	11.17	□□□□□ -0.62
MITF-205	ENST00000394348	PIP4K2A	P48426	406 aa	Predicted RBP	11.17	□□□□□ -0.62
MITF-205	ENST00000394348	TNNI3K	Q59H18	835 aa		11.17	□□□□□ -0.62
MITF-205	ENST00000394348	KIAA1211	Q6ZU35	1233 aa		11.17	□□□□□ -0.62
MITF-205	ENST00000394348	DNAJC10	Q8IXB1	793 aa		11.17	□□□□□ -0.62
MITF-205	ENST00000394348	KCNB2	Q92953	911 aa		11.17	□□□□□ -0.62
MITF-205	ENST00000394348	GBP4	Q96PP9	640 aa		11.17	□□□□□ -0.62
MITF-205	ENST00000394348	LSG1	Q9H089	658 aa	Known RBP	11.17	□□□□□ -0.62
MITF-205	ENST00000394348	FPGT-TNNI3K	V9GXZ4	949 aa		11.17	□□□□□ -0.62
MITF-205	ENST00000394348	JCAD	Q9P266	1359 aa		11.16	□□□□□ -0.62
MITF-205	ENST00000394348	ERVV-1	B6SEH8	477 aa		11.16	□□□□□ -0.62
MITF-205	ENST00000394348	CYP19A1	P11511	503 aa	Predicted RBP	11.16	□□□□□ -0.62
MITF-205	ENST00000394348	IL6ST	P40189	918 aa	Predicted RBP	11.16	□□□□□ -0.62
MITF-205	ENST00000394348	NUCB2	P80303	420 aa		11.16	□□□□□ -0.62
MITF-205	ENST00000394348	LMBR1L	Q6UX01	489 aa		11.16	□□□□□ -0.62
MITF-205	ENST00000394348	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.16	□□□□□ -0.62
MITF-205	ENST00000394348	CUL4A	Q13619	759 aa		11.15	□□□□□ -0.62
MITF-205	ENST00000394348	DDB1	Q16531	1140 aa		11.15	□□□□□ -0.62
MITF-205	ENST00000394348	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.15	□□□□□ -0.62
MITF-205	ENST00000394348	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
MITF-205	ENST00000394348	INTS4	Q96HW7	963 aa	Known RBP	11.15	□□□□□ -0.62
MITF-205	ENST00000394348	SIL1	Q9H173	461 aa		11.15	□□□□□ -0.62
MITF-205	ENST00000394348	ZBTB3	Q9H5J0	574 aa		11.15	□□□□□ -0.62
MITF-205	ENST00000394348	ZNF609	O15014	1411 aa		11.15	□□□□□ -0.62
MITF-205	ENST00000394348	MED23	Q9ULK4	1368 aa		11.15	□□□□□ -0.63
MITF-205	ENST00000394348	EYA2	O00167	538 aa		11.14	□□□□□ -0.63
MITF-205	ENST00000394348	AK7	Q96M32	723 aa		11.14	□□□□□ -0.63
MITF-205	ENST00000394348	TM6SF1	Q9BZW5	370 aa		11.14	□□□□□ -0.63
MITF-205	ENST00000394348	DBNL	Q9UJU6	430 aa	Known RBP	11.14	□□□□□ -0.63
MITF-205	ENST00000394348	PCDHB13	Q9Y5F0	798 aa		11.14	□□□□□ -0.63
MITF-205	ENST00000394348	ABCC12	Q96J65	1359 aa		11.14	□□□□□ -0.63
MITF-205	ENST00000394348	MYH3	P11055	1940 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	LRP5	O75197	1615 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	RGL2	O15211	777 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	MAP4K4	O95819	1239 aa	Predicted RBP	11.13	□□□□□ -0.63
MITF-205	ENST00000394348	CYP2E1	P05181	493 aa	Predicted RBP	11.13	□□□□□ -0.63
MITF-205	ENST00000394348	CSF1R	P07333	972 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	NEK4	P51957	841 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	TFCP2	Q12800	502 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	ATG9A	Q7Z3C6	839 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	SPRYD3	Q8NCJ5	442 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	KLHDC4	Q8TBB5	520 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	SMARCC1	Q92922	1105 aa	Predicted RBP	11.13	□□□□□ -0.63
MITF-205	ENST00000394348	TNPO1	Q92973	898 aa	Known RBP	11.13	□□□□□ -0.63
MITF-205	ENST00000394348	DCBLD2	Q96PD2	775 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	HAUS7	Q99871	368 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.13	□□□□□ -0.63
MITF-205	ENST00000394348	PALD1	Q9ULE6	856 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	NUP98	P52948	1817 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	PALLD	Q8WX93	1383 aa		11.13	□□□□□ -0.63
MITF-205	ENST00000394348	CCDC171	Q6TFL3	1326 aa		11.12	□□□□□ -0.63
MITF-205	ENST00000394348	CWC27	Q6UX04	472 aa	Known RBP	11.12	□□□□□ -0.63
MITF-205	ENST00000394348	SLC4A9	Q96Q91	983 aa		11.12	□□□□□ -0.63
MITF-205	ENST00000394348	FSD1	Q9BTV5	496 aa		11.12	□□□□□ -0.63
MITF-205	ENST00000394348	IL25	Q9H293	177 aa		11.12	□□□□□ -0.63
MITF-205	ENST00000394348	TLR7	Q9NYK1	1049 aa	Known RBP	11.12	□□□□□ -0.63
MITF-205	ENST00000394348	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.12	□□□□□ -0.63
MITF-205	ENST00000394348	COL5A3	P25940	1745 aa	Predicted RBP	11.12	□□□□□ -0.63
MITF-205	ENST00000394348	LAMB2	P55268	1798 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	ADAMTS2	O95450	1211 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	PRIM1	P49642	420 aa	Known RBP	11.11	□□□□□ -0.63
MITF-205	ENST00000394348	VPS72	Q15906	364 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	CCDC57	Q2TAC2	916 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.11	□□□□□ -0.63
MITF-205	ENST00000394348	NLRP10	Q86W26	655 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	MAP4K1	Q92918	833 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	TMX3	Q96JJ7	454 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	BOLA2	Q9H3K6	86 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	HMG20B	Q9P0W2	317 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	AKAP2	Q9Y2D5	859 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	SNX14	Q9Y5W7	946 aa		11.11	□□□□□ -0.63
MITF-205	ENST00000394348	SH3TC1	Q8TE82	1336 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	GOLGA6L22	H0YM25	854 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	POTEI	P0CG38	1075 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	HSP90B1	P14625	803 aa	Known RBP	11.1	□□□□□ -0.63
MITF-205	ENST00000394348	EIF5	P55010	431 aa	Known RBP	11.1	□□□□□ -0.63
MITF-205	ENST00000394348	NMI	Q13287	307 aa	Predicted RBP	11.1	□□□□□ -0.63
MITF-205	ENST00000394348	NECTIN1	Q15223	517 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	TSGA10IP	Q3SY00	556 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	RNF20	Q5VTR2	975 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	MARCH10	Q8NA82	808 aa	Predicted RBP	11.1	□□□□□ -0.63
MITF-205	ENST00000394348	JARID2	Q92833	1246 aa	Predicted RBP	11.1	□□□□□ -0.63
MITF-205	ENST00000394348	TTC14	Q96N46	770 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	SGIP1	Q9BQI5	828 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	CCDC87	Q9NVE4	849 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	ZBTB1	Q9Y2K1	713 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	CHMP3	Q9Y3E7	222 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	BCOR	Q6W2J9	1755 aa		11.1	□□□□□ -0.63
MITF-205	ENST00000394348	SPATA31A6	Q5VVP1	1343 aa		11.09	□□□□□ -0.63
MITF-205	ENST00000394348	THSD7A	Q9UPZ6	1657 aa		11.09	□□□□□ -0.63
MITF-205	ENST00000394348	RTL9	Q8NET4	1388 aa		11.09	□□□□□ -0.63
MITF-205	ENST00000394348	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.09	□□□□□ -0.63
MITF-205	ENST00000394348	ZKSCAN1	P17029	563 aa	Predicted RBP	11.09	□□□□□ -0.63
MITF-205	ENST00000394348	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.09	□□□□□ -0.63
MITF-205	ENST00000394348	PARP10	Q53GL7	1025 aa		11.09	□□□□□ -0.63
MITF-205	ENST00000394348	VPS53	Q5VIR6	699 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms