RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 TMX4Q9H1E5 349 aaPredicted RBP14.47□□□□□ -0.09
VTI1BP2-201ENST00000394154 NUDCQ9Y266 331 aa14.47□□□□□ -0.09
VTI1BP2-201ENST00000394154 H7C1D1 291 aa14.46□□□□□ -0.09
VTI1BP2-201ENST00000394154 DLL1O00548 723 aa14.46□□□□□ -0.09
VTI1BP2-201ENST00000394154 KRT26Q7Z3Y9 468 aa14.46□□□□□ -0.09
VTI1BP2-201ENST00000394154 ZNF296Q8WUU4 475 aaPredicted RBP14.46□□□□□ -0.09
VTI1BP2-201ENST00000394154 RBM17Q96I25 401 aaKnown RBP14.46□□□□□ -0.09
VTI1BP2-201ENST00000394154 CRAMP1Q96RY5 1269 aa14.46□□□□□ -0.09
VTI1BP2-201ENST00000394154 CNOT7Q9UIV1 285 aaKnown RBP14.46□□□□□ -0.09
VTI1BP2-201ENST00000394154 ADAMTS8Q9UP79 889 aa14.46□□□□□ -0.09
VTI1BP2-201ENST00000394154 DIAPH1O60610 1272 aaKnown RBP14.44□□□□□ -0.1
VTI1BP2-201ENST00000394154 DLK2Q6UY11 383 aa14.44□□□□□ -0.1
VTI1BP2-201ENST00000394154 IL17REQ8NFR9 667 aa14.44□□□□□ -0.1
VTI1BP2-201ENST00000394154 RTFDC1Q9BY42 306 aaPredicted RBP14.44□□□□□ -0.1
VTI1BP2-201ENST00000394154 USP16Q9Y5T5 823 aa14.44□□□□□ -0.1
VTI1BP2-201ENST00000394154 GNAT3A8MTJ3 354 aa14.43□□□□□ -0.1
VTI1BP2-201ENST00000394154 TCERG1O14776 1098 aaKnown RBP14.43□□□□□ -0.1
VTI1BP2-201ENST00000394154 RAD17O75943 681 aa14.43□□□□□ -0.1
VTI1BP2-201ENST00000394154 NOM1Q5C9Z4 860 aaKnown RBP14.43□□□□□ -0.1
VTI1BP2-201ENST00000394154 SLC51AQ86UW1 340 aa14.43□□□□□ -0.1
VTI1BP2-201ENST00000394154 NUTM1Q86Y26 1132 aa14.43□□□□□ -0.1
VTI1BP2-201ENST00000394154 MICALL2Q8IY33 904 aa14.43□□□□□ -0.1
VTI1BP2-201ENST00000394154 POLR2AP24928 1970 aaKnown RBP14.42□□□□□ -0.1
VTI1BP2-201ENST00000394154 SHTN1A0MZ66 631 aa14.42□□□□□ -0.1
VTI1BP2-201ENST00000394154 HLFQ16534 295 aa14.42□□□□□ -0.1
VTI1BP2-201ENST00000394154 RASAL3Q86YV0 1011 aa14.42□□□□□ -0.1
VTI1BP2-201ENST00000394154 DCPSQ96C86 337 aaKnown RBP14.42□□□□□ -0.1
VTI1BP2-201ENST00000394154 ATP6V0A2Q9Y487 856 aa14.42□□□□□ -0.1
VTI1BP2-201ENST00000394154 IBTKQ9P2D0 1353 aaPredicted RBP14.42□□□□□ -0.1
VTI1BP2-201ENST00000394154 BTBD11A6QL63 1104 aa14.41□□□□□ -0.1
VTI1BP2-201ENST00000394154 ADM5C9JUS6 153 aa14.41□□□□□ -0.1
VTI1BP2-201ENST00000394154 KIAA2012Q0VF49 1180 aa14.41□□□□□ -0.1
VTI1BP2-201ENST00000394154 RBBP6Q7Z6E9 1792 aaKnown RBP14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 CEMIPQ8WUJ3 1361 aa14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 U2SURPO15042 1029 aaKnown RBP14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 KCNQ3O43525 872 aa14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 TBC1D8O95759 1140 aa14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 SNRPA1P09661 255 aaKnown RBP14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 U2AF1L5P0DN76 240 aaPredicted RBP14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 KCNA4P22459 653 aa14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 U2AF1Q01081 240 aaKnown RBP eCLIP14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 INTS3Q68E01 1043 aaKnown RBP14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 SAMD7Q7Z3H4 446 aa14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 GAS2L2Q8NHY3 880 aa14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 DPF2Q92785 391 aa14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 PNNQ9H307 717 aaKnown RBP14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 ZBED9Q6R2W3 1325 aa14.4□□□□□ -0.1
VTI1BP2-201ENST00000394154 COL3A1P02461 1466 aaPredicted RBP14.39□□□□□ -0.11
VTI1BP2-201ENST00000394154 PRAMEF22A3QJZ6 481 aa14.39□□□□□ -0.11
VTI1BP2-201ENST00000394154 NBPF26B4DH59 902 aa14.39□□□□□ -0.11
VTI1BP2-201ENST00000394154 GPR25O00155 361 aa14.39□□□□□ -0.11
VTI1BP2-201ENST00000394154 NBPF10Q6P3W6 841 aaKnown RBP14.39□□□□□ -0.11
VTI1BP2-201ENST00000394154 DPP8Q6V1X1 898 aaPredicted RBP14.39□□□□□ -0.11
VTI1BP2-201ENST00000394154 COLQQ9Y215 455 aaPredicted RBP14.39□□□□□ -0.11
VTI1BP2-201ENST00000394154 NUP98P52948 1817 aa14.38□□□□□ -0.11
VTI1BP2-201ENST00000394154 POTEFA5A3E0 1075 aa14.38□□□□□ -0.11
VTI1BP2-201ENST00000394154 TBC1D10BQ4KMP7 808 aaPredicted RBP14.38□□□□□ -0.11
VTI1BP2-201ENST00000394154 SULF1Q8IWU6 871 aa14.38□□□□□ -0.11
VTI1BP2-201ENST00000394154 SLC17A8Q8NDX2 589 aa14.38□□□□□ -0.11
VTI1BP2-201ENST00000394154 PAPPA2Q9BXP8 1791 aa14.37□□□□□ -0.11
VTI1BP2-201ENST00000394154 YDJCA8MPS7 323 aa14.37□□□□□ -0.11
VTI1BP2-201ENST00000394154 ERVV-1B6SEH8 477 aa14.37□□□□□ -0.11
VTI1BP2-201ENST00000394154 FKBP1BP68106 108 aa14.37□□□□□ -0.11
VTI1BP2-201ENST00000394154 MPNDQ8N594 471 aa14.37□□□□□ -0.11
VTI1BP2-201ENST00000394154 RUNDC1Q96C34 613 aa14.37□□□□□ -0.11
VTI1BP2-201ENST00000394154 HTTP42858 3142 aa14.37□□□□□ -0.11
VTI1BP2-201ENST00000394154 FKTNO75072 461 aa14.36□□□□□ -0.11
VTI1BP2-201ENST00000394154 NGEFQ8N5V2 710 aa14.36□□□□□ -0.11
VTI1BP2-201ENST00000394154 CDCA5Q96FF9 252 aa14.36□□□□□ -0.11
VTI1BP2-201ENST00000394154 ZBTB12Q9Y330 459 aaPredicted RBP14.36□□□□□ -0.11
VTI1BP2-201ENST00000394154 SZT2Q5T011 3432 aa14.35□□□□□ -0.11
VTI1BP2-201ENST00000394154 EGFRP00533 1210 aa14.35□□□□□ -0.11
VTI1BP2-201ENST00000394154 RPS12P25398 132 aaKnown RBP14.35□□□□□ -0.11
VTI1BP2-201ENST00000394154 SP8Q8IXZ3 490 aa14.35□□□□□ -0.11
VTI1BP2-201ENST00000394154 CCDC146Q8IYE0 955 aa14.35□□□□□ -0.11
VTI1BP2-201ENST00000394154 NLRP3Q96P20 1036 aa14.35□□□□□ -0.11
VTI1BP2-201ENST00000394154 PSMD14O00487 310 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 BBOX1O75936 387 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 NEFMP07197 916 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 TM4SF4P48230 202 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 RBM26Q5T8P6 1007 aaKnown RBP14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 SUSD4Q5VX71 490 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 C3orf67Q6ZVT6 689 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 CFHR5Q9BXR6 569 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 GGA3Q9NZ52 723 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 ABCC4O15439 1325 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 MAP3K15Q6ZN16 1313 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 UBN2Q6ZU65 1347 aa14.34□□□□□ -0.11
VTI1BP2-201ENST00000394154 CENPFP49454 3210 aa14.33□□□□□ -0.12
VTI1BP2-201ENST00000394154 LAMB4A4D0S4 1761 aa14.33□□□□□ -0.12
VTI1BP2-201ENST00000394154 APAF1O14727 1248 aa14.33□□□□□ -0.12
VTI1BP2-201ENST00000394154 NTSR2O95665 410 aa14.33□□□□□ -0.12
VTI1BP2-201ENST00000394154 GPTP24298 496 aa14.33□□□□□ -0.12
VTI1BP2-201ENST00000394154 KIF4BQ2VIQ3 1234 aa14.33□□□□□ -0.12
VTI1BP2-201ENST00000394154 SREBF2Q12772 1141 aa14.32□□□□□ -0.12
VTI1BP2-201ENST00000394154 KIF6Q6ZMV9 814 aa14.32□□□□□ -0.12
VTI1BP2-201ENST00000394154 SALL2Q9Y467 1007 aaPredicted RBP14.32□□□□□ -0.12
VTI1BP2-201ENST00000394154 BRCA2P51587 3418 aa14.31□□□□□ -0.12
VTI1BP2-201ENST00000394154 DUOX1Q9NRD9 1551 aa14.31□□□□□ -0.12
VTI1BP2-201ENST00000394154 PPP1R42Q7Z4L9 355 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms